ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◣ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
LOC102724770
DGCR6
MAPKAPK5
CACTIN
POLR3F
DZANK1
NME6
NVL
PSMG2
CEP76
MAB21L2
TAOK3
SUDS3
S100A10
ZNF503
EXOC2
DYNC1LI2
VTI1B
IPO13
S1PR4
NCLN
PRDM6
VDAC2
HSPA9
RWDD1
FAM187A
EFTUD2
CCDC103
NUP85
DUX4
SP2
PDE4DIP
EXOSC5
BCKDHA
GATA4
IMPG1
RPL21
CCKAR
REXO1
DCTN1
HOXA1
HOXA2
SLC35B1
IFI16
PYDC5
TBCK
AIMP1
NUP205
POLR2E
GPX4
SRD5A1
NSUN2
BBS9
SEC61B
STAM2
MRPS7
MIF4GD
GGA3
STAM
RASL12
KBTBD13
ARHGEF10L
NTRK2
IER3IP1
C19orf48
TSN
ATP5MG
NNAT
BLCAP
GOSR2
UPF2
PES1
UBXN10
PLA2G2C
ACTR10
FRG2C
ZNF576
IRGQ
HADHB
HADHA
MYO1B
HOXB3
HOXB5
VARS1
SUPV3L1
PSMD12
MRPS5
SKP1
TSNAX
RBBP5
GOLGA5
PAK1IP1
C6orf52
LYRM4
FARS2
PNO1
ETFBKMT
ADAM18
FARSB
CAND1
DMD
HAND1
PCBP1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
MVB12A
BST2
SART3
ISCU
PI4KB
ERI3
RPL34
SMC2
RUNX1T1
TMED1
RABGGTB
PLCZ1
CAPZA3
KITLG
MRPL11
USP1
ZRANB2
PROSER1
NHLRC3
COX7A2L
SF3B3
COG4
CELF4
ADK
AP3M1
TBX2
METTL3
RBKS
BABAM2
ANAPC7
ICE1
TBX3
SFI1
EIF4ENIF1
LRRN4
RPS12
CD34
UFM1
CCDC33
SELENOF
HS2ST1
TM9SF1
IPO4
TSSK4
LAPTM4B
CAPRIN1
NR2F1
MOG
OBP2A
DNAJB7
XPNPEP3
ST13
HSPA1B
RTL1
RPS27A
CLHC1
MECOM
DPH6
PAF1
MED29
MEIS1
PDAP1
BUD31
RPL35A
IQCG
LMLN
LIN28A
PIP4P1
OSGEP
APEX1
GGCT
NTAQ1
PPP1R1B
TXNDC2
OR5K2
ELOVL6
CRABP2
PLAGL1
DDAH1
CCN1
SCRG1
HAND2
SIRT4
CLGN
SLC3A2
CCDC183
TMEM141
C6orf47
APOM
BAG6
ADAMTS8
LMO4
NUBP1
NFKBIL1
DDX39B
ATP6V1G2
VPS13A
PAEP
CXXC4
HOXC4
HOXC6
HOXC8
OR6B2
NDUFA10
COMMD1
CCT4
PRXL2A
KRTAP9-7
ERVW-1
FYB2
FRG2
NFIA
HEXIM2
KDM2B
NEO1
TAFA3
TEX9
RFX7
OAZ3
DIAPH3
CITED2
PDE12
STK36
RNF25
PLEKHG1
TMEM14A
PIN4
ARHGAP10
MGST1
MEIS2
PPP1R21
FGF5
SSH1
PDE6B
ZFHX4
LZTS1
HPCAL4
SUCLG1
ST3GAL6
HOXA3
HOXA4
HOXA5
MRTFB
KRTAP23-1
LIX1
OBP2B
CPA1
PAX3
HOXB1
POLD2
REEP5
MYL7
NXPH2
DMAC1
PRUNE2
OLFM1
C10orf82
DACT2
TNC
MME
GOLGA8K
ZNF608
UNC5C
SLC19A2
MELK
AKAP12
ASPG
BRINP1
MEOX1
CCR9
ARID3C
DCTN3
PPFIBP2
ZAP70
TMEM120B
GADD45A
HIP1
CATSPERG
POU2F1
ACKR3
POP5
NIBAN1
C8orf34
GPR84
FAM200B
KIAA1217
WT1
FLVCR1
SPATA45
PKDCC
SFRP1
CD244
TLE3
SERHL2
CNPY2
SNCG
MMRN2
FEM1B
EXOC1L
PTGES2
ACVR1
TXNDC16
KCNN4
LARP7
CYP26A1
MRTO4
EMC1
ITPRID1
RAPGEF3
SLC48A1
LYPD1
ARHGAP11A-SCG5
ARHGAP11A
METTL24
P2RX6
PLEKHF1
C9orf153
FAM72C
FAM72D
SEH1L
FAM205A
ZFHX3
SCMH1
CCDC200
RARB
ARHGAP19
HOXB9
GOLGA8H
COLQ
ZNF3
COPS6
ZNF587B
CADM3
FGF7
PPFIA2
TLE4
SMUG1
PPFIBP1
SEC11C
EIF3D
BNC2
SHOX2
RSRC1
GAS2
ZNF157
TMEM14B
CNR1
TAF9
RAD17
AK6
R3HCC1L
ARHGAP42
EYA1
SKIDA1
PACRGL
RBM20
PRTG
EGFLAM
PRR13
MXRA7
ARF1
EVPL
RPS29
LRR1
GPR82
KRT24
ARL4D
MAGEB3
MAGEB2
TRPS1
HES1
TNP1
ZGPAT
ARFRP1
RPL7
RDH10
TAF12
TYRO3
PGPEP1L
CDC42EP3
FOXP1
ZBTB18
ANKRD6
DMBT1
GPR19
GTF3C4
DDX31
ZBED5
JUP
ERCC1
NT5C3A
UBL4B
PKIG
SERINC3
IL6ST
SCHIP1
TMEM9
POLDIP3
FOXP2
NEBL
RERG
RPS24
POLR3A
MXD1
SLC22A5
SRP9
FXYD2
DSCAML1
SNX16
ZP3
RARA
RNASEH2B
CPA2
ASB15
SORBS2
CFLAR
SLCO2B1
RPS4Y1
ZBTB8OS
RBBP4
TAL2
TEPSIN
NDUFAF8
KIF4B
EMP1
HOXC5
TCF7L2
NEMP2
GLS2
COPRS
TPBGL
ABCC9
OSBP2
CREB5
C4orf54
TMEM107
COLEC12
TPM1
CDH18
FGA
GNG2
MAGEA11
GK2
FSIP1
SPIRE1
SKIL
PKNOX1
SYCP2
PPP1R3D
FAM217B
ZNF585B
ZNF383
NDUFV2
FLRT3
SPECC1L
RAB30
ZNF397
GUCY1A1
ATP1A1
CDH15
ACY3
MYLK3
JCAD
CDC73
CCDC73
SPTBN1
XPR1
GOLGA8T
ID2
CACYBP
NKX2-6
TMSB4Y
RPLP1
KDM3A
GATA6
FBXO34
ZNF367
KCNJ3
SLC17A4
AKR1B15
TFPI
ITGA3
DCAF4L2
SOX5
PHLDB2
CPHXL
RPN1
RAB37
SLC9A3R1
SALL4
CDH3
GABRB2
CSRNP3
PEDS1-UBE2V1
PEDS1
EPHA8
MYPN
TTI2
HOXD3
SYNE2
GFRA3
AKAP13
KLF9
PGLYRP1
IGFL4
KCNIP2
SPDL1
CS
HOXA6
CYP51A1
TBX4
NNMT
CACNA1D
SNAPC1
USP17L21
USP17L20
USP17L12
USP17L22
PRICKLE1
SACM1L
IL23R
PDZRN3
ASXL3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CD96
ITM2C
STX11
ZNF214
NLRP14
PLCH2
PMFBP1
GDPD5
GC
SLC2A9
TXNRD1
SEBOX
VTN
SARM1
SIGLEC15
CNTN1
COPZ1
SMIM14
CEMIP
GORAB
HLTF
USP34
CDK15
PDGFRA
KCTD7
REC8
NR4A2
VSIR
MGST2
CDIN1
IRS2
TLE2
TYRP1
EMILIN2
METTL25
CCDC59
ANAPC15
BTBD16
STRA6
RND3
EIF2S3
SMIM28
CSNK2A3
SVOPL
SMURF1
GPR20
HNRNPD
COMMD8
POLR2D
APBB1
HOXB8
HOXB7
COL5A2
PDHX
APIP
TUBB
MDC1
RASSF4
VANGL2
EXPH5
MIDEAS
SH3RF2
ENTPD4
WDR82
GLYCTK
PPIC
NRP2
NME1
NBAS
NQO2
CTNNB1
PLA2G2E
SLITRK6
RNF111
METTL7A
EFNA5
FGF8
NPM3
TGM2
TSSC4
CBX5
C1orf105
PIGC
PLN
SPRY1
ZNF746
NECTIN1
NDRG4
CAPN7
TBX18
MROH7
CEP70
EDNRB
ALKBH5
IGF2BP3
CACNG4
CRKL
KRT8
KRT18
GARRE1
UNKL
C16orf91
GADD45GIP1
CALM2
ALG10B
ELAPOR2
PDE7A
BOD1L2
EVX2
CCN2
ACVRL1
CACHD1
WDFY3
IL1RAPL1
ANKRD20A1
BDP1
TENM3
CLDN14
NDUFB3
FAM126B
SLC25A30
SAMD11
MMP28
DNHD1
ADRB3
C12orf50
C12orf29
FZD8
WDR74
STX5
ID3
RAPGEF2
YWHAZ
DUSP9
APP
HEY2
FZD2
CPPED1
FBXO40
DNAJB4
CHST9
TEX19
ANP32C
LIPC
HMGCS2
NPHP3
DPP10
SLC7A5
CACNG1
OPA3
DAZAP1
MRPL52
SLC7A7
CDX2
NOL4L
SOST
ST7
CLIP3
OTUD4
MEGF6
IRAK3
MMD
FYN
CARD10
PARD6B
LRRC36
THRA
MRPL39
TNFAIP8
TRIM65
MRPL38
NFIB
SEMA3E
CD74
AMOT
LCA5
BRD3
ZSWIM1
SPATA25
NEURL2
CTSA
ASB6
AGBL3
ECHDC1
SPRR2F
C3orf52
ESRRG
SPRED2
TNRC18
KANK1
MLIP
LOC100129484
GPC3
NELL2
SMAD7
RBMS3
MCF2
SEPTIN9
TCF4
PRR5
PRR5-ARHGAP8
MS4A4A
KLF12
HOXB6
ZNF644
DZIP3
CIP2A
HSPA6
LDLRAD4
MPPED2
RNASE9
AHNAK
CD177
SH3BP4
C6orf132
FAM81B
EAPP
PPP1R12A
RIPOR2
PCDH15
TMEM185A
CD28
GTF2H5
MAPRE3
PKIA
CDK20
LRIG3
IER5
HMCN2
IKZF4
NR2F2
SIPA1L1
ETV1
HOXA7
HOXA9
TLL1
FBXL4
FHL1
DCN
COL3A1
PLEK2
SMAD3
SHMT2
RCOR1
SFXN3
PDZD7
MRRF
HAPLN1
RAPGEFL1
PCBD2
NHS
TNFRSF19
MPDZ
MCF2L2
CCND2
CXXC5
HMX2
BUB3
RBP1
XRCC5
SLC5A10
SPRED1
UBE2I
DUSP6
RPS10-NUDT3
RPS10
MSX2
GRWD1
KCNJ14
TIGD4
ARFIP1
PHC2
ABLIM3
PFKFB3
GDF11
BHLHA9
SH2B1
LMOD1
TRIM24
CSNK1A1
NRG2
MGAT1
GDE1
CCP110
SYNDIG1L
ARSF
GFRA1
CD93
IL19
IGFL2
RAPGEF4
MCM5
LSM6
KRTAP13-1
KLHL2
INPP4B
AK2
NEDD4L
KIF2C
CSDC2
FAM89A
ZSWIM6
KBTBD8
SRI
DISP1
SSBP3
KCNMA1
ARHGAP8
STARD13
HTR1F
NAGLU
FAM72A
PPP2R5B
ATG2A
CFAP69
PGF
EPN2
SOAT2
IGFBP6
SHLD1
SLBP
BARHL2
DHRS3
ZNF285
BNIP2
FAM131B
ANKRD33B
ZYX
ALX1
XKR7
H2BC5
H1-4
EFNB2
SMTNL2
ANK3
BCL11B
MAML3
ZNF703
RAP2C
DHTKD1
OR6V1
FAM83F
SYBU
GPC6
TLCD4
USP17L13
PSPH
CCT6A
SRRM3
USP17L17
USP17L15
PKP2
NKX2-5
CDA
DMBX1
ZBTB40
DST
ATP1B1
NME4
FHL2
PGAP6
KIRREL1
ANKK1
GTF3A
FGB
MYOM2
CLCN3
NEK1
DMRT3
DLAT
MT1E
ATP2A1
ZNF77
LIG4
ABHD13
RBM25
KMT2A
MUSK
KRT20
COMMD10
PRRT4
OLFML2B
PTGIS
SCOC
PDCL3
DERL3
PCDH18
VIM
SNTN
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PSMB5
LRIG1
C6orf163
FAT2
CRY1
TTC24
IQGAP3
SLC30A4
FABP2
ZNF611
OVCH2
SYNPO
USP2
SPATA13
TBC1D5
WDR26
DNAH12
UGT2B11
DLG2
UBE2H
FGD5
MID1
SLC25A25
YTHDF2
STOM
AADACL4
LRRC8D
CBFA2T2
RARG
NINL
ZNF341
RANGAP1
CRK
SNX10
SYNJ2BP-COX16
SYNJ2BP
OTUD7B
GOLM2
SATB2
RNF150
LIG3
PRAC2
HOXB13
SASH1
PRAC1
GNGT1
ZNF813
SPIN1
TBC1D9
COX7A2
SNX8
ELF1
WBP4
USP17L11
USP17L18
USP17L10
GYS2
TPRG1L
ANKS1B
ID1
PDHB
KDM6B
FBXL18
ACTB