ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662636 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◣ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PGK1
SPATC1L
SP2
TEPSIN
NDUFAF8
RAB5B
PMEL
CDK2
ARRDC4
DOLPP1
DNM2
OSBP
ARHGDIA
P4HB
KATNB1
STIP1
ZNF687
NLK
UBE2C
TOP2A
SP1
TCERG1
GOT1
G3BP1
TDRKH
EVI5L
ACTL6A
ANKHD1-EIF4EBP3
ANKHD1
GLRX5
RFX1
STT3A
SLC34A3
TUBB4B
FAM166A
STPG3
HSP90B1
ARID4A
MAMDC2
DUX4
EIF2AK3
BAZ2A
ATP5F1B
PITPNM1
KAT7
AJM1
MAMDC4
SYP
PRICKLE3
PXMP4
HSPA5
SKA2
PRR11
HNRNPUL1
RFWD3
SHC1
FLAD1
CKS1B
TMX2
MED19
PRR14
FBRS
TMEM60
PHTF2
TOM1L2
DRC3
ZFYVE21
XRCC3
TMEM94
MVD
JUP
RECQL
GOLT1B
SNRPF
DROSHA
C5orf22
RBM27
TMEM70
ELOC
TEDC1
CRIP1
SPSB3
NUBP2
MRPS34
EME2
ARNTL
CIC
HNRNPC
LRRC45
CENPX
RAC3
H2AZ2
MSANTD4
TMEM218
NCDN
KIAA0319L
MPV17L2
ARMC1
ATP5MC1
YIF1A
TMEM151A
TRAF2
NPR1
ILF2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SULT1A4
SULT1A3
TOMM40
FAAP24
CEP89
WDR97
MAF1
CYC1
KAT6B
OS9
PRKACA
MTMR4
SEPTIN4
PWWP2A
KPNB1
MTMR12
PDK2
CNOT1
CORO1A
ZNF48
TBC1D10B
MYLPF
E4F1
PGP
BRICD5
XAB2
STXBP2
PCP2
GPR108
TRIP10
IMMP1L
ELP4
SLC25A41
KHSRP
COQ8A
ZNF77
AKR1E2
RPLP0
GCN1
TBCCD1
DNAJB11
FAM72C
FAM72D
SLC25A25
NAIF1
CAMTA1
SPAG7
HNRNPL
EEF1AKNMT
SARNP
ORMDL2
STAP2
MPND
FAM72A
CDC23
GOLPH3L
THRA
VIRMA
PSMD4
COPZ1
PROSER3
LIN37
HSPB6
HGS
ARL16
POU5F1
TCF19
CCHCR1
PPWD1
CENPK
MAEA
PPP1R3F
FOXP3
ZFYVE26
RAD51B
SLC39A2
METTL17
ANAPC5
YJU2
TICRR
PSPN
ALKBH7
DCTN4
WDR25
WARS1
SERP1
EIF2A
PHB
LRCH4
FBXO24
SSR3
NUMB
PKLR
FDPS
NFATC2IP
MTR
GPR84
ETF1
C16orf95
PITX3
GBF1
SEL1L
ARL17B
ARL17A
POLR2G
ZBTB3
CENPF
AGER
RNF5
AGPAT1
TMPO
RBM15B
MANF
DNAJC14
KDM4D
CWC15
SRP9
PRPF40A
ARL6IP6
TMEM217
TBC1D22B
HMGCS1
GATAD2B
MTFR2
ZNF695
LENG1
ANP32A
MNS1
ENSA
BCAS3
PANK2
VPS26B
NCAPD3
PNPO
PI4K2A
MORN4
FRYL
MSMO1
H4C14
H3C15
H3C14
H2AC19
H2AC18
UTP23
ZBTB32
MLH1
EPM2AIP1
FAM161B
COQ6
IARS1
ABHD2
AK2
HBP1
BIVM-ERCC5
POGLUT2
BIVM
RXFP4
KHDC4
DCUN1D4
RAD23A
CALR
FARSA
PRRC2B
CCDC77
NCBP2AS2
NCBP2
ZSWIM4
POC5
TCIRG1
NDUFS8
TARS2
CHCHD6
PPP1R12B
UBE2T
TTLL5
ERG28
ZBTB5
ZSWIM3
ACOT8
CNOT3
ZNF680
KDM4B
PSMB3
PCGF2
VCP
FANCG
SPTLC2
PAN2
IL23A
TSACC
CCT3
ECT2
RUBCN
ZNF785
WDCP
FKBP1B
UMAD1
UBALD2
BABAM1
TMCO6
NDUFA2
IK
TMEM160
BRIP1
RAB11B
HACL1
BTD
ZNF691
HMGCR
ANP32E
GLCCI1
MOGS
WBP1
INO80B
CBX5
HNRNPA1
MSTO1
STIL
RBM48
PEX1
MRPL34
DDA1
ABHD8
ZDHHC16
EXOSC1
GATAD2A
BRAP
ACAD10
FBH1
ANKRD16
TROAP
MTOR
IVD
GSK3B
NGDN
NUDT2
KIF24
SIN3A
CKAP5
MCCC1
CYTH2
HNRNPAB
STK40
UNG
ALKBH2
AP3M2
MYH10
DPAGT1
H2AX
HMBS
MTRR
FASTKD3
SIVA1
FRG2C
H4C15
ATP5PD
ZNF688
RWDD1
DDOST
RBM42
FAM126A
WDR89
MCM3
RPS20
PCNX3
MAP3K11
CCDC146
MAP3K3
SLC39A5
RNF41
NABP2
INCENP
CYCS
RAB4B
MIA
NUPR2
CHCHD2
H2BU1
H2AW
ISOC2
RGMB
FAM111B
NCOA2
GFM1
LTN1
SLC25A42
ALKBH3
CDCA8
C1orf109
ASF1B
THAP1
ACAP2
CDKN3
BPGM
SDHD
TLE3
FRMD5
IFI35
TXNIP
RPL27
WDR45
ZSWIM1
SPATA25
NEURL2
CTSA
ZMAT2
HARS2
HARS1
CFAP43
MCM10
NAT16
ZNF718
ZNF595
ZNF143
USF3
DDX49
COPE
CCDC200
PRDM10
LOC102724770
DGCR6
PODNL1
DCAF15
PAIP2B
CHD6
NDUFAF2
ERCC8
H3-3B
UNK
DDX39A
PLEKHA8
FKBP14
CCDC66
ARHGAP19
CANX
FAM72B
ATG9B
ABCB8
DICER1
GOLGB1
ZNF493
ZBTB26
RABGAP1
KANSL2
FBXO5
KCNAB2
PRADC1
CCT7
RPS5
RNF225
SLC33A1
TRAFD1
NRL
DCAF11
FAM156A
ZNF727
CDR2
IBTK
CD68
EIF4A1
STARD3NL
ABL1
TRAPPC6A
BLOC1S3
CLDN9
HDGFL2
SPAG8
HINT2
SYCE1L
MON1B
RBM15
TXNL4B
DHX38
SETD3
CCNK
ZWINT
CEP131
CYB5B
ATP7B
ALG11
TTC14
ZNF775
HMX2
BUB3
MRPS28
WBP1L
NUCKS1
NFE2L1
CYLD
SPRING1
RNFT2
GET3
SLC25A28
RAB3A
NEMP1
RPS26
IGSF9B
MFSD11
SRSF2
USP21
PPOX
AGFG2
SAMM50
PTMA
ZNF519
UBE2J2
RBM14-RBM4
RBM14
SCNN1D
RGS14
LMAN2
SPC25
MRPS30
FDFT1
HDGF
MRPL24
FAM53C
CDC25C
SECISBP2
CKS2
RTRAF
UVRAG
PPP6R3
PCLAF
TRIP4
SNRPE
DHX8
MXD1
TOM1
TNRC6B
PRMT1
PICK1
PMS2
AIMP2
POP5
YIPF4
PPP2R1A
EAPP
CNPY3
SLC25A19
TRAPPC6B
PNN
GLO1
UBP1
ZBTB6
RC3H2
OPA3
NUF2
CCDC130
LAPTM4A
KLHDC10
NDUFB3
FAM126B
RGL2
PFDN6
WDR46
CCDC61
HSD17B12
OXNAD1
DPH3
F11R
CGGBP1
ZNF654
TPRKB
DLGAP5
BRCA1
DCP2
BUB1
PDXP
ATPAF2
GID4
CNFN
INTS3
GGCT
GRK6
STXBP5
TOGARAM1
KLHL28
CST6
EIF1AD
BANF1
ZNF555
PABPN1
KRR1
GINS2
SPRYD3
SF3B5
CDC6
NUP107
RNF181
TMEM150A
ZNF574
VPS35
FCF1
AREL1
EIF3F
MTRNR2L8
PPP2R5A
TSKS
AP2A1
PCNT
C21orf58
LAS1L
NDUFB5
MRPL47
RRBP1
DPH2
ATP6V0B
B4GALT2
ESR2
TLE2
LCMT1
KDM4A
RTN4IP1
QRSL1
CDK5RAP3
ZSCAN20
ASPM
ERI3
PCBP2
PPP1R11
POLR1H
HLTF
RAP2A
CSTF1
AURKA
LINC02210-CRHR1
ZFAND2A
TYK2
ZBTB9
ZNF564
H4C12
H4C11
H2BC15
H2AC15
DUSP10
RAP2B
TCP1
MRPL18
MMACHC
TESK2
PNLDC1
TMBIM6
PEX2
H2BC14
H2AC14
H3C10
H2BC13
H2AC13
VBP1
SLIRP
ALKBH1
SIRT2
NFKBIB
VAMP2
PER1
DNAJB5
JPT1
LMCD1
TPRN
TMEM203
NDOR1
NME7
BLZF1
TNFAIP8L2-SCNM1
TNFAIP8L2
FAR1
SCNM1
LYSMD1
PSMA5
TMOD4
NOL6
CENPA
TMA7
CCDC51
ATRIP
PPM1B
PLXNB1
GINS1
TOMM40L
APOA2
ACTN1
GPR137
MFAP3
FAM114A2
CHCHD3
LETMD1
RUVBL1
GHITM
RPS24
POLR3A
ZNF141
RNF34
CDK5RAP1
PDIA4
MVK
ALG10B
FAM156B
EDEM3
C22orf39
INTS1
PA2G4
USP16
RWDD2B
UXT
ELK1
ENPP5
METTL25
CCDC59
KMT5C
PRCC
SOX4
SCAI
BBX
ANAPC15
LAMTOR1
RAB5C
FAM204A
LRIF1
KMT5A
SELENOH
CAND1
RAB6A
EHBP1
CREBRF
ZMYM5
INTS4
PHF14
PCYOX1L
TRIM68
CCDC116
PGBD4
EMC7
SDF2L1
PPP2R5E
KIF20A
BRD8
LMOD1
SLC2A8
NEU1
TIMM17A
GSTT2B
DDTL
DDT
GSTT2
PHF12
CDC20
ELOVL1
PPP1R36
HSPA2
WDR74
STX5
PIP4P1
OSGEP
APEX1
PNP
UBE2B
CDKL3
TPCN1
IQCD
SLC39A9
ERH
LSG1
LIN52
ALDH6A1
PMEPA1
ADAMTSL5
NUDT5
CDC123
MRPS23
BAZ1B
FAM117A
MBD1
CXXC1
FAM83D
H2BC4
H2AC6
ZNF724
PGAP3
ERBB2
DCAKD
NMT1
KCTD9
CDCA2
RBM4
USP42
FRG1
UBL5
PIN1
BLM
TSPYL2
COL23A1
HIBADH
SRPRA
HAGH
FAHD1
RABL3
GTF2E1
LIM2
C19orf84
OGFOD1
NUDT21
ZNF736
FRG2
AURKAIP1
LCA5
TFB2M
CNST
RLN2
PC
SAMD10
PRPF6
ATP6AP2
H4-16
H2AJ
MORF4L2
XRCC4
TMEM167A
CEP164
HMGB2
RLN1
RBM39
PNKP
AKT1S1
TBC1D17
RPL13A
RPS11
GSTO2
DBNDD2
ZNF556
STAT2
APOF
TMEM41A
MTA2
TUT1
TXNDC16
FAM222B
CENPM
EXOC4
CCND3
DGLUCY
RPS6KA5
TAF8
SELENOI
ADGRF3
MIA3
HMGB1
LARS1
OSCP1
C5orf51
IDI1
WDR37
FRA10AC1
PARL
SYNE4
LOC101927572
ALKBH6
TIMMDC1
FDXR
PARPBP
NUP37
PSMA3
H4C9
H2BC12
H2AC12
NUP214
FANCF
ETV5
STARD4
MAP11
LAMTOR4
PMF1-BGLAP
PMF1
PDCD6
OXLD1
CCDC137
CLNS1A
OTUD6B
C2orf42
RPL37
CARD6
HYLS1
CYB5A
PSMB7
MDM1
SCOC
GORAB
SON
GART
MED30
ARL6IP1
C12orf50
C12orf29
TULP3
DDX50
SASS6
IFT20
TNFAIP1
CD2BP2
ROMO1
KCTD16
YIPF5
FAM76B
CEP57
NRDC
MRPL16
KBTBD8
CFAP45
CSTF3
WDR53
FBXO45
SF3B2
GAL3ST3
SNRPG
FAM136A
MIIP
PPP2R5B
ATG2A
CSNK1G3
MZT1
BORA
DMXL1
MRPL11
TSR2
MPHOSPH8
TFAP2C
RRP9
PARP3
YWHAQ
TTBK2
NPAT
ATM
PAF1
MED29
EIF3M
PLPBP
OXSR1
STAT3
SLC30A9
DCAF4L1
TOB1
SNRPA
C19orf54
FNBP4
ZCCHC9
ZNF430
MAMSTR
VCPIP1
C8orf44-SGK3
ING1
CARS2
PGD
FAM111A
HSPA8
ZDHHC12
PTBP1
TTC33
DDX10
BORCS7
GTF3C5
VASN
ZNF774
WDR3
GDAP2
EIF3D
TAF1A
TMEM183A
ELAC2
RPAIN
NUP88
CCDC15
SLC46A3
HINFP
CRNKL1
CFAP61
ALDH3A2
ISY1-RAB43
ISY1
H4C2
H3C2
H2AC4
ANXA6
C10orf143
IL6ST
HJURP
TTI1
RPRD1B
WDPCP
MDH1
CDC45
UFD1