ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584304 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◣ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
LOC102724770
DGCR6
NEUROG2
TLE6
LARP7
RABL2A
NUP205
ZP4
POLR3F
DZANK1
PSMD1
NME6
NEUROG3
MAPKAPK5
DUX4
TBCK
AIMP1
MBTPS1
NVL
HSPA9
POLR2E
GPX4
NUP85
ARHGAP10
CACTIN
IPO13
ICMT
HES3
DYNC1LI2
ZNF503
NNAT
BLCAP
PES1
RWDD1
TAOK3
SUDS3
RPL21
FARSB
C19orf48
FAM187A
EFTUD2
CCDC103
VDAC2
GOSR2
PAK1IP1
C6orf52
MRPS7
MIF4GD
GGA3
VTI1B
S1PR4
NCLN
SART3
ISCU
ACTR10
DCTN1
PSMG2
CEP76
PNO1
PPP1R1B
SEC61B
SF3B3
COG4
HES1
EXOSC5
BCKDHA
SUPV3L1
UFM1
SKP1
TSN
RPL35A
IQCG
LMLN
ATP5MG
PCBP1
TSNAX
PSMD12
ANAPC7
UPF2
MRPL11
RPS27A
CLHC1
SLC35B1
STAM2
STAM
LYRM4
FARS2
DUSP29
NHS
COX7A2L
GLRA1
DPH6
REXO1
ZNF608
SRD5A1
NSUN2
CDX2
ZNF576
IRGQ
ZRANB2
HADHB
HADHA
TMED1
RPS12
RBBP5
TTC8
VEZT
FGD6
HSPA1B
SELENOF
HS2ST1
PI4KB
SMC2
FRG2C
CAPRIN1
MRPS5
FAM104A
C17orf80
DNAJB7
XPNPEP3
ST13
WNT1
ATOH1
PAF1
MED29
PIP4P1
OSGEP
APEX1
IGFBP2
NDUFA4
RBKS
BABAM2
URM1
SERINC5
VARS1
NBAS
LZTS1
SFI1
EIF4ENIF1
GADD45G
GOLGA5
INSM1
ADK
AP3M1
PMAIP1
CCDC33
MALRD1
PDAP1
BUD31
USP1
RPS23
ATP6AP1L
RABGGTB
ADNP2
PROSER1
NHLRC3
ZDHHC1
TM9SF1
IPO4
TSSK4
ICE1
NFKBIL1
DDX39B
ATP6V1G2
LEFTY2
G6PC2
NAV3
HOXA3
PTGES2
HOXA4
PHOX2B
IL17RD
KDM8
NEUROG1
SEC11C
BICRA
RPL7
RDH10
C6orf47
APOM
BAG6
CR1L
CERCAM
PIN4
ARF1
BNIP3
RPS29
LRR1
SUCLG1
CACNA1D
STK36
RNF25
SULF1
ST18
ARHGAP11A-SCG5
ARHGAP11A
TMEM212
ASXL3
TMEM120B
PAX6
RAB11FIP1
RFX2
ABLIM3
KRT20
MOBP
FAM222A
NR2F1
COMMD1
CCT4
CDX1
PPP1R1A
TAF9
RAD17
AK6
RHBDD3
EWSR1
DLL4
OAZ3
FZD8
ETS1
SLC10A2
CHODL
OR6B2
NDUFA10
NEUROD1
TPM1
RIMKLB
EPHA5
PANK4
HES5
CLDN2
PAH
ASCL1
PRUNE2
TCF7L2
TTYH1
LRATD2
CPSF4L
SOAT2
IGFBP6
CNTN1
UBE2I
NCOA7
DMBX1
FRG2
UNKL
C16orf91
ARID3C
DCTN3
SALL1
TPRA1
RPN1
CDC42EP2
GADD45GIP1
NUTM2D
ADAM18
GORAB
HOXB1
HOXB3
HOXB4
SCGB1A1
SMC6
GEN1
ZNF585B
ZNF383
PDE6B
MUSTN1
ITIH4
HOXD3
HOXD4
ERRFI1
RBBP7
PRRX1
TBC1D8
PSMB5
SPACA1
PDE12
DDAH1
CCN1
WDR59
SKIL
TESC
CDH18
ME3
RAI14
DLX4
GAD2
HNRNPA3
NOTCH2NLC
NOTCH2
SYBU
MRTO4
EMC1
FXYD2
DSCAML1
DIPK1B
USP29
HHIP
FKBP1A
FJX1
TIGD1
EIF4E2
C8B
OR10AC1
ECEL1
PDHB
HOXA1
HOXA2
ALKBH5
DUSP6
CNPY2
FGF19
GTF3A
HES7
ALOXE3
METTL24
PLAGL1
UNCX
KDM2B
PCBD2
NEK3
FOXA2
SALL4
AQP6
ZNF746
KIF26A
PDHX
APIP
EIF2S3
CADM3
HNRNPA2B1
CBX3
ZFX
DEFA5
PTGR1
RBPJ
GATA6
CATSPERG
HSPA1L
HSPA1A
GPR20
OTX1
EVA1A
LAMA4
FAM214B
STOML2
PIGO
CBFA2T2
LHPP
KRT16
ARL4D
ADGRL2
COL17A1
SNAPC1
MUC20
RPH3A
ZGPAT
ARFRP1
ASB6
REV3L
STRA6
FABP7
TMEM107
CDON
PDPN
TMSB15B
HOXB8
HOXB7
HOXB6
EIF2S1
ATP6V1D
ANK2
METTL11B
NOXO1
ZADH2
TSHZ1
KLF17
SYNGR3
GFER
B3GALT5
GTF3C4
DDX31
AXDND1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
GFRA3
CYP51A1
LRIG1
TMEM14A
TLE4
BFSP1
PPP2R5A
MDFIC
MYO10
TTC13
ARV1
CLGN
CAMTA1
GNAI1
ZFHX4
TRIM65
MRPL38
MBNL3
THRA
RPS24
POLR3A
HNF1A
VOPP1
FOXP1
ALDH1A2
NRXN2
REC8
SNCG
MMRN2
CLMP
ZNF214
NLRP14
FOXB1
H2BU1
H2AW
GNB2
ACTL6B
KLHDC8A
ID1
HOXC6
HOXC5
CXCL12
CDH16
NFE2
KCNN4
CCDC200
CNTN4
DHX32
TMPPE
GLB1
KIAA0895
OPLAH
FRMD7
UBR2
PPFIBP2
ADM
RARB
LIG3
LRGUK
MSX1
LBX1
P2RX6
RIPOR2
MEIS3
MEIS2
SLC35E3
GUCY1A1
STK38
DDX3X
LIMCH1
LIN28B
SOX6
PCDH11Y
TPST2
C8orf34
NEK7
ABCB5
PAX3
TEX30
TLE3
HOXA5
AGO1
HOXA6
POU3F2
LOXL4
PALM2AKAP2
ITGB6
LRIG3
LRRC4
TLN1
CREB3
ALOX5AP
DTX4
CPLX1
CD99L2
CPN2
WDR74
STX5
CLDN11
DAAM1
TRABD2B
TPH2
SOX21
CSTF2T
TCF4
QPRT
FREM1
EIF4E3
PANK2
ZNF367
H2BC17
H2AC17
H3C12
CDCA7
RARA
TMA16
RGS12
SH2D3C
BNIP2
SCARF2
USP17L21
USP17L20
USP17L12
USP17L22
GDNF
ARHGAP24
BRWD1
HSPB8
C5orf63
PLEKHA5
PAX8
PJA2
DHRS4L1
GAS1
DAPL1
TDG
C12orf73
DLG4
ACADVL
ADO
PNKD
SOCS3
TTLL6
SMARCA2
NR4A2
PRDM12
PCBP4
CD82
GPR62
THEMIS
SLC44A3
TTI2
SNX1
CIAO2A
NEDD9
FAM107A
NELFA
MSI1
MAMDC2
MTRNR2L1
MTRNR2L2
MSH3
DHFR
EAPP
DHRS3
MTRNR2L8
SP2
ARID3B
CYP26A1
SPATC1L
ID2
CDC73
IER3
FLOT1
PDE4DIP
ZNF775
NDUFS7
ZSWIM1
SPATA25
NEURL2
CTSA
SH2B1
DPP9
KAT6B
TBL2
SEC22B
ERCC1
GPR108
BBS9
BHLHE40
TRIP10
PCGF1
SPCS1
GLT8D1
VSIR
RUNX1T1
LBX2
ARHGDIA
LIN28A
TBX3
P4HB
TLE2
PHC2
PPP1R35
MLEC
CDCA7L
ASB2
TEPSIN
NDUFAF8
LPIN1
NBEAL2
CCDC12
ANKLE2
DNM2
TBX2
COL23A1
TAF12
CITED2
S100A10
SLC39A7
RXRB
HSD17B8
PPP6R3
HOXC4
CRYAA2
CRYAA
SP1
FBXO31
SYTL3
HPD
MINDY2
SP5
CS
FILIP1L
EXOC2
HUS1
MAP1LC3B
TMEM70
ELOC
ANKRD28
FRA10AC1
COL11A2
RPS10-NUDT3
RPS10
SYNPO
SMAD3
HPCAL1
NFIA
ZFHX3
KIF21B
PKDCC
BAZ2A
ARSG
RPL22
RNF207
XKR7
STX18
NPAS4
E4F1
RAB5B
PMEL
CDK2
ID3
CHN2
STAP2
CRABP2
TLE1
TNFRSF19
ARHGEF28
TMEM242
MRPL34
DDA1
ABHD8
PDE4D
CPVL
DOLPP1
OTUD7B
KDM6B
BAIAP2
KANSL3
FER1L5
ARRDC4
GPC6
PGK1
SEPTIN9
DONSON
VIP
UPF3A
DYNLT1
ETAA1
ATP5F1B
FOXP2
MAB21L2
POR
ATF6
FRYL
SMPDL3A
POP5
JUP
PDZRN3
SH3BP2
ARHGAP22
PC
CERK
EXOSC4
KATNB1
KCNAB2
BCL3
MRPL20
MYLK4
PPCDC
TRIB1
NINJ2
RARG
PTK2B
BMF
CCDC174
IRF2BP2
FAM72C
RHBDD1
SNX16
SQSTM1
CLCN3
TMEM101
CCNL2
ABHD2
SREBF1
GPCPD1
SRSF11
ADAP1
RING1
SMARCD2
GATA4
SIRT4
NOTCH2NLB
NOTCH2NLA
MFSD10
MTMR4
PRKAG2
MIDEAS
ELOVL5
TOP2A
ABCC10
HEXIM2
TMEM9
SLX1B
SLX1A
LFNG
BOLA2B
BOLA2
ZNF687
SMG6
ZNF718
ZNF595
NBPF1
ZFP36
PLEKHG2
SACM1L
PSMB3
PCGF2
SLC2A9
CNOT2
TRIM46
KRTCAP2
RASSF5
NRL
ATP1A1
NOL4L
CALM2
FURIN
MUC3A
MRPL3
SPG7
KAT7
RNF34
PCNA
RABGAP1L
MRPS31
EIF1B
CBX5
INHBE
GLI1
ANGPTL4
PSPN
ALKBH7
DACT2
RPL34
TLX2
DLC1
PPP1R18
NRM
SMIM28
RFX1
LRRC40
KAZALD1
ITGAV
C9orf92
ARHGAP30
THOP1
SGTA
POLDIP3
NUBP1
HNMT
NFKBIA
RHOQ
ATP6V1E2
TRAF7
EIF2AK3
FAM72D
ZFAND2A
STIP1
OSBP
SHC1
GRIK2
STAT1
PRDM10
RNF103-CHMP3
RMND5A
RPS7
DNAH1
ZNF77
SKI
ZNF740
DCAF11
CSAD
SHF
TRIM7
ATP1B1
MYBPC3
PSMD6
RAB26
SSBP4
RPLP1
STARD13
TRIM26
HAND1
KNL1
ARRDC2
CDS2
IQSEC3
SEPTIN4
ZC3H3
SOD2
TRIM41
SERPINE1
ACYP1
PXYLP1
NR2F6
AHDC1
BRMS1
GADD45A
MDM2
GOT1
ECE1
SLC45A4
CCL26
RAB37
KMT5A
BORCS6
LPCAT3
HMGCS1
CAPNS2
IKBKB
CAPG
TNFAIP2
SLC34A3
ZNF285
RGS3
CSF3R
DLG2
TCP10L
SPRED2
NLK
EMP3
SMIM20
TRIB3
POLG
TPCN1
ZNF564
CBX4
LMOD1
ANKHD1-EIF4EBP3
ANKHD1
STX1A
RTN4
FTL
PDP2
LMO4
NCOA2
BAHCC1
ART1
TCTEX1D4
PLK3
BTBD19
RAB11B
G3BP1
SOCS2
COL21A1
B4GAT1
MYRIP
GLRX5
MACROH2A1
SLC35E2B
GRSF1
SH2D6
ZNF827
CRLS1
MBD6
DDIT3
SLC7A5
ZC2HC1C
RBFOX2
HTR1F
NEK1
METRN
FAM107B
HNRNPD
SYNJ2
MYEOV
KBTBD11
MNT
MSX2
SCHIP1
CORO1A
ELL
TMEM94
MOB3A
IZUMO4
RBM15
NHLRC1
GMEB2
MIDN
ARHGEF3
IFI16
JUNB
CNPY3
METTL3
MTF2
FST
PKN2
SIT1
CCDC43
PRMT5
KDM3A
ANTKMT
CNKSR3
DAGLB
UBE2F
PLA2G2A
CTSW
EIF3D
WSB2
INAVA
UNC5A
LCK
FAM167B
NKD1
ARID5A
ETF1
CSNK1D
MPND
SORL1
MRS2
SHB
KIF5C
BCAR3
SLC25A25
SLC6A12
CLDN9
PYGL
IGFBP7
SLC19A1
NCDN
KIAA0319L
KIAA1549
MRPS28
FGR
UBC
PPFIBP1
NKX1-1
TXNRD1
SCARB1
ZBTB18
SH3BP1
INKA2
CMSS1
ARID2
LRRC45
CENPX
NAGLU
TACC1
SLC30A4
LINGO1
PLEC
TUBA1C
KLF16
ARAP1
PCM1
MMD
ATP6V1G3
ABCA4
HNRNPL
COX5A
SH3YL1
ACP1
METTL26
SORBS2