ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671312 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SNAPC1
EAPP
MAMDC2
WDR74
STX5
MTRNR2L1
DUX4
KNL1
BRMS1
B4GAT1
PPP6R3
SACM1L
ZBED9
SHF
BCAR3
DPP9
PRMT5
LUC7L2
FMC1-LUC7L2
FMC1
H4C8
GSTA4
TRIM7
TTI2
BORCS6
FBXO31
MAP1LC3B
C8orf37
SIT1
CCDC107
ARHGEF39
FCGR3A
NDUFS7
FRG2C
RPS29
POLG
SNX16
POLR3E
UBC
HSPA6
ART1
COL23A1
HMGN4
H2BC17
H2AC17
OR2B2
MPZL1
RNASE4
ANG
ELF1
WBP4
TAF12
PSMA3
TIA1
PCYOX1
NPR1
ILF2
TRIM41
IRX2
C5orf38
METTL26
WFIKKN1
MCRIP2
VSIR
LTA4H
DDIT4
NCOA7
PSMB3
PCGF2
CASC3
NEMF
RAB11A
TMEM242
OR1F1
ZSCAN22
TMEM107
TMEM259
CNN2
MDM4
POLDIP3
FRG2
SMARCC2
PLXDC1
TPCN1
FCGR3B
CCDC136
OPN1SW
DHRS3
IER3
FLOT1
ZNF184
MTRNR2L2
MSH3
DHFR
TBL1X
CFAP45
CREB5
PXK
HES7
ALOXE3
LOC102724770
DGCR6
PARP16
OSGIN1
PPEF1
RS1
STAT6
MAT2A
MED16
ANGPTL4
ID1
ZNF839
ABLIM3
ANP32E
PHRF1
SAR1B
PCLAF
TRIP4
LASP1
MTERF4
ZNF827
YARS1
S100PBP
SIRT4
STX16
RPL37
CARD6
MYC
CSRNP1
OPA1
WDR36
METTL15
KIF18A
BZW2
ANKMY2
OR6S1
MYNN
ACTRT3
MTF2
ZC3H10
RPL41
CDCA4
ACSL1
NOP53
H4C12
H4C11
H2BC15
H2AC15
MUC3A
NFE2L2
HIF3A
GOT2
SLC44A1
SELENOH
FRA10AC1
SLC25A45
FRMD8
PARP2
CCNB1IP1
ZNF285
TRDMT1
H4C14
H3C15
H3C14
H2AC19
H2AC18
BCL3
RAD54L2
SUSD2
ZMPSTE24
EIF4G2
MNAT1
DCP1A
H4C15
ADAMTS9
SREK1IP1
CWC27
HSPE1-MOB4
HSPE1
HSPD1
PTPN6
C12orf57
NME1
FAM227B
DTWD1
FBXO4
CCL20
NDUFC2-KCTD14
NDUFC2
MMP8
GBA
DNAH14
MKRN3
JUNB
NUF2
MAFK
H3C4
H4C4
H2BC6
GTF2H2
SF3A3
OR2T1
ARL2
PHC2
TRIAP1
COX6A1
BCL2L1
ABT1
ZFP36
PLEKHG2
MRPL40
HIRA
NDUFA12
OR2V2
STX1A
SERPINE1
ZNFX1
C11orf49
ATF3
LRRC59
SLC38A2
MRPL21
IGHMBP2
FUS
PSCA
LY6K
R3HDM2
INHBC
MRI1
C19orf53
SOAT2
IGFBP6
FAM180B
NDUFS3
KBTBD4
TMEM248
MTHFD2L
PTPRH
ZSCAN9
MTRNR2L8
DRD4
TPK1
H3C13
H2BC18
TEX46
KDM1A
ARID5B
TNFRSF10B
MRPS17
KIF2C
NSUN4
SNX17
EIF2B4
PTPRM
KLF9
GTF2H2C_2
GTF2H2C
FOXN3
NUP54
UBE2H
EPB41
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
CALM2
RBFOX2
H4C3
H1-6
OR14K1
OR14A2
ZFP36L1
INTS12
GSTCD
EREG
RPL23
H3C6
H1-3
H4C6
SRP14
HSP90AB1
CYP20A1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KLRC3
STUB1
WDR24
JMJD8
ELOVL3
TLR4
MED23
UTP3
RPS2
RNF151
TOP3B
RPL3L
NDUFB10
ARID2
PHLDB2
GYPC
BBS1
TUT7
PLK2
ART4
ROS1
NOTCH2NLC
TRIB1
NOTCH2NLB
NOTCH2NLA
ZNF219
TMEM253
TACO1
EGFLAM
GTF2A1
CFLAR
LPP
LTN1
NACA
RIN3
PTPN21
MLEC
MFSD11
SRSF2
PLIN3
HPD
MYBPC3
HMGB1
USPL1
PSMD9
TMEM190
TMEM238
RPL28
SLC9A1
NXF1
CEBPB
CDKN1C
GADD45A
TMEM167B
SLC33A1
KLRC2
NDUFS4
BSPRY
WDR31
RAB30
ZNF207
C17orf75
HES4
UBE2D3
SNAI2
PRLH
PSMF1
NABP1
PLD1
DRAP1
C11orf68
KLF7
GTF3C3
C2orf66
CXCL8
PDE4D
MACC1
LPIN3
DR1
MRPL35
IMMT
PSMD3
SLC27A4
DUSP1
H2BC5
H1-4
RPL10A
NET1
SCNN1G
HTR5A
DUSP10
JUN
CXorf58
MCTP1
TMEM262
SEC11A
FOSL1
CCDC85B
PCBP3
CCDC9B
CHD1
FIBP
TBC1D19
PHGR1
BHLHE40
RPS7
H4C5
H2BC7
H2AC7
IL16
ZSCAN30
TRIM69
UBAC1
H2BC14
H2AC14
GADD45B
TATDN3
NSL1
RBBP5
CLCN3
SPRED2
NEK1
SRSF7
BIRC3
KRT31
MTERF1
PPA2
TRIB3
IL1R1
TARS2
STK17A
EIF3M
USP17L21
USP17L20
USP17L12
USP17L22
EIF4A3
ZBTB40
CCNC
LIG3
FAM107B
TUBGCP3
CDC14B
MRPS31
GMEB2
PCMT1
ZNF460
SAV1
PDE4DIP
SRP9
HCAR2
LURAP1L
PSMD12
STK40
CDKN2AIPNL
PCMTD1
UNG
ALKBH2
POLE4
PSMC2
DNAJC2
CCDC85A
FOXJ3
TBRG4
CCAR2
C8orf58
SNAP47
JMJD4
CCDC200
RTN4
SCNN1A
LTBR
ALOX5AP
SMIM3
LIMS1
MRPS18C
HELQ
KRT6A
PHKA1
LOC100509620
DCAF10
PPP1R11
POLR1H
THAP9
SEC31A
MGST1
TMEM158
CCNL1
TOB2
CDC42
PRRT3
RXRA
NEDD4L
GBX1
ITGB5
SUMF2
LARS2
RPL27A
RPL35A
IQCG
LMLN
SOD2
WTAP
ZNF770
TAMM41
CCN5
MAP4
ZWILCH
SNAPC5
RPL4
EIF3B
SAMSN1
PAQR5
MRPS14
ARHGDIA
P4HB
LPIN1
PRKAG2
NDUFAF5
ESF1
NTSR2
DPYSL2
C1QTNF1
POLR2J3
ATF4
NSFL1C
GABARAPL1
PHACTR4
BLOC1S6
IL1A
KANSL3
FER1L5
S100A2
MRPL39
POLR3B
RPL26
KRBA2
DCAF8
DEF6
HIP1R
INSYN2B
FAM72C
FAM72A
TRAP1
PCID2
CUL4A
BTG1
SNX14
ASB2
HNRNPAB
TRIOBP
EEF1A1
NFAM1
SNX8
H1-2
H3C10
H2BC13
H2AC13
ITPRIP
DMAP1
THOC3
AGK
HOXA3
HOXA2
ERCC1
H3-3B
UNK
NUP107
TNIP1
PISD
RPS6
SLC30A5
LRRK1
PTPRE
AQR
POMK
PSG1
PIKFYVE
MEIS1
COPS7B
DPY19L4
GTF3C5
PDE6D
C8orf33
ZKSCAN4
NKAPL
UCHL3
COMMD6
SETD7
PFN3
ASH1L
F12
EPRS1
SUGCT
MPLKIP
ISL2
MICALCL
COMMD2
GNAI2
DNAJC11
RANBP2
CCT2
PEBP4
WSB2
ZBTB45
SLC27A5
ZBTB20
SSNA1
ANAPC2
SPRYD4
TEFM
ATXN2L
MBTPS2
MDH1B
FASTKD2
ARID3B
ASNS
TGOLN2
LOC644090
SLC16A1
PCNP
C12orf66
ZC3H12A
NMRAL1
HMOX2
WDR97
MAF1
CYC1
STMN3
RTEL1
PDXK
FAM43A
WDR70
NUP155
ERRFI1
CLDN16
HEG1
MRPL22
GEMIN5
RGPD8
RGPD5
RGPD6
GOSR1
MAPK9
STEAP2
PSG11
NKIRAS1
SLC24A1
TBC1D16
GNL2
RPL15
ANXA5
ARRDC1
AARSD1
EHMT1
MRPL1
COQ2
SLC35A3
CLUAP1
C16orf90
ATP5MC2
SGCA
NCF4
SMCO2
CXCL3
STN1
PFKM
ADGRG6
SENP1
NPIPB9
IMPACT
ATP1A1
IFI16
NMNAT1
LZIC
MET
RTP3
LTF
PWP1
PYROXD2
EXD2
KPNB1
MRPS15
POLR2C
CPNE7
HAGH
FAHD1
TTC4
ZNF843
NT5DC4
PPP1R35
ZCWPW1
MEPCE
FBXO22
IGFBP1
UBE2V1
SLC22A15
RAET1E
STMP1
NOCT
SLC16A7
DSTYK
LSG1
VPS52
RPS18
B3GALT4
PSG4
RPS5
MUC5AC
TMEM68
TGS1
CAMK2D
CSF3
MRPL44
PSMB2
RNF223
AXL
TNS4
THSD1
CENPP
MAML3
NOL8
SSBP1
THOC1
LRP12
NOL7
SOST
GGA2
NUFIP2
TBC1D22A
WDR11
ATL1
MAP4K5
TAS2R60
H3C8
H2BC10
TNFRSF1B
MPHOSPH10
MCEE
WASHC2A
CPEB2
PLAT
MIDEAS
CDK6
ZBTB38
BCL9L
METTL9
FZR1
DOHH
BORCS7
ERCC6L2
SH2B1
TES
NDUFV1
EIF2D
CELSR1
COX16
TIMP2
RUNX1
CALM1
RPL13
SFPQ
TMEM223
TMEM179B
PCCB
ZNF622
CLN8
ADGRF5
MRPL20
CCNL2
METTL25
CCDC59
ANXA2
INTS5
GANAB
ARL8B
CTF1
BCL7C
RINT1
PUS7
H2BC21
H2AC21
H2AC20
BDKRB1
TOMM7
CERS2
ANXA9
LAMTOR5
ETV1
RRAD
CIAO2B
CES2
MBP
SLC16A5
RCAN1
RPL5
EGFR
NR1H3
ACP2
PMPCB
CAAP1
MRPS35
TRIM60
IARS1
EIF2B5
SLC17A3
ENKUR
ZFHX3
CELSR3
SLC39A13
FAM162A
CCDC58
RFFL
ITPKC
COQ8B
SDHA
CCDC127
CALCB
NOXO1
RPL17-C18orf32
RPL17
C18orf32
TBL3
TOMM5
HMG20B
GIPC3
PLEC
CCDC88B
CEMP1
FAM53C
CDC25C
SNUPN
PDPK1
GDF15
PARL
RNF14
HINT3
RRN3
SNRPD1
RTTN
AHCTF1
METAP1
TM4SF19
MRPS16
DNAJC9
SUCLG2
ACTN1
GRPEL1
NUGGC
ELP3
CTNNB1
HERC3
PYURF
PIGY
PRDX1
HNRNPA2B1
CBX3
DEPP1
C5orf51
CTSC
USP8
ADAD2
ZNF205
RHCG
STX10
IER2
PTP4A2
PHB2
NANOS3
ADNP
HNRNPD
KCTD5
MT2A
LRRC37A3
RNF138
YWHAZ
CCDC125
OR4E2
OR4E1
PARK7
SPOP
WNT9A
MRRF
ZG16B
H3C7
H2BC9
H4C7
PAQR8
TMA16
ERI1
PIM3
KIAA1958
C9orf147
NRF1
DHDH
PCBP2
NANS
S100A6
S100A5
CCDC80
ROR1
GABARAP
PHF23
DVL2
NDUFA4
PCDH1
RPS27L
FUT8
BNIP1
LTBP3
FITM2
R3HCC1
RHBDL1
RHOT2
POMP
RBM14-RBM4
RBM14
RARS1
CD5
CCDC174
DLX2
CLCF1
DLX1
KIZ
DNAJC10
SNF8
F2RL3
SCAF11
NUP214
NT5C
ATXN2
ARID1A
GPC1
KRT80
SLC7A11
PKN2
IL1RAP
USP53
SLC38A1
SEPTIN7
MFN1
LMTK2
CARNMT1
ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
POLR2E
GPX4
VDAC2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
MRPS7
MIF4GD
GGA3
NUP205
HADHB
HADHA
RPL21
REXO1
S1PR4
NCLN
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
NNAT
BLCAP
DCTN1
TSNAX
STAM
SLC35B1
ATP5MG
TSN
STAM2
SEC61B
FARSB
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
UPF2
SKP1
ZNF576
IRGQ