ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607665 | NTERA-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◣ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

H2BU1
H2AW
ZGPAT
ARFRP1
CRYAA2
CRYAA
KIF21B
ADCY1
SCARB1
LMOD1
SKIL
MUC20
ATP6V1B1
CYP26A1
CARM1
MAMDC2
LFNG
GJB6
LRRC20
MINDY2
METTL11B
FAM222A
VIPR2
MAP3K6
FCN3
MDM2
NR2F6
DRD4
SH2B1
KCNF1
LEFTY2
INHBE
GLI1
CYP1A1
OTP
ZNF740
CSAD
CADPS
CRABP2
LINGO1
MACF1
CPLX1
SERPINB9
N4BP3
SOCS3
VPS4A
METTL26
WFIKKN1
DUX4
SOX1
PKNOX2
KCNN4
AGO1
HOXB1
SPRED2
HECTD4
TAGLN2
FBXO41
EGR4
USP3
ARHGAP30
JUNB
PRDX2
CDKN2C
CRLF1
TMEM59L
FOXL2NB
FOXL2
ITM2C
PCTP
SNCG
MMRN2
LHX4
RPS8
HPD
PDE12
ZSWIM1
SPATA25
NEURL2
CTSA
BMF
ERCC1
SLC12A9
EPHB4
C16orf70
NODAL
KCNQ4
RHOC
MAPKAPK2
EVA1C
CPE
GBX2
SPACA6
CLDN2
NUP210L
DLX5
LEFTY1
ATP6V0A4
NECTIN4
LZTFL1
SPRYD3
NFASC
LTBP3
SPN
ITGB2
EVPL
FAM207A
PCGF1
LBX2
TLX2
FAM110D
NAPSA
GPR20
EXTL1
CCND3
KLF16
SERPINF2
ADAM11
GATD3B
GATD3A
MAP11
LAMTOR4
KMT5C
TPRA1
PANK2
PLEKHA6
BRI3
FGF6
CHN2
CPVL
TMEM88B
VWA1
PCDH1
BIRC7
TRIM56
ASB6
CCL26
PKDCC
AFMID
PHC2
CARD14
BTG2
OLFM4
KCNJ4
LOC102724770
DGCR6
FSCN1
ZBTB38
ADGRA2
TCTEX1D4
PLK3
BTBD19
MACROH2A2
RBKS
BABAM2
CERCAM
DUSP4
CXCR5
TREX1
SHISA5
MIDEAS
GPR35
LAPTM5
HPDL
MEGF9
SFXN3
PDZD7
SUSD3
LINGO4
METRN
ANTKMT
CCDC78
ZNF746
EPHB3
TLN1
CREB3
ARHGAP33
HAP1
CDX1
MMP11
CHCHD10
C22orf15
KLHL26
SERPINB6
CSRNP1
ARRB1
IGFBP5
ARRDC2
SH2D6
TRAPPC3
MAP7D1
MS4A4A
PAX7
LDB3
TNC
PRELID3B
GPC6
MUC3A
SOAT2
IGFBP6
SSTR5
UTS2R
KCNJ10
WDR18
HEY2
FOXK1
SIM2
MTF2
TRIOBP
MYRF
DYSF
GAST
RD3
CD2
AHSP
PDE2A
ZFHX3
SRCAP
LOC730183
MDK
SH3BP2
RNF224
RNF208
CYSRT1
GALNT2
PRSS47
LOXL1
APOBEC3G
CCDC120
FBLN1
RIC8B
RARA
WDR81
TLCD2
SOX5
PPIA
RHOF
SETD1B
DIPK1B
PSMG3
HUS1
PMF1-BGLAP
PMF1
DPEP2
DPEP3
PDE6B
TNF
LTA
NDUFS7
CHRNB3
MYEOV
AHDC1
TCF7L2
TPPP3
TRIL
TLE6
WBP1L
ATP1A4
DHDDS
PRKCZ
NHLH1
APOBEC3D
APOBEC3C
PIK3CG
CRB2
HOXC4
CDC42EP2
TSPAN18
CFAP20DC
NRSN2
FBLN2
CRHR2
NBPF15
SHANK2
CDC25B
CCDC149
OTUD7B
SNX16
DNAH1
C1orf167
CASD1
YPEL3
TBX6
IGDCC3
LOC105376731
ACKR2
HIGD1A
SOCS2
SCN5A
GUCA2A
RASSF7
LMNTD2
NR2C2
ADM
AMDHD2
ATP6V0C
NFE2L1
ANXA2
FGFR1
NR2E1
DYNLL1
LHCGR
TTYH2
KRBA1
STRA6
SH3PXD2A
CRYBG2
LIF
TLE1
ACYP1
ZC2HC1C
ORAI2
CNR1
RCC1
MRPS2
C9orf116
RUNX1T1
BFSP1
MLPH
SEC22B
SERPING1
SMIM35
DONSON
MNX1
PPP1R35
ATN1
CELSR2
ENO2
CCDC33
KRT24
SH3D21
OTOF
FAM166C
POLR2H
CLCN2
TMEM210
LRRC26
KDM6B
TCEA3
COX5A
SLC45A3
DAB2IP
PMEPA1
ANKRD39
NR2C1
ANKRD23
NFE2
NUP188
DOLK
ADAMTSL5
FOXO6
TRPV4
CHI3L1
MYBPH
RNF103-CHMP3
RMND5A
LARP1
AP5B1
OVOL1
FOXJ3
FOXE3
NID1
ETV4
ARL8A
DUS1L
SLC4A2
CDK5
ASIC3
CRYBA1
PRR5
PRR5-ARHGAP8
SLC16A8
MGAT3
ATP5MC3
ZNF436
DEPP1
NES
SLC11A2
CRISPLD2
NAP1L4
GALP
SNX12
MRM1
DHRS11
CADM3
CYBA
DUSP23
NGFR
ATP5F1E
TUBB1
CAPN13
OSTM1
DHX32
URM1
CRIP2
UPF3A
FAM72C
PCNA
FAM72D
CDS2
PTGES3
PDGFA
MTRNR2L1
STX10
IER2
INHBB
NAT8L
AKIRIN1
HEYL
HOXA1
IL17RD
NEFH
HRK
PALM2AKAP2
GBA
GPER1
STAB1
TDRD10
SHE
THEM5
ELMO3
FAM20C
NUF2
KRTAP12-1
SEMA5B
SH3BP4
PTP4A2
AP1B1
EEA1
ZEB2
CNOT2
MNT
GABRB2
GPR162
P3H3
ANOS1
KAT6B
BOLA3
ZIC3
LIN28A
CDCA7L
ARID5A
SYT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMYD2
TCF7
SULT1A1
HTR6
MTRNR2L2
MSH3
DHFR
HIRIP3
RIPOR3
WDR74
STX5
PLAGL1
DTX4
ATF3
TECPR1
RIPOR1
KAT6A
ZFP36L2
HAL
FAM131B
USO1
ZSCAN10
SDSL
CORO6
SDS
NFE2L3
KIF5C
L1TD1
RSPO1
STX18
UHRF1BP1L
DENND5B
GOLGA6D
TRABD
C1orf198
SLCO4A1
NPAS2
IFNLR1
SERTAD2
ADGRA1
FGFR4
PPCDC
LHPP
TRIM48
TMEM250
YIF1B
KCNK6
ARID3B
SEMA7A
GET3
BEST2
SSBP4
SLC34A3
SHANK1
CLEC11A
ZFHX2
DOT1L
C15orf39
NIPSNAP2
NANOS3
CLDN9
CLDN6
CXCL12
BHLHE40
ZNF664-RFLNA
ZNF664
CCDC92
NAALAD2
MTRNR2L8
SCAP
GLIS2
PTPN6
ABHD14B
ABHD14A-ACY1
ABHD14A
RIN2
ACY1
PHB2
BCL9L
GPRC5A
TNP1
TNFRSF6B
RUNX3
MSI1
SOX4
FAM83F
MYL9
USP30
ITPK1
FNDC5
FOXP1
GPCPD1
UXS1
LY6E
KRT82
CTSZ
DLC1
SAMD11
DNMT3L
NCBP2AS2
NCBP2
ZNF202
LZTS1
DSTYK
ZNF385A
ARAP3
ZFHX4
ZBTB17
HDAC4
GDPD5
UFSP1
ACHE
ECE1
LMF1
SOX8
POU4F1
TOP2B
EGFL7
RGPD1
RGPD2
WNT2B
TTYH3
ZBTB46
AFAP1
LOC389199
PHLDA3
CFAP74
DNAJB5
CRELD1
FXYD3
MPPED1
KANSL3
FER1L5
CDKN1A
TBC1D9
HHIPL1
CCDC85C
MSLN
FASN
LRMDA
RPH3A
PPM1J
DHRS3
C10orf105
OAF
BCAP31
ABCD1
DNTT
ARPC1B
SULT2B1
LPCAT3
STUB1
RHBDL1
RHOT2
AIFM3
LRP4
PPP1R13B
RBBP5
TNFRSF19
ZNF827
MBD6
DDIT3
SLC30A4
LIMK1
LITAF
EDN2
CTNNB1
SIPA1
SLC50A1
EFNA1
SBNO2
FBXL14
MCPH1
SEPHS2
INTS10
IKZF4
PLPP2
ANHX
VOPP1
PFKL
EMP2
FLNC
FGR
SH3BP1
CACHD1
ARHGEF16
SV2A
LPIN1
FGF19
C5orf63
R3HCC1
SF3A3
GAD1
GSG1
RFX4
RASGRP2
ODF3L2
PYGM
ATP2A1
DBH
SLC39A7
RXRB
HSD17B8
COL11A2
CDK18
MAPK12
MAPK11
SPSB3
NUBP2
MRPS34
EME2
RAB3IL1
S100A16
S100A14
DYRK1B
STN1
CCDC88B
EPM2A
ANK3
CACNA1H
TRH
TMEM132B
MAP6
ARRB2
NR5A2
TATDN3
NSL1
TNNC1
NISCH
SEMA3G
RGSL1
PPP2R3A
RCOR2
SPIB
MAB21L4
KMT5A
PITPNM2
GFI1B
TSC1
FXYD4
DUSP9
PLIN2
ZDHHC1
TNRC18
ANP32A
LOC100129484
PHLDB1
METTL24
ORMDL3
GSDMB
DCP1A
ZAP70
HMX3
FZD7
EFCAB14
TSPAN14
TTLL6
PANK4
HES5
ZNF593
C1orf232
GALNT9
ZNF639
BAHCC1
ROBO3
SIAH1
MAPK15
DOK7
ZC3HC1
NOTCH2
MACROH2A1
TBC1D14
ZNF792
MPP2
FCGR1A
COLGALT1
POU5F1
CPB1
ZACN
SRP68
GALR2
PPP1R16B
SLPI
NFAM1
COMMD7
MBD2
TTYH1
SNRK
ST18
DLL4
DCAF10
ADAMTS9
HSBP1
STRN
CPNE6
SQSTM1
PPP1R1A
DRG2
TCF20
MYH11
C22orf39
RAD54L2
OLFML2A
NR6A1
TSPAN31
AGAP2
ZMIZ2
ABCB5
SORBS1
SKIDA1
MLLT10
SPIRE2
ZNF615
NEK2
ADAMTS2
RASL10A
GAS2L1
RBM15
NFILZ
ADAMTSL4
PPM1H
M6PR
KLRG1
ZNF79
CLEC4C
KLF6
RBP1
COQ10A
ANKRD52
SUN2
DUSP10
RPRM
RAB5IF
ADAR
ARHGEF4
SLC26A11
NRG1
ZNF44
COL1A1
C7orf33
NATD1
PMAIP1
WDHD1
SOCS4
SLC2A14
MAST3
IL12RB1
ANKDD1A
FOXA3
STK11
CLEC18B
ADA
LOC101929372
CRX
LMNA
TMEM123
BIN1
SPIN1
MEX3A
PPP1R14B
PLCB3
ZNF496
TRNP1
NYX
SZT2
MED8
GPR108
TRIP10
TLE2
LDLRAP1
TCOF1
ABHD12
MLF2
MTSS2
EBF2
BACE2
LMX1B
CACNA1D
CPA1
FXR1
WDR86
CSF3
TRABD2A
GLIPR2
ISYNA1
UTS2B
CCDC50
FGF4
ASB2
TSPAN16
MFSD8
ABHD18
CHRNA1
PCCA
GLI3
CYB5R2
TYR
SERPINE1
VANGL2
MTARC1
UNC5D
THRA
VAMP8
TAC4
RFLNA
TAFA3
DLX1
IL24
DENND4B
TNFSF15
C16orf95
MRPL39
ISCA1
GYPC
LDB1
VEZF1
IQCC
DCDC2B
TMEM234
EIF3I
TLE3
SDC4
TBC1D22A
CFAP298-TCP10L
CFAP298
FAM210B
DNAJB1
BBC3
MYBL1
NANOG
RARB
SLC4A8
GALNT6
AP3B2
FRMD1
MIDN
UBALD2
SPAG8
HINT2
TRPM1
ATP5F1D
FAM120B
IDH1
ZBTB8OS
RBBP4
INPP5K
RRP1
DYRK3
DLL1
NMRK2
C1R
LAMB3
TSPYL2
MCAM
PRKAG2
GADD45G
PSMF1
NOP14
GRK4
LHX2
CAMP
TMEM247
SDF4
B3GALT6
RBM20
AURKAIP1
C1QTNF12
DDX3X
TARS2
LRRC71
PTK7
PKM
DUSP12
TESMIN
CTSC
TBC1D19
ANTXRL
NINJ2
PCLAF
TRIP4
GNAI2
PRDM14
PIANP
CRTC1
CIRBP
NFAT5
DAPK2
DSC2
FILIP1L
NKX1-1
CMSS1
DGKZ
SLC25A6
SEPTIN6
XPR1
C1QTNF4
LCN8
LCN15
LETM1
NSD2
EOMES
CHD4
FUT10
TBC1D8B
SMIM5
FRG2C
SREBF1
GSN
KIF26A
MAN2C1
MED23
NFIC
MAP2K7
PHETA2
NAGA
DMPK
KIAA1522
TRAK1
CNTFR
KDM2B
TRIAP1
COX6A1
ZSWIM8
CHCHD1
TRAPPC10
FUT11
PLCH2
KIF13B
KIAA0930
TRMT2A
RANBP1
SHH
MUC1
FABP3
TCF7L1
CTDSP2
LAMA5
TAGLN3
PLD2
TUBB2B
OTOP1
HOXA3
HOXA4
CDC34
TEX264
MELTF
ZNF710
REST
GXYLT2
MLLT6
MED9
SCN1B
HPN
FAM107A