ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPG7
IER3
FLOT1
PLCB2
NADK
NFE2
INAVA
PRAM1
LAPTM5
NCOA2
HMGCS1
PPCDC
ZNF414
SKIL
ARHGAP4
UNC13D
ANKMY1
RNPEPL1
GRAP
CD38
MTRNR2L2
MSH3
DHFR
GRAPL
LCOR
C5AR2
RNF166
STX1A
GFOD1
NIBAN3
CXXC5
SERPINB1
CBX4
MEF2D
CCL2
HSH2D
MYRF
DHRS3
GRK6
SPATA1
GNG5
FARSA
CALR
MTRNR2L8
MIDN
SREBF2
PCNA
CDS2
ARHGAP45
DLG1
RASGRP2
SQSTM1
DZIP3
CIP2A
MBD6
DDIT3
PDE4B
CSF3R
MAP2K3
FGR
INSIG1
ARID3B
COX20
MYO1G
MYO1F
CSK
IDH1
UPF3A
ARIH2
SIRPA
P2RY2
RPS6KA1
DBP
DOT1L
KIF21B
TPPP3
CENPH
FMNL1
KRI1
CDKN2D
ZC3H12A
CCDC88B
ZCCHC24
ASB2
NFKBIA
NRL
DCAF11
FDFT1
FDPS
MKLN1
TRERF1
S100P
OLIG1
NFIC
KAT6B
SSH3
MRAS
NLRP3
TOX2
LYL1
ARHGEF2
ICAM1
BAZ1B
SULT2B1
PITPNM2
PRKCD
DENND4B
RASSF2
MYEOV
SLC25A19
GPAA1
EXOSC4
LIMK1
BBC3
C16orf54
RBM15
BCL3
SYTL1
C11orf91
RAB11FIP3
KAZALD1
DRAP1
C11orf68
ARHGEF18
CD300A
PSMD3
DNAJB1
CCDC114
EMP3
PKN1
POC1B-GALNT4
GALNT4
MSMO1
KRAS
TMC6
TMC8
KEAP1
LRPAP1
ZNF740
CSAD
SNX15
CD248
SHISAL2A
FADS3
SEC14L1
ATG16L2
S1PR2
CTBP2
RARG
INAFM2
LYST
CCDC57
TMEM104
NAT9
RUNX1
GHDC
CEBPE
CYBA
PRTN3
BHLHE40
RAB11FIP1
EMILIN2
MRPS31
RAB3D
NUP210L
ARID2
SREBF1
PPP2R2D
BIN2
SMARCD2
ADGRG5
EPM2A
RNASEH2B
TBL1XR1
HUS1
SPDYE13
NDUFA4
PIK3AP1
PACC1
VSIR
SMIM20
AGTRAP
LRMDA
TRIB1
HES1
GALNT9
PDE6B
SPATA25
ZSWIM1
CDCA7L
HMGCR
PDE12
RAC2
CLEC3B
EVL
MTRNR2L1
LGALS1
NPEPL1
H4C11
DUSP10
TCTEX1D4
BTBD19
GRK2
PTPRCAP
SLC35D1
PKM
NOL4L
E2F3
SLC47A1
SLC22A18
LTB
LST1
YARS1
S100PBP
GSE1
FERMT3
ACTL9
NR2C1
P2RX5
SETD1B
LHX3
IMPDH1
UBE2E1
MTRF1L
CFD
AP2S1
TM4SF19
FCGRT
ALOX5AP
H6PD
AP5B1
CITED4
KRT8
GYPC
CYP51A1
ARRB1
PLAU
SH2B1
MAMSTR
SPRED2
ANKRD13D
RAP1GAP2
AHNAK
CCDC174
ZNF595
ASB1
EVA1B
TNFRSF4
TNFRSF18
IGSF10
MGAT4B
TRIM8
MID1IP1
SCUBE1
MAP1S
ZNRD2
FAM89B
EHBP1L1
PLIN2
MYBPH
LMTK3
OAZ1
HSP90AB1
SQLE
HIVEP1
NINJ2
JUP
TANK
RAB37
TRIB3
ANP32E
GMEB2
ADGRG3
DUS1L
IGFBP6
SOAT2
GPCPD1
SLC9A3R1
NCF1
ZNF746
RBBP5
USP3
UPP1
GBE1
NUDT4B
SMCHD1
TYROBP
MXI1
PARP15
UROD
HECTD3
MLXIPL
RHOF
WDR43
ARL4A
CD1D
IFNGR1
PKN2
IGF2BP3
STRA6
ATF3
ZASP
SAP25
PIKFYVE
NUFIP2
ANKRD10
PPP1R27
MCRIP1
GPR132
PDP2
ADPRHL1
TPRA1
H4C15
H4C14
MAP3K8
PEAK3
RNF103-CHMP3
RMND5A
PWWP2B
TAGLN2
RCAN1
TBC1D10C
PPP1CA
MSRB1
AGRP
SMG6
UMODL1
CTTN
SLC51A
SLC12A6
SLC1A5
C12orf75
ETFBKMT
SLC16A3
GRIFIN
DENND2D
SIPA1
NFIL3
PIK3CD
TLR9
CPSF4L
CTDSP1
PLEK
RHBDF1
MPG
GTF3A
CA11
TBXA2R
SH3BP2
GPR160
GPR146
ICAM3
PPP2R5B
SELPLG
MINDY2
KLF16
RARB
ADAP1
PLEKHO2
PDE8A
CDK13
SH2B2
ADRM1
SEPTIN9
C3orf86
ZC3H4
PPIAL4F
PPIAL4E
PPIAL4D
TRAPPC5
MCEMP1
TCF3
DSCAML1
NKIRAS1
NR1D2
SNX33
SH2B3
S1PR4
H4C9
GMIP
MTRNR2L9
OPA1
GLIPR1L1
CAPS2
PDCD4
BAZ2A
BCAP31
ABCD1
ATXN7L2
LRPPRC
LDLR
RCOR2
DENND6A
GFI1
UBALD2
S100A2
TMEM101
ZNF217
CLIC1
PCYT1A
DDAH2
SCD
IQGAP2
ARID3A
AXDND1
FBXO41
ACACA
FOXK1
CTCF
EFHD2
LOC388282
ATP2A3
KCNAB2
CD82
TSPAN32
C11orf21
PCNX3
MAP3K11
PPARG
TXNRD1
WNT10B
TRPM2
TREM1
BABAM2
RBKS
GPATCH8
KBTBD2
MVK
UBC
SLC17A9
POM121C
P2RX1
DIO1
MYADM
KLHL24
KCNIP1
CDK9
LY6K
CCDC154
PPP1R18
RGPD1
RGPD2
FOS
STEAP3
PHF19
CLTC
NCOA4
HRH1
ZDHHC17
CBFA2T3
RAPGEF1
NAMPT
PDLIM7
AVPR2
SCGB1C2
MTHFR
CLCN6
NDRG2
ARHGEF40
CCDC9
SYNGR4
LZTS2
PRNP
ATP13A2
IRF2BP1
LONRF3
FGGY
CHPT1
MICAL1
EIF4A3
PLEKHA8
TRIM11
MPO
VPS72
C1QTNF4
BPI
VOPP1
OGFOD2
VPS9D1
ICAM5
ICAM4
DUSP7
ITGB2
TAC4
MTF2
PMPCB
PTPN6
TBC1D14
EPN1
UBE2J1
PTCD1
CPSF4
ATR
ZGPAT
ARFRP1
TAF1A
ANK1
HBP1
LINGO1
B3GNTL1
H4C13
H3C11
QPRT
COPS7A
MFAP4
TEX2
C19orf53
QRICH1
OAF
HSPH1
GALNT7
FRA10AC1
LPCAT3
PLEKHG2
ZFP36
STK35
RHOH
ZNF584
NOG
ADM
BORCS7
HIP1
KMT2D
CAMP
STK3
PPRC1
FSCN1
OSR2
TFAP2A
VIPR2
AMY2A
LIMD2
ZSWIM9
LIG1
PIP4P2
CPQ
NUDT15
SLC9A5
FHOD1
H4C4
PLEKHA2
GOLIM4
CPXM1
RDH12
RDH11
MRPS15
TNFRSF1B
ITPRIP
MYO18A
DOCK2
RASIP1
IZUMO1
LZTFL1
PTEN
KLLN
CPNE5
NFAM1
SPN
SRF
MAPK12
NTSR1
LRRK2
KANSL3
FER1L5
BANP
ITPRIPL2
ZNF846
DGKZ
TCAP
PNMT
NEURL2
CTSA
RNF149
FKBP5
EP400
TNFRSF10A
GTF2IRD1
ZNF76
CCDC59
TTYH3
RIOK3
FRAT1
EPS15
LMNA
SKIDA1
SNUPN
CACNA2D4
MIDEAS
TCIRG1
GPX4
MAFG
FBXO6
FCRLB
SP1
HSP90AA1
SULT6B1
NR4A3
PFKFB4
LSG1
TNFSF14
CUL2
UCN2
HOXA3
ZDHHC4
C3
NAA38
DYRK1A
BRI3BP
TMEM88
CYB5D1
IFRD2
DRC7
KCNE1
FTL
DMAP1
KLF10
MIEF1
C5AR1
PLXNB2
NDUFS7
DUSP6
ING1
SPRING1
RNFT2
MAP1LC3B2
TMIGD3
SC5D
TXNDC5
NIT2
ADORA3
LTA4H
NFIA
UCP2
CDCA4
VDR
HAPLN4
NUBP1
UBR4
GDPGP1
CIB1
APBB1IP
UHRF2
PIM3
FBRSL1
FAM214B
C15orf62
XCR1
INTS1
ATXN2
DHX33
PEX5
ATP11A
AFF1
SBF1
YWHAQ
INPPL1
EVPLL
ITGAL
UNC45A
HDDC3
CNOT2
H4C12
CLIC4
CHD9
NYX
SH3BGRL3
CDC42EP4
ZNF317
RBPJ
MFN2
TM7SF3
HSD17B7
RWDD1
KMT5A
POLG
TMBIM6
TBL2
AHCYL2
ZYX
FAM131B
SREK1IP1
CWC27
TP53I11
MLEC
DNAJB2
TPD52L2
ABHD16B
CCL5
BCAT1
PPIAL4C
PRSS57
CCNL1
PSMF1
STING1
NOTCH1
SIGLEC7
DAGLB
BCKDK
SASH3
PGLS
RAB43
TNFAIP2
SLC39A11
SMAD3
ENO1
ARHGAP27
TBP
PSMB1
COMMD4
SETDB1
SCAP
FZD5
CLDND2
MAPK8
NKG7
DNAJB12
ADAM8
TRIM14
CCL3L3
CCL3L1
CCL3
PARP2
CYTH3
SLC25A15
FGD3
B2M
KDM3B
MRPL24
FCN1
PHETA1
HMGN4
MRPS23
VGLL4
ZNF750
MTRNR2L10
FOXP1
HPCAL1
EIF3G
SCAMP4
ADAT3
ANKRD33B
OGA
DYNC1I2
VAV1
KLF1
NSA2
GFM2
GCDH
PPIAL4H
OTUD7B
MDM2
RAD54L2
ERLIN2
MAD1L1
RFFL
ALDH3B1
THEM4
PTPN7
SUCNR1
PHLDB1
PPP1R1B
CYB5R4
WDR18
SLC35E2B
ZFAND3
DLGAP4
LFNG
KMT2E
CRACR2B
PGPEP1
PSMD1
STX18
PHC2
PEX14
DFFA
RNF139
NYAP1
TSC22D4
LBR
OSM
PRDM10
ARPC1B
PTP4A2
ATP11B
ZNF350
APOM
BAG6
SLC25A18
TRIP4
MFSD8
ABHD18
THAP11
NUTF2
CENPT
CD63
PLD6
GGPS1
ARID4B
DUSP11
C2orf78
ARL8A
CDC42EP3
PA2G4
EHD1
EIF1AD
BANF1
SYT7
GIT2
IPO4
ANKRD13A
PPP1R15A
SH3RF3
MTMR4
RPL22
ANPEP
SH2D3A
PNO1
LSM5
AVL9
ST3GAL2
VAT1
RND2
NTN3
TRIM38
LNPEP
ARL6IP4
RAB20
RGS12
UGP2
CCDC130
RBM7
C11orf71
SUSD1
GLUL
CXCR3
LCP2
LRCH4
FBXO24
NMNAT1
LZIC
EMC8
COX4I1
POU2F2
RASSF4
DGKD
PDPR
SIDT2
RASA3
C7orf26
STRIP1
ERCC1
FBXO46
CFLAR
CLDN12
PHF12
THRA
ZNF503
TES
GBA
ZNF775
RCOR3
ABT1
TMEM167B
U2SURP
RIPK1
OR1D4
ZNF140
RHEX
KLF2
TOM1
ARL5C
NEU4
SLC25A39
RRP12
ANAPC5
WT1
RNF130
PRELID3B
NDRG1
DPP8
PGD
BSDC1
ATP5MF-PTCD1
ATP5MF
SATB2
GHRL
CAST
AZIN1
DDX23
DOK7
CSF1R
GLIS3
LGALS9B
GPNMB
FURIN
ZFP91
LPXN
SEMA4C
ZNF609
DENND5B
TMEM72
VWA1
SEPTIN2
HDLBP
RBP4
COL9A2
EEA1
USP36
TRIOBP
PRXL2B
ETV6
SIRPB2
PROSER1
NHLRC3
RASSF5
INHBE
REPIN1
NEK2
HIKESHI
RAP2A
ZNF862
SYK
DYSF
CCDC146
ZNF652
FUT7
KDELR1
GRIN2D
EPHA1
ZNF577
CCDC144A
RPLP0
MKNK2
USP8
SLC25A16
TMTC3
CEP290
ARHGEF25
GAS7
CSRNP1
PPFIBP2
SCAF1
RRAS
SF3A3
HEXA
POM121
PEMT
GTF2B
HMX3
LPAR2
FAAP24
CEP89
NUF2
ABCC11
DNAJC16
CASP9
LONP2
MFSD10
WASHC2A
SKA1
MEF2B
QPCT
GPR35
IL1R1
SLC41A3
GGH
NTNG2
SLC22A15
ARSG
LAMP1
ARMC12
EBAG9
SLC16A6
TFAM
MRPS17
DOK3
PLAUR
CCR5
SIRT1
CYP1A1
SLC3A2
HELZ
AMN1
NDUFAF3
DALRD3
PPP3CB
UNCX
KBTBD6
ONECUT3
OCIAD1
ABHD2
COQ10A
RNF168
DRG2
PRCC
SOD2
WTAP
MRPL4
ST3GAL1
CES1