ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
ING1
MRPS28
PXYLP1
NDUFS7
CBX5
HNRNPA1
CNOT2
OTUD7B
BABAM2
RBKS
POLD2
RARG
ZBTB7C
SMARCD2
KANSL3
FER1L5
NFE2
ITFG2
ZCCHC24
ATXN1L
ZNF827
GPRC5A
REEP6
PCSK4
TAF1A
DONSON
FTL
PKN2
CLK1
METTL3
HORMAD1
WDR7
IER3
FLOT1
TUBB
RAE1
ZFP36L1
MTRNR2L2
MSH3
DHFR
CAPN1
GATD3B
GATD3A
DYNLT1
SYTL3
KDM3A
ZGPAT
ARFRP1
NANP
CCDC174
LOC114841035
FKBP2
STX18
MBD2
RASA4
KDM6B
ASNSD1
ASDURF
TRIP10
GPR108
MAMLD1
EIF5
MAML3
CTF1
BCL7C
NR2C1
MTRNR2L8
PDE6B
RASA4B
NUDT15
UQCR11
ZNF395
BACE2
USP42
RARA
SKIDA1
IMPA1
C19orf12
HECTD4
CTBP2
UROS
BCCIP
MTRNR2L1
KLK10
TRMT1L
SWT1
LIPA
TRIP12
FBXO36
USP1
PTGES3
TMEM241
RNASE4
ANG
CLCN3
ARHGEF35
FAAP24
CEP89
STAT2
APOF
DUS1L
SNRPA
C19orf54
EFEMP2
ATP6V0B
DPH2
B4GALT2
KRT15
NCOA7
CFAP69
PMPCB
AZGP1
DNAJC16
CASP9
PPP2R5A
PLEKHA8
ANKS1B
ARHGEF5
MIGA1
TRABD
CYB5R4
MRPS31
TEX264
CBR4
INTS5
SLC29A2
NCLN
SEPTIN2
HDLBP
NAGLU
UQCRC2
FOXP1
PPP1R13B
USP37
CNOT9
SZT2
MED8
PDCL
RPL37
COL23A1
ALDOA
KMT5A
FXYD3
SREBF1
MED9
RNF207
SMIM20
FAM78B
GMNN
BAZ1B
DRG1
SLC25A16
GCN1
HGH1
CDC42SE2
PSMB4
SERTAD2
FKBPL
ATF6B
COLEC11
NPNT
TSPAN10
NPLOC4
IGFBP6
SOAT2
RASAL1
SPATA25
NEURL2
CTSA
NFIC
RNF121
LOC100133315
SENP8
MYO9A
MRPL54
APBA3
ZSWIM8
CHCHD1
SH3YL1
ACP1
ADAM17
RNF220
PLA2G6
ST8SIA6
MINDY3
ABCC10
CCDC59
SLC11A2
CAPNS1
APOM
BAG6
TP53INP2
AARS2
TECPR1
MELTF
ABHD3
SH2B1
CCL28
C12orf73
RGPD1
RGPD2
GDPGP1
CIB1
RPL5
TDRD3
TNPO3
SPIN1
HBP1
AFF1
COL27A1
KLHDC2
ROGDI
PARP9
DTX3L
FDXACB1
C11orf1
RPS3A
MRPS16
PCTP
TTK
DCPS
VARS1
SOD2
WTAP
FABP5
NAA40
TLR5
MYADM
GPAA1
EXOSC4
SCNM1
LYSMD1
RPS19
KRI1
CDKN2D
ENTPD5
BBOF1
TRIB1
TF
SERPINI1
PDCD10
HDAC9
PCCA
DBP
ATXN2
NOTCH1
EPM2A
SEMA4G
LOC105378979
PACSIN2
FGF13
KBTBD3
AASDHPPT
ZNF133
SLC39A9
ERH
SLC30A4
SAMD12
HCN3
CLK2
SIPA1
RIMS1
TAF6L
DNAJC27
ACYP1
ZC2HC1C
TMED5
CCDC18
MKRN3
CDC42EP1
DUSP4
CGGBP1
C3orf38
DHRS3
BRD2
SRPX2
ARIH2
SULF2
ZASP
SAP25
LCN2
MBD6
DDIT3
CEP70
CDH11
TRIM38
KLF5
AP2M1
MIEN1
TRIM17
PCGF2
ZNF77
SRCAP
LOC730183
TMED10
MINDY2
ARID4A
UBE2V2
MDM2
DZIP3
CIP2A
PRUNE1
MINDY1
BCO2
SLC25A6
DPP9
SLC30A3
DNAJC5G
TRIM54
PSPN
ALKBH7
RBM19
SEC24C
ECH1
IFT22
ZNF318
SP2
SKIV2L
NELFE
ABHD14B
ABHD14A-ACY1
ABHD14A
TXNDC11
PTEN
KLLN
CD46
SMPD2
PPIL6
LRRC1
ACSS3
ESRP1
RPS8
KCNQ4
ZNF746
ATP6V0E2
GPATCH8
INPP5K
KAT6B
AP1B1
ETFRF1
CFAP94
MACROH2A1
ZNF384
LEKR1
ODF3L2
SLC25A35
ZNF85
SEC23A
IGSF10
ANXA7
SPATS1
SNX12
NEPRO
STAM2
ERCC1
GBA
LSM8
FDX1
URGCP
URGCP-MRPS24
OTUD5
ADA
KLHL24
POMP
TBC1D22A
MRPS36
PIM3
OSGIN2
SCAP
AKTIP
HNRNPA1L2
ELOVL4
DLG2
MRPS33
DNAH14
ARHGEF25
DTX3
CNDP2
GRK6
HEXIM1
CCDC71
DDT
DDTL
PHGDH
CCDC102A
SPAG16
KCTD9
CDCA2
FRG2
TP53INP1
SNRNP35
LRRC61
ACTR3C
LARP1
IVNS1ABP
DKC1
MAMSTR
CSTA
CS
POLDIP3
TRIM26
SMAGP
SBNO1
ANAPC15
ACBD3
TAOK3
SUDS3
ADM
HIKESHI
ZMIZ2
OTUD6B
KBTBD2
TBC1D8B
WWTR1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
CDHR2
CAND1
PRR3
GNL1
IQANK1
FAM83H
KCNS3
B4GALT6
DYNLL1
CLIP1
SRSF9
RAB3GAP2
ZBTB20
RNGTT
LUC7L2
NR6A1
SYS1
ESR2
SEC61B
ALG2
ZXDC
ZNF492
CXCR4
NFKBIA
DCAF7
SLC25A53
OPTC
SRSF2
MFSD11
FAM3C
SLC22A4
HIC1
KRT14
KMT5C
ZNF446
MED12L
RPL34
EXD2
CCDC120
TJP3
C16orf70
EPN1
UFD1
CDC45
XRCC6
DESI1
CEP78
LOXL4
LEO1
BAG2
MCOLN1
PCDH1
AXDND1
CYP4F11
PSMA3
MGAT1
MROH1
ENOX2
RBM7
C11orf71
PAXBP1
QSER1
LMF1
SOX8
IRF9
PITX3
GBF1
SRSF3
SIRT4
COX5A
MYL12B
CLUAP1
NEK2
TRIM2
PRKD2
MAP4K5
ATL1
ZFP41
NUDT17
PEX2
STK11
SLC38A1
TMEM167B
ZNF563
MT2A
C12orf65
SLC3A2
IRX3
SCYL3
ISYNA1
MFSD8
ABHD18
PCBP2
FZD4
CALM2
CSTB
BBS9
SREBF2
P4HA1
ZNF22
AASDH
DDX1
FAM114A1
TMPRSS12
RNF10
UGT1A3
CSF3R
DNAJA2
PLBD2
ZBTB44
KCNN4
SMG5
TMEM79
C2orf73
FRMD3
SIKE1
OSBPL1A
ACADM
THAP7
ZNF69
EPHA7
DNAH12
HMGN3
GFM1
LAMTOR5
OR6B2
NDUFA10
MRPL34
ABHD8
MRM1
ENOSF1
CLK4
SINHCAF
EEF1A1
PNN
TRAPPC6B
PLEKHG3
ST3GAL4
MAPT
TENT2
TCF7L2
PELI2
RAB11FIP2
MPZL2
CASD1
FMC1-LUC7L2
FMC1
CLDN7
ZDHHC3
EXOSC7
DSG2
BCKDK
ADRM1
RPS14
AGPAT3
RNF135
MADCAM1
DUX4
CDC14A
ARHGEF33
KRIT1
ANKIB1
ZNF76
PRELID3B
HSPA6
PRPSAP1
CD320
AMER1
RNASE1
POLR2B
NOA1
TPD52L2
ABHD16B
UFSP1
ACHE
OSR1
DYM
ZNF891
ZNF10
PSMD14
SQSTM1
DNAJB1
S1PR2
CRNKL1
CFAP61
TECR
CLDN4
MYOZ3
LRRC59
NLRX1
RNF168
BLVRB
SPTBN4
DYRK2
SYCP2L
GCM2
CALML5
HNRNPLL
SNRPD1
CCDC9
TACC2
TMEM209
SSMEM1
WARS2
DTNB
RND3
MRPS18B
LTBR
POLRMT
EFS
HUS1
PNKD
TOE1
MUTYH
SLC4A2
CDK5
NADSYN1
DHCR7
HEXIM2
ZNF484
SLC30A7
EXTL2
COP1
KIF20A
BRD8
WDR81
OSER1
TAF2
SEMA3E
CCDC130
KCNK6
YIF1B
SH2D3A
PTBP1
NOD1
CYB5A
DDX5
SNX3
ZBTB45
ZBTB7B
PPM1D
ELP6
SHPRH
ARHGAP35
TAF12
SRSF5
DENND6A
RABL6
ZNF572
SYPL1
TMEM129
TACC3
SMG6
PPP1R9B
SUPT7L
SLC4A1AP
C2CD4D
STK32C
CCDC38
AMDHD1
RUFY1
MTFP1
KRT7
ADCK1
NUP85
HIBADH
NIBAN2
DCAF10
DSC2
CTNNA1
GOLT1A
TXNRD1
PAK4
HMG20B
BMI1
COMMD3-BMI1
COMMD3
OBP2B
KLHL7
ANKRD50
AQP5
GABARAPL1
GXYLT1
RBM15
HINT3
H1-0
SIK3
CDK13
NAGK
CYB5R2
PAN2
THUMPD3
GSPT1
TKFC
DDB1
HES4
ZNF503
CBY3
CUL5
PPIL2
FASTKD2
ZNF506
TMEM53
ARMH1
POLR3B
RPS12
SPAG8
HINT2
MDP1
CHMP4A
R3HCC1L
CRY2
KHNYN
CBLN3
REL
MON1B
PNISR
STRAP
MARVELD1
IDH3B
ALS2
ZNF675
RNF19A
SMAD1
CCDC88B
FOXJ3
WDR43
RNF5
AGPAT1
GIT1
ANKRD13B
DMAP1
HLA-E
GSE1
UQCRH
LRRC41
KHDRBS1
KIF22
ITGB3BP
EFCAB7
NR4A1
PLPP2
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
POLR2E
NUP205
MRPS7
GGA3
FRG2C
HADHB
HADHA
RPL21
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
ATP5MG
SLC35B1
STAM
TSN
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
ZRANB2
TTC8
GOLGA5
SUPV3L1
IQCG
DPH6
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
LRR1
NEUROG3
PTGES2
HES1
PIN4
SUCLG1
OAZ3
MRPL9
UBE2I
HES3
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
HOXA4
CDX2
SPATC1L
CYP26A1
VEZT
FGD6
ARID3B
FZD8
SEC11C
EIF2S3
GADD45GIP1
RPL7
RDH10
BICRA
SYBU
HOXA3
CDC73
PMAIP1
ID2
TMEM107
ARHGAP10
C16orf91
RPN1
GTF3C4
DDX31
ZP4
GORAB
NEUROG1
CCDC200
ATOH1
NEUROD1
CNPY2
BNIP3
TLE3
ZNF383
LEFTY2
IGFBP2
LBX1
TPM1
TLE4
DNAJB7
MRPL38
SPCS1
GLT8D1
H2AW
PHOX2B
TTI2
PDHX
APIP
WDR74
HOXA2
ST18
HOXA1
TBX3
LIN28A
ASB2
INSM1
DUSP6
PCGF1
LBX2
CCDC33
CDCA7L
METTL24
TEPSIN
NDUFAF8
ERRFI1
PCBD2
DNM2
FGF19
TPRA1
ANKLE2
HOXB3
ALKBH5
P4HB
RUNX1T1
TBX2
FBXO31
NPAS4
MLEC
HPD
PRUNE2
TNFRSF19
ANKRD28
DLL4
RPS10-NUDT3
RPS10
SP5
TMEM70
ELOC
PDE4D
PDHB
SYNPO
SMAD3
CCNDBP1
DAPL1
CLGN
LPIN1
ARHGEF28
CAMTA1
RAB5B
ID3
TMEM120B
KIF21B
DCTN3
DLX4
TLE1
XKR7