ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◣ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
PSMG2
CEP76
IPO13
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
RPL21
POLR2E
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
FRG2C
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
GOSR2
VARS1
BBS9
MRPS5
ZNF576
IRGQ
UPF2
RARB
TSN
PAK1IP1
C6orf52
PSMD12
RPS23
ATP6AP1L
DPH6
PDE6B
ATP5MG
DAPL1
GOLGA5
CAPRIN1
EIF4ENIF1
C19orf48
IQCG
RPL35A
SEC61B
ALG2
SMC2
TTC8
PES1
BABAM2
RBKS
IGFBP6
SOAT2
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
PI4KB
RBBP5
PNO1
ACTR10
TMED1
SUPV3L1
NDUFA4
USP1
ZRANB2
SART3
ISCU
PKDCC
RBPJ
LYPD1
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
DUX4
XPNPEP3
ST13
UFM1
SLC22A2
ZFHX3
FRG2
PROSER1
NHLRC3
RPS27A
CLHC1
SYBU
CLGN
CBX4
PCBP1
LTBR
SCNN1A
RPS12
PTK2B
C12orf29
ZGPAT
ARFRP1
ZNF608
LRRN4
CDC42EP3
CYP26A1
CREB5
NEO1
PTGES2
METTL24
SF3B3
COG4
PAF1
FOXP2
PXDNL
NSUN6
ARL5B
TLE2
PDE12
VANGL2
BARHL2
CITED2
APOM
BAG6
NR2F1
HMGCS2
HEXIM2
RBMS3
GATA4
GABRB2
MYRIP
CCNDBP1
HEY2
MRTO4
EMC1
SIRT4
GADD45GIP1
MBD2
OR6B2
NDUFA10
KCNIP4
EIF2S3
SCMH1
ACOT2
MTRNR2L1
RPS29
LRR1
SLC30A4
HBB
ST7
BANP
ZNF383
MSX2
DIAPH3
PDK1
ZNF746
POP5
SUCLG1
ARHGEF10L
LAMA3
HES1
CABIN1
CDC73
SEMA3E
ST18
ARHGEF38
TNK2
SKIL
NFKBIL1
DDX39B
ATP6V1G2
CCDC200
HMX2
DMBX1
BNIP3
TPM1
RPL7
RDH10
TMEM107
LAMB1
HOXC4
HOXC6
HOXA3
CACYBP
PDHX
APIP
KAT6B
MEOX1
TBX2
SEC11C
ZBTB25
ZBTB1
LIN28A
RARA
TXNRD1
ANK3
FREM2
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
ZNF407
PIN4
TBC1D9
GORAB
HOXA1
OAZ3
MRPL9
FOXP1
ZFHX4
FMN1
TTI2
CDS1
PCBD2
PCDH15
SLC25A6
MGP
RPP25
SMAGP
PRUNE2
SERTAD2
CNPY2
GTDC1
MKRN2OS
MKRN2
ARAP2
CCDC33
ITGB8
SPCS1
GLT8D1
USP44
ALKBH5
TMC7
GTF3C4
DDX31
ZNF367
NDUFB3
FAM126B
FRRS1
CNR1
MET
EPM2A
SHOX2
RSRC1
CXXC4
ATOH1
TRIP10
GPR108
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
SHMT2
TAF9
RAD17
AK6
RPN1
LYPD6B
ANTKMT
METRN
GFRA1
PDZRN3
NLGN1
TNFRSF19
AGO1
ZNF395
C6orf163
ETFBKMT
SCML4
ABCB4
CCDC59
OTUD7B
KDM3A
INKA2
IL20
SPAG17
RBM20
RARG
DONSON
ASXL3
MYZAP
GCOM1
HOXB1
TIGD1
EIF4E2
TMEM70
ELOC
SCAMP2
CLNK
SPIN1
ZNF341
BNIP2
GEMIN2
TMEM106B
KDM2B
PRTG
SALL3
COL23A1
ID1
KRTAP23-1
SLITRK6
DHRS3
MRPL34
ABHD8
B3GNT5
HOXA4
EIF3D
ACKR3
MEIS2
SNCG
MMRN2
ABLIM3
PKIG
POGLUT3
NDST3
DENR
ZASP
SAP25
SLC25A53
CFAP69
SCOC
STK36
RNF25
KMT2A
MAPRE1
TMPRSS11F
RPS24
POLR3A
PRDM10
LIX1
MCU
TFAP2B
REC8
RUNX1T1
UNC93A
SOX14
GGA1
ELOVL6
ATXN2
PEX14
DFFA
ARSF
LMO1
ACOT1
ITGAV
NEFH
RNF207
SEPTIN2
HDLBP
REL
IPMK
CISD1
BRWD1
OSGIN2
COX5A
IGF2BP3
KAT6A
NELFA
BCAT2
RABGAP1L
CTF1
BCL7C
SLAMF8
FGD3
SFRP2
C16orf91
SEMA6D
NXPH4
USP34
RGS8
APLN
KDM6B
ZNF827
SHB
LYPD6
STATH
ADM
KLRC3
UBE2I
GJA10
TSPAN3
CALM2
H2BC5
H1-4
IL17B
C1orf105
ABI2
ZNF385B
AP3D1
VPS33B
AFAP1
LOC389199
HUS1
ADAMTSL4
LYN
TSHZ1
EOMES
PDHB
MYADM
TCF7
PRKD1
IGFBP2
SMARCD2
SVOPL
SIGLEC15
RBBP8NL
CLDN9
DNMBP
SPATC1L
DCTN3
ARID3C
KCNK2
HAPLN1
CCDC174
ILF3
PHIP
ZNF507
CS
PDE4D
YTHDF2
IMMP1L
ELP4
MIGA1
SLC7A7
CRABP2
BICDL2
PXMP2
POLE
GFI1B
TSC1
STX19
KANSL3
FER1L5
SRSF11
LRRC40
ATXN1L
KRT18
ACY3
TRPM7
PCLO
TPRA1
TACC1
EBAG9
ATXN7
IFI16
OTUD4
ZBTB17
SSBP2
BEND7
SYNJ2BP-COX16
SYNJ2BP
CLCN3
ACYP1
ZC2HC1C
COQ5
HSPA4L
RYR2
LMO4
UFSP1
ACHE
DUSP9
DMAC1
TBX3
GADD45A
EIF4H
PDCL3
LOC100287896
LIPT2
TMTC3
CEP290
KCNC3
CCN1
USP17L20
USP17L22
NR2C2
MGST1
CBWD5
CBWD3
CBWD6
HNRNPD
KANK1
ZDHHC17
ACBD6
RILPL1
ACTR3B
CDKL2
QPRT
RPRM
FAM168B
POU2F1
DLAT
SATB2
TMSB4Y
TMPRSS12
SH2B1
HNRNPA2B1
CBX3
MTF2
UROS
BCCIP
FGD5
VEPH1
CYP51A1
PRKAG2
PDE4DIP
SLC40A1
TLE4
GTF2IRD2B
KCNH1
NEUROG1
SORBS2
TANC2
LSM8
YEATS2
CNN2
IMPA1
PRR13
KLHL32
MELTF
SELENOS
KCNS3
TMPPE
GLB1
CEP70
MEMO1
GPRC5A
GOLIM4
EML5
BCAS2
TCHP
JAK1
RASSF6
CCNC
FANCL
BAG2
KCNN2
MTMR10
RTL6
FZD8
POLR2J3
TAF1A
C2CD5
GGH
STX18
PCTP
PEX2
PRXL2A
NCBP3
NRDE2
PYDC5
ZNF3
MTMR2
CHD7
MPP5
PTGES3
SFT2D2
DIO2
CNOT10
CCDC102A
PXYLP1
UBE2V2
ZBED9
TCF4
SNX3
BIRC6
EID2
GPR37
ID3
SPECC1
SPRR2F
EPHA6
NEUROG2
RIMS1
ATXN7L2
PIP4K2B
SLC5A10
PALLD
CMSS1
SULF1
FILIP1L
LOC102723360
EYA1
BAMBI
PARP4
SLC36A4
USP12
PLIN2
HMGA1
COLEC12
FAM110A
PLEKHD1
NEK3
C6orf136
RAB11FIP2
CMTR1
ZNF384
TPCN1
TBC1D5
PLS1
RTN4IP1
QRSL1
SULT1A1
CAPZA2
BCAP29
RYBP
EFCAB2
TTK
ARHGEF5
OTOL1
USP17L21
USP17L12
USP17L11
USP17L18
PHACTR2
SPP1
IFT22
SCAP
PELI2
VWA8
SBF2
LRRTM4
RAI14
ZSCAN12
PPP1R13B
INPP5A
CRPPA
TXNDC11
CATSPERG
KMT5C
EXPH5
NTAN1
ARL14EP
DRAM1
NUTM2E
FAM162A
CCDC58
EIF5
MRPS36
SRSF10
PIGU
ERCC6L2
WDR11
OR5A2
CEP41
FDFT1
SEMA4B
RHOBTB1
NR2F6
FSTL3
PIK3R1
C15orf61
ADAMTS7
SLC48A1
NR2C1
MARCHF6
CRKL
MGST2
ANKRD36C
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
MTRNR2L2
MSH3
DHFR
MTRNR2L8
HES3
CDX2
VEZT
FGD6
ARID3B
BICRA
NFE2
PMAIP1
IER3
FLOT1
SP2
ARHGAP10
ZP4
NEUROD1
DPP9
SPATA25
ERCC1
TLE3
LEFTY2
LBX1
NEURL2
CTSA
DNAJB7
MRPL38
H2AW
PHOX2B
WDR74
ASB2
INSM1
DUSP6
PCGF1
LBX2
CDCA7L
TEPSIN
NDUFAF8
ERRFI1
DNM2
FGF19
ANKLE2
HOXB3
P4HB
FBXO31
NPAS4
MLEC
MINDY2
HPD
ANKRD28
DLL4
SP5
SYNPO
AXDND1
SMAD3
LPIN1
ARHGEF28
CAMTA1
RAB5B
TMEM120B
KIF21B
DLX4
TLE1
XKR7
RXRB
PHC2
DOLPP1
ARRDC4
ANK2
PGK1
SLC39A7
HSPA1B
CBFA2T2
ATF6
MSX1
MFSD10
UPF3A
PRRX1
KATNB1
PANK2
SMPDL3A
SQSTM1
LZTS1
TMEM101
TRIB1
BAIAP2
FRA10AC1
PPP6R3
ABHD2
ABCC10
NINJ2
ZNF687
BCL3
RFX1
MYLK4
MTMR4
GPCPD1
NRL
PCGF2
NBPF1
KCNAB2
TOP2A
CCNL2
PSPN
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
NUBP1
SACM1L
ADAP1
DYNLT1
FURIN
NFKBIA
ARSG
MIDEAS
IQSEC3
POLDIP3
RNF103-CHMP3
RMND5A
DCAF11
CNTN1
RASSF5
SP1
PCNA
ZFAND2A
OSBP
NLK
PPCDC
STIP1
EIF2AK3
KAZALD1
DLG2
CSF3R
RHBDD1
HMGCS1
SOD2
AHDC1
LRATD2
MDM2
ATP5F1B
GADD45G
SLC45A4
PSMD6
RAB11B
KNL1
RBBP7
G3BP1
LPCAT3
KMT5A
NCOA2
EVI5L
KDM8
DSCAML1
RTN4
TRAF7
MACROH2A1
FTL
JUP
DDA1
MALRD1
GPC6
SREBF1
POLG
FAM107B
SMIM20
SLC7A5
DLC1
CRLS1
GRSF1
SOCS3
B4GAT1
TRIM46
LIG3
EVA1A
SHF
MBD6
DDIT3
MIDN
METTL11B
RGS12
RBFOX2
PLEKHG2
SPG7
ARHGAP24
SEPTIN9
CCL26
GLRX5
PKN2
SSBP4
FST
DAGLB
SLC6A12
LCK
FAM167B
CBX5
TMEM94
BAHCC1
SEC22B
CCDC43
RGS3
ARAP1
INAVA
ZFP36
BFSP1
NCDN
KIAA0319L
PRMT5
ATP6V1E2
TLN1
CREB3
STAP2
MYEOV
HPCAL1
SH3YL1
ACP1
H3C12
H2BC17
H2AC17
ABCA4
DIABLO
FGR
ZBTB18
MRPS28
PLEC
RAB37
STX1A
SERPINB1
SERPINE1
LRCH4
FBXO24
RHOQ
CACNA1D
GMEB2
TCF7L2
ARID2
HMGB1
ANKMY1
CIC
FRMD3
ARHGAP4
HNMT
ARID5A
CAPNS2
UGP2
CNKSR3
NKD1
CPT1A
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ROGDI
DNAJB3
KIAA0319
BRMS1
MRPS24
TRDMT1
SYNJ2
LAPTM5
HOXC5
TES
PHETA1
RNF166
KCTD7
EFEMP2
LNPEP
RAC1
CDS2
INSM2
CSRNP1
USP42
INAFM2
ARID4A
ANKRD1
ILF2
LFNG
PNKD
LIMA1
ARL8A
ZNF414
PLAGL1
TDRKH
TUBB4B
HTR5A
AIFM2
EVPL
SEC14L1
SYTL3
HIBADH
CERK
IKBKB
WTAP
LMNA
ZNF76