ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814860 | BE(2)-C
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◣ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
TBX2
EIF3D
ABCB1
DLG2
RFPL1
PDE3A
ST6GAL1
PCM1
HTR3B
FAM162B
PPP1R12A
EGLN3
SYBU
HIGD1C
KCNK16
SMAD1
TBX3
MFSD6
PSME3IP1
SEMA5B
SLC37A3
TEX101
PDZRN3
PMFBP1
DIABLO
PTPDC1
STARD4
TTC30B
ENOX1
FRA10AC1
PIK3C2G
CBFA2T2
NRSN1
KIAA0319
TMOD1
APLP2
ASB6
LINGO2
DAOA
SLC10A4
VIP
ABCC11
AOPEP
IKBKB
ARHGEF28
ENPP3
MTRNR2L2
MSH3
DHFR
ABCA12
KPNA4
MYT1L
ANKRD28
DYNLT1
KLHL1
CERK
CNKSR3
CAPNS2
HTR4
GRK5
IGFBP5
LSMEM1
FAM228B
PFN4
AFF3
ZNF148
LNX1
NRCAM
PSMD6
FAM160A1
GPR19
CASD1
ZZZ3
CAMSAP2
ERAP1
STX18
TNFRSF19
SCHIP1
CADM2
DRGX
FGF20
RUNX1T1
SYNPO
HS3ST5
DEFB130B
DEFB130A
CXCR4
AOAH
DGKB
ETS2
RBFOX3
EPYC
ZNF335
FBXO34
CNP
PTPRR
RGS7BP
ZBTB18
CLCN3
HECW2
RAPGEF2
POF1B
FRMD3
ATP6V1G3
SH3BP4
MMP7
COMTD1
CRYGB
SRPK2
RAMP1
ABRA
MYRFL
SHLD1
KIF1A
HNMT
DNAJB8
CDH18
CPXM2
HDAC9
TTI2
HOXC4
HOXC6
GPR88
MTRNR2L8
DCLK3
AGTR1
NEFL
DLC1
B3GNT4
SCML4
FILIP1
PELO
ITGA1
SGK1
PRSS12
TJP2
POLR2E
QPRT
CRISPLD1
OR5AR1
COL21A1
FBXO7
UBL4B
TRIM7
ATP5MG
DPYS
PDE4D
PC
RARB
C6
SORBS2
SLC35A3
PCDHAC2
ZNF804A
MYH15
WDR19
RMDN3
CLDN12
C1QL3
KCTD7
PXYLP1
RBM20
MRTFA
DUSP6
SPATA7
IMPG2
VAV3
RP1L1
GRWD1
BMPR1B
BIN1
HAPLN2
NOMO3
CHRNA3
NOMO2
GNL2
GABRR1
CARS1
JRKL
CCDC82
RABL2B
RPS29
HMGCS1
THSD7A
SART3
ISCU
GPR22
C14orf93
FGL1
GJA5
TRIL
LIMA1
ZFHX3
LMNTD1
NOMO1
RWDD1
UFM1
OTOR
ADAMTS18
ADAMTS19
RBM15
PAM
CYP26A1
KBTBD11
SLC22A23
ARHGAP24
SEC22B
RABEPK
EXOSC5
BCKDHA
CYB561
GPR68
TYRP1
FLAD1
SHC1
CKS1B
PTGER2
DACH1
CYB5B
CDK6
ST3GAL6
MTRNR2L1
FAM124A
DIPK1A
MMRN1
ABHD2
TMCC1
LIFR
RBBP5
LMO3
PHOX2A
MGARP
C2orf83
PHC2
IQCG
RPL35A
CKMT2
PWWP3A
OPRM1
GCSAM
SNX6
DCN
HNF4G
NRP1
GOSR2
CDIN1
RIIAD1
CELF3
DAB2IP
PRRT1B
MDFIC2
TAOK3
SUDS3
NFIA
NME7
BLZF1
PRKAG2
COX7A2L
MMP15
NUBPL
RPS12
GTDC1
SLC25A30
TNFSF18
LRRC69
AMBN
GPR162
HSD17B12
ATP11A
SEC61B
ALG2
ANTXR2
CPO
TCF4
CHRNA9
DNAJC12
PSMD12
GPER1
FOXP1
B3GAT2
PES1
RPS23
ATP6AP1L
PLAC1
CLDN11
HAO1
P2RY12
STOM
FAM219A
DNAI1
SMAD9
POU5F2
JUP
TIGD6
HMGXB3
TVP23C
TTC30A
TSNAX
NBN
ATF1
FARSB
SMIM3
GLYAT
PRR16
PRLHR
BRD4
LIMS1
FGF13
ANK2
IQSEC1
NUP205
ELAVL4
TMEM265
PSTPIP1
TES
KCNK2
RBFOX2
FAM187A
EFTUD2
CCDC103
DEFB131B
BLCAP
TMEM107
EVPL
GLIPR1L2
PLA2G4E
PLAC8L1
SOX5
RAPGEF1
POLR3F
DZANK1
ICA1
ABAT
DNAH8
MYO18B
CCDC182
SLC6A2
PKIB
GLDN
LOC283710
RNF19A
TECTB
ZNF608
C19orf48
STARD13
FGF1
PFKP
SRD5A1
CACTIN
NCOA7
MGAT5
COL3A1
DNM3
OR10R2
LYRM4
FARS2
TTC39A
KIF26A
NRXN1
CRYGC
OTOGL
TPD52
ZFPM2
SLC26A7
UBA5
HTN1
G3BP1
THBS4
BFSP2
SPOP
CFAP100
SCG5
FBXO8
CEP44
FAM104A
C17orf80
MSRB2
FRMD6
KCNV1
CHD1L
PRKAB2
LPIN1
NUP85
CDH12
RPL21
NGB
AGR3
CTBP2
RIMS1
TBPL1
TSHZ1
FCER1A
SLC22A8
UQCRQ
GDF9
POU4F2
GAST
LIG3
SYTL3
NELL1
NVL
TRMT2B
ANAPC7
RNF145
AFG1L
PPP1R12B
HEXB
GLCCI1
THNSL1
LEPR
THEMIS
TRIM55
ZNF77
MARCOL
RARA
TRDMT1
ANO3
MAPK1
BCL2L13
DHRS3
SYT4
SRGAP3
CALCA
LMO1
TRPA1
ADK
AP3M1
ERBB4
IL17F
EXOSC8
ALG5
PGBD3
PSPH
CCT6A
HHAT
SLC17A2
ADI1
PLXNA1
BRSK2
CDAN1
HABP2
PSMD1
PDAP1
BUD31
SPAG9
SPATS1
TVP23B
KRT19
ACKR4
SETD9
SYT2
GADD45A
EYS
EPC1
GOLGA5
SUPV3L1
TRAT1
SOBP
NFASC
TOX
HSPA9
GAB2
S1PR2
SLC18A1
FAM72A
PPM1E
NFKBIL1
DDX39B
ATP6V1G2
ZFHX4
FAM163B
ST6GALNAC5
PI4KB
OAZ3
MRPL9
BCAS1
UPF2
SLC6A5
TBC1D23
PCSK1N
CREB5
SNAPC1
PRDM7
SNX22
PRRT4
NECAB1
KRT15
MEI4
STK36
RNF25
LMO4
MYT1
NEDD4
ANKDD1B
C1D
SLC25A44
LRCH2
MRPS7
GGA3
KCNJ6
LRRTM4
SDCBP
RSPH1
SMIM28
TNIP3
DTD2
SF3B3
COG4
NUMB
LAPTM4B
HOXD13
HOXD12
PARP14
TMED1
TRIB2
TTC9B
CAVIN4
ACYP1
DCAF5
CYP51A1
GPR83
MAP3K3
SVOPL
TRIM24
DDAH1
SLC7A2
DYNC1LI2
CILP
DEFB136
B4GAT1
BRMS1
SRSF10
IL24
SMIM14
CHRDL2
SHD
IFT80
OSGEP
APEX1
TMTC2
HORMAD2
FAM135B
SLC23A2
RPS7
FLVCR1
CCDC68
ABR
KIF2B
RHBDD1
PACSIN3
TOMM70
LNP1
THEM5
CNKSR2
CLDN8
ANK1
SH3TC2
TLE4
PCGF1
LBX2
TXNRD1
B3GNT3
ESRRG
WBP11
C12orf60
HTR2B
PCDH15
RABL2A
PAK1IP1
C6orf52
SLC41A3
RIMS2
MCU
BEND4
CDC42EP3
SULF2
TAS2R50
VDAC2
PWWP2B
CLIP4
OIP5
NUSAP1
WDFY3
MPP4
SETD7
RFLNA
VWC2L
TRAF3IP3
CSMD3
AGPAT4
BCO2
KLHL24
TUBB8
C12orf56
DLG1
NOS1
VTI1B
PLSCR2
SSUH2
KIF25
ANKRD44
IRF6
CCNB3
AKAP4
EEF2KMT
HHEX
ATP11B
SMAD2
PRUNE2
VPS33B
PNP
TMEM108
PELI2
GNRH1
EIF3G
SRSF7
TRAPPC9
TSHZ3
SLAIN2
TMC3
GPM6B
ARID5B
SHMT2
STAMBPL1
SYT15
GYPB
SSPN
NDUFA4
DAZAP2
ESRRB
ATXN1
ZNF235
KCNJ16
CLCN5
GUCA1C
BAZ2B
RHOB
SMUG1
BOC
IGDCC3
GALNT14
OMD
ACTR10
VEZT
FGD6
KIF6
STEAP1B
TNPO1
SLC9A9
TIAM2
FOLH1B
FAM184A
TMEM229B
GC
KTN1
PRDM8
APOM
BAG6
ZBTB20
KLF7
GUCY1A1
KLHL6
FTCDNL1
PABPC4L
RNF111
PDZRN4
BAMBI
MKRN3
REXO1
WDR49
UGP2
GLRX
GABRA1
PSD3
PIN4
OLFML1
SLC12A3
PHACTR2
NT5DC2
ZFPM1
SMC2
IRS2
CHST1
RIMBP2
RBM11
CDO1
AP3S1
CTXN2
CDH4
DMXL2
EGFR
SUCNR1
PBX1
FYN
TESMIN
CYTH3
HEXIM2
PDE4B
SHC4
BICRAL
TBCC
DCTN4
CNOT8
TSPAN8
SLC19A2
FGF19
TYRO3
MTUS1
RNF34
ECT2L
C7
TCERG1L
GRIP1
SUMO4
PHOX2B
HADHB
HADHA
SLC12A6
RAB27A
IL13RA2
ZNF792
PPP3R2
SUCLG1
SPATA25
NEURL2
CTSA
FAM9B
MAP4
CCNI
SLC35B1
SCRG1
MAPKAPK5
CMSS1
DPYSL3
IRF2BP2
CDK14
SRSF2
MFSD11
GPR75-ASB3
GPR75
GPR1
SLC31A2
PTPRO
TAF1A
DOCK10
ARID3B
PHF6
HIPK1
METTL7A
RNF217
JMJD1C
MAPK10
TOM1L1
ZMYM1
TFPI
ODAM
PTPRH
TUB
HTR3D
AFF1
BBS9
C18orf32
HSD17B4
TPM1
CDCA7L
ABLIM1
PLPP4
HTR3A
STAM
GAS2L3
SAMD13
PACRGL
PCNX4
TBC1D9
MAST4
LUM
ADGRD1
SOCS5
ZRANB2
MTRF1
NAA16
OSR1
FGF14
SKP1
RFX8
CDK8
NCAM2
CROT
HAPLN1
SACS
RAB3D
TMEM205
CCDC159
PLCH1
NREP
MLLT11
CDC42SE1
CD46
OXCT1
PCNX1
RABL3
GTF2E1
DEGS2
GNPNAT1
PUS7L
IRAK4
DMD
VSTM2A
RABGAP1L
C8A
MAGEB10
TNFSF13B
RBP1
HMGCR
MLH3
CALHM5
SIRT4
TM4SF4
OSBPL7
FAM178B
CCKAR
CHODL
RAI14
ETFRF1
CFAP94
ARRDC4
SRP14
FITM2
C5
ALDOA
CLSPN
PALMD
RPS24
POLR3A
MAP2
KHDRBS3
ZBED3
ZNF8
RNF38
ZNF449
GPSM3
SIAH1
PBX2
PLCL1
TSHZ2
PRCD
SLC8A1
EPB41L4B
CLGN
FAM222A
CAPRIN1
KCNAB2
TMEM270
PKD1L1
NCDN
KIAA0319L
SGK3
APOH
WNK1
USP54
PAPOLB
OR8B4
PROSER1
NHLRC3
ASXL2
POP5
NEDD4L
ARHGEF12
FNIP2
ADD3
KCNH2
ATXN7L1
SLC4A8
GALNT6
ANKRD1
EFCAB2
RWDD3
MBNL3
PALM
SLC25A12
TMEM187
HCFC1
DGKK
TLE3
MECOM
GDF5
CEP250
SCG2
NEK7
TAMALIN
USO1
HAND2
TCIM
MYF6
MYF5
SNX16
NRG2
SPR
MEF2C
BANK1
FHL1
TOB1
MACROD2
H1-2
CD36
IMMP2L
HMX2
GGCT
BCL9L
NRG1
ACOT11
LCA5
P2RY6
ELAVL2
PTPRE
COPB2
NAIP
TBCK
AIMP1
BABAM2
MXRA7
FAM110B
CREB3L2
BPNT2
PNO1
L1CAM
CD74
PHACTR3
SULT6B1
CEBPZOS
GSTP1
SPATA9
RHOBTB3
IGFBP3
SLC28A3
SOAT1
KLHL13
ARHGAP19
RAG1
MGP
LSM11
NCOA6
SUPT20HL2
FEV
ARHGEF33
GFRA3
PRRC2C
RGS13
HEPHL1
PSMA8
AGBL1
ATF3
BACH2
ERP27
XPNPEP3
ST13
GORAB
MYO1B
EIF3A
MOB4
GSE1
TTC13
GRAMD1B
ZDHHC2
ASB15
SLC17A8
C16orf91
OSBP2
MAOB
EMC2
FMNL2
HEATR1
OR5K2
ADAMTSL2
RPL7
RDH10
TMEM182
SYTL5
OSBPL8
SEC24D
RIPOR2
ARHGAP21
PFN3
LRRN3
CAAP1
RAB27B
POPDC2
LOC102724488
ATP6V0E2
IGFBPL1
RHOH
APELA
RABGGTB
PDE12
AXDND1
CHD8
SLC39A8
LPP
DOC2B