ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671313 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◣ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

KNL1
MTRNR2L1
WDR74
SHF
DUX4
PPP6R3
PRMT5
B4GAT1
BRMS1
SACM1L
HMGN4
NDUFS7
MTRNR2L2
MSH3
DHFR
POLR3E
TRIM7
BORCS6
FRG2C
PCGF2
H4C8
DPP9
FBXO31
POLG
ILF2
CCDC107
LTA4H
LUC7L2
FMC1-LUC7L2
FMC1
METTL26
PSMA3
GSTA4
C8orf37
RAB11A
RNASE4
ANG
ELF1
WBP4
CNN2
TMEM259
HSPA6
STAT6
SMARCC2
RPS29
BCAR3
TTI2
PLXDC1
ZBED9
MTRNR2L8
FRG2
TBL1X
CASC3
PXK
PPEF1
RS1
POLDIP3
MED16
DHRS3
DDIT4
TPCN1
NCOA7
CSRNP1
MACC1
ZNF827
COL23A1
FAM227B
DTWD1
BZW2
ANKMY2
MYNN
ACTRT3
OSGIN1
TIA1
STX16
GTF2H2C_2
GTF2H2
TMEM107
RBFOX2
SELENOH
INTS12
GSTCD
PRKCE
GTPBP6
HES7
ALOXE3
OR1F1
ZNF839
ZSCAN22
GBA
SERPINE1
MYC
HMGB1
USPL1
YARS1
S100PBP
FIGNL1
SIRT4
KLRC3
SNAI2
FRA10AC1
PHLDB2
PLD1
TMEM248
NME1-NME2
NME1
IARS1
H4C15
H4C14
SYS1
ATXN2L
MAP3K20
EPB41
ANP32E
MAT2A
WNT9A
IER3
FLOT1
STX18
PSCA
FZD2
MRPS31
H4C12
PTPN21
URGCP
UBE2D4
EPN1
CDKN1C
ARHGDIA
RBBP5
MNAT1
SETD7
MRPL40
HIRA
LASP1
RPL37
NFIL3
GADD45A
NFE2L2
F2RL3
EIF4A3
ZBTB45
GTF2H2C
TRIAP1
SLC44A1
C17orf75
CCN5
JUNB
AAR2
RPGR
IRX2
C5orf38
CCL20
GABARAPL1
ABT1
KRT6A
SLC19A2
USP17L20
USP17L22
KLF7
FRMD3
UCHL5
RO60
CARD16
OR2T1
CCND3
DNAJC19
TAF8
MRPL53
LRRC59
PUS1
TRIB1
ARIH1
FAN1
METTL15
KIF18A
P3H1
PSMF1
TAMM41
ISLR2
NUF2
INO80C
LEMD2
CPEB3
CCNL1
GTF3C3
KRBA2
BTN3A2
H4C5
ARID1A
RANBP2
DTNA
HES1
MIDEAS
WDR36
MCIDAS
RPS7
NDUFS3
KBTBD4
KLF9
ROS1
MKRN3
CCAR2
C8orf58
WDR24
FUS
H1-2
EGFR
TACO1
SAR1B
SOD2
ZC3H10
RPL41
VEGFA
ATF3
MRPL17
AP3S2
TIMM44
HIF3A
EIF4G2
TOB2
MRPL21
IGHMBP2
DEF6
TLCD5
TBC1D16
H2AX
COMMD1
H3C8
H2BC10
VWA7
TPM2
STAT3
HAL
CFLAR
FAM43A
PPL
OPA1
OR14K1
ABCG1
NLRX1
MYBPC3
ZNF142
BCS1L
SEC13
H3C2
H4C2
SLCO2A1
IRF2BP2
JUN
FEM1C
RPA3
FAM107B
SRSF2
MFSD11
FKBP5
SYCE2
RNF207
SRSF6
MRPL44
STAU1
DDX27
BDKRB1
NOP53
COX16
LPIN3
LY6K
IGFBP6
SOAT2
WTAP
LRRC37A3
EIF1AD
BANF1
TBC1D19
RICTOR
SLTM
GPC1
HPD
PSMD9
ARMC12
POLR2C
ATP1B3
CITED2
TRAF7
LTBR
SCNN1A
ACSL1
ARHGEF12
PLIN3
SLFN5
HNRNPD
FEM1B
AQR
ID2
DRAP1
C11orf68
SSNA1
ANAPC2
GLIPR1L1
CAPS2
ADNP
MAP2K2
NUP50
BTG1
TP53I3
TES
THUMPD1
TCAF2
TMEM242
PTPRM
KDM6B
DST
BEND6
BCL3
TPK1
PARL
NUP107
SOD1
NDUFS4
FTH1
FUCA1
TSHZ2
MAML3
POFUT2
RPL22L1
MTREX
DHX29
TSPAN4
POLR2L
SRRM3
MAP4
EPRS1
YBEY
MCM3AP
FANCI
SCNN1G
ITGB3BP
EFCAB7
PRR5L
IL1R1
MPHOSPH10
MCEE
NECAP2
INTS6
MTF2
SLC24A1
INTS14
TNPO1
PAFAH2
CAMK2D
TRIP4
PEX3
ADAT2
SF3A3
ETS2
IMPDH2
SSRP1
P2RX3
PLCD3
ACBD4
SLC35A3
CALM2
DCP1A
CDPF1
NPIPB9
ZNHIT6
PHC2
RAD54L2
CTNNB1
MRPL39
PHACTR4
RSRP1
SERPINB2
LIMS1
ZNF460
ART4
IKZF5
ACADSB
CDK6
CCDC88B
SEC31A
TTC4
TAF10
TMSB4X
PDE4D
COPS8
CLUAP1
OSBPL8
C16orf90
PBLD
HNRNPH3
B2M
H4C4
TRAM1
PER1
SIAH1
HSP90AB1
POLR3B
NUP54
KAZALD1
RTN4
GYPC
GARS1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SELENOW
HYAL1
ZSCAN9
NAA80
HYAL3
SPSB1
BCAR1
S100A2
H4C11
SUMF2
GOSR1
SLC27A4
UBTD1
MMS19
NLE1
GPN3
FAM216A
NUDT9
NDUFB10
HPS5
GTF2H1
RPS2
ADK
HES3
ACYP1
ZC2HC1C
STMN3
RTEL1
NQO2
TSEN15
DSTYK
E2F7
IGF2BP2
CEP120
SLC33A1
ASH1L
GZF1
R3HDM2
INHBC
YPEL2
TMEM167B
NDUFA12
C19orf53
HOXA3
USP30
DUS2
DDX28
SURF6
NMT2
LIMS4
LIMS3
NR1H3
KDM2A
ACP2
TRIP11
HES4
PPP1R1B
AHCY
TRIB3
CCNC
HEXIM1
TMEM238
RPL28
TOMM5
NSUN4
RAD50
TGIF1
MED23
ASNS
RCC2
CAMKK2
TRMO
FAM160B1
H2BC5
H1-4
FAM126A
TMX4
CFAP410
MUC5AC
LSG1
SRSF4
CRYAA2
CRYAA
KANSL3
FER1L5
ZC3H6
LSM12
G6PC3
GPAT3
USP38
CETN3
KRT8
FOXJ3
DR1
USP48
TM2D1
PHF23
DVL2
PDPK1
SPRED2
SLC38A2
VPS33A
IL4I1
NUP62
ATF5
TMC1
H4C3
H1-6
CCND1
SNAPC5
PPM1A
KLHL20
FTL
DMAP1
TBC1D9
MGST1
WDR11
GPAM
MTERF1
ERCC1
NMNAT1
LZIC
DPY19L4
FBXO4
SRSF7
SREK1IP1
CWC27
MRPL22
GEMIN5
BIRC3
TUT1
ZMPSTE24
FBXL5
ZNF843
AXL
STK17B
ARL14EP
DCAF10
DNAJC9
PPA2
AARSD1
INA
ARID5B
ZNF696
FUT8
NUDT16
SMS
SMAD3
TAF12
MTIF2
PFKFB3
TFAM
RNF121
LOC100133315
NABP1
RPS15
MRPL12
SLC38A1
DBNL
GTF2A1
TMEM268
C12orf65
NFKBIZ
ABHD14B
ABHD14A-ACY1
ABHD14A
PCCB
ZNF385B
KLRK1
CTNNA3
ANK2
SEC22B
HTR5A
ZCWPW1
MEPCE
CCDC59
GATD3B
GATD3A
RAG1
ZNFX1
EIF3B
NCAPG
TMSB10
TRAF6
CXCL8
DNAJC24
DCDC1
SAMSN1
LPIN1
POLR2J3
R3HCC1
SSBP2
PCID2
CUL4A
SNRPD1
EXOSC6
RPL12
LRSAM1
NAT10
SMG7
RBM28
DYM
SLC7A11
SNX18
SLC7A2
IFTAP
SCYL3
RAG2
ZXDC
MT2A
TEX46
KDM1A
COMMD2
NDUFC2-KCTD14
NDUFC2
SCFD1
SVIL
SLC22A15
NFKB1
GIPC3
EIF2D
ZFP36L1
RAB5IF
MAP3K8
IL1RAP
SRSF1
MCAT
SLC16A7
NPAS4
TM4SF1
TRMU
HEXB
CAAP1
C2orf42
TBC1D4
VRK2
FGD4
CHPT1
EIF4EBP1
GPATCH1
SLC25A51
ZNF292
NREP
SMIM3
LRRC57
HAUS2
MRPS2
C9orf116
APTX
DNAJA1
HIP1R
CPNE8
ARID2
PARP2
STRA6
NGLY1
C6orf62
OXSM
EDC4
SOS1
RAB18
VSNL1
RPL32
FAT4
SLC35E2A
SPOP
CEMP1
CIAO3
PDE11A
MAP1LC3B2
RBM45
C17orf78
TMEM235
KMT2E
LTF
MTMR2
ALG10
DDX1
FNTA
ETFDH
C4orf46
ELF2
SNX17
EIF2B4
MDP1
CHMP4A
MOB4
PUM2
BRIX1
SOST
MBP
SMARCD3
MEF2C
NOL7
SLC39A1
FAM184A
CREB3L4
RBM18
MRRF
ETS1
PRPF39
HUS1
ZNF414
RFFL
TARDBP
BLOC1S6
AGK
U2SURP
COX7A2
TSSC4
CCDC174
GPBP1
SLC1A5
PMPCA
ENTR1
TTC26
G3BP1
POR
FAM162A
CCDC58
PRDM1
MEIS1
CDK5RAP1
SEC24A
STK40
INTS4
SPAAR
FBXW11
MRPL3
TOR1AIP2
TOR1AIP1
C1QTNF1
TMEM184A
HRCT1
NDUFS5
CHD1L
PRKAB2
MRPL58
USP8
UFL1
NUP153
EMP1
ZNF221
RAPGEF1
ANXA9
CERS2
TAB1
ZMYND8
MTLN
MSANTD3
FCMR
SH2B1
XYLB
C12orf43
TBX3
PLEC
LSMEM1
RSPH3
ZNF721
PIGG
MRPS35
PLK2
ADGRF5
PSMD3
WDR25
WARS1
FAF1
ERI1
PNP
INF2
RNF43
TM4SF19
MRPL35
IMMT
MCOLN1
TIMM17A
RPL5
RAP2B
MRPL48
B3GALT4
HARS2
HARS1
MAPRE2
ARMCX5-GPRASP2
ARMCX5
FKBP11
MEMO1
NDUFAF1
GEMIN8
ELOVL3
VPS36
CKAP2
MSL2
LSP1
CLCF1
HDAC7
CALM1
SLC39A8
SLC3A2
PLAAT2
CARD19
RPS4X
VIM
P2RX7
TEFM
STOML2
ACTN1
TNFRSF9
CD320
WDFY1
PPP1R15A
ANXA2
GFM1
BCAT1
BIN3
RNF150
TCHP
DUSP1
PTK6
DAGLB
MARCHF4
SPATA4
RINT1
LAMTOR5
SDAD1
LDLR
IQCH
AAGAB
SEL1L
HMGCR
RPL22
RPL13
ITPR1
TOLLIP
NOB1
MRPS16
ERCC6L2
ATXN1
SUGCT
MPLKIP
AHCYL1
PSG4
CLK1
RPLP1
TMA16
ITGB1
VPS25
C3
CP
GDF15
SDHAF3
ABCC3
DDX46
HDAC2
SAV1
BRF2
TAF5
KLRC2
NPIPB8
RXRA
NTMT1
PPP4R2
KCTD5
MTHFD2
RETSAT
PIWIL2
NUMB
ZNF23
TIAL1
CHIC2
RABGGTA
EGFLAM
YARS2
ENSA
PEX6
NNMT
PCBP2
SSH1
EIF2B3
SPATA25
NEURL2
CTSA
MRPL20
C7orf65
TMEM101
DYNC2I1
CCDC125
PCBP3
NIM1K
MINDY2
MTCH2
PPWD1
CENPK
CD36
HEY1
TRUB2
COQ4
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
POLR2E
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
TTC8
GOLGA5
SUPV3L1
IQCG
DPH6
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1