ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584304 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◣ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
NEUROG2
RABL2A
NUP205
ZP4
POLR3F
DZANK1
PSMD1
NME6
NEUROG3
MAPKAPK5
TBCK
AIMP1
NVL
HSPA9
POLR2E
NUP85
ARHGAP10
CACTIN
IPO13
HES3
DYNC1LI2
BLCAP
ZNF503
PES1
RWDD1
TAOK3
SUDS3
RPL21
FARSB
C19orf48
FAM187A
EFTUD2
CCDC103
VDAC2
GOSR2
PAK1IP1
C6orf52
MRPS7
GGA3
VTI1B
NCLN
SART3
ISCU
ACTR10
DCTN1
PSMG2
CEP76
PNO1
SEC61B
ALG2
SF3B3
COG4
HES1
EXOSC5
BCKDHA
SUPV3L1
UFM1
SKP1
TSN
IQCG
RPL35A
ATP5MG
PCBP1
TSNAX
PSMD12
ANAPC7
RPS27A
CLHC1
UPF2
SLC35B1
STAM2
STAM
LYRM4
FARS2
COX7A2L
REXO1
DPH6
SRD5A1
CDX2
ZNF576
IRGQ
ZRANB2
HADHB
HADHA
TMED1
RPS12
RBBP5
TTC8
VEZT
FGD6
SELENOF
HS2ST1
PI4KB
SMC2
CAPRIN1
MRPS5
FAM104A
C17orf80
XPNPEP3
ST13
ATOH1
PAF1
OSGEP
APEX1
IGFBP2
NDUFA4
BABAM2
RBKS
VARS1
LZTS1
EIF4ENIF1
GADD45G
GOLGA5
INSM1
ADK
AP3M1
PMAIP1
CCDC33
FRG2C
MALRD1
PDAP1
BUD31
USP1
RPS23
ATP6AP1L
RABGGTB
PROSER1
NHLRC3
PTGES2
ZDHHC1
TM9SF1
ICE1
DUX4
NFKBIL1
DDX39B
ATP6V1G2
LEFTY2
HOXA4
PHOX2B
KDM8
NEUROG1
SEC11C
BICRA
RPL7
RDH10
APOM
BAG6
CR1L
PIN4
BNIP3
RPS29
LRR1
SUCLG1
CACNA1D
STK36
RNF25
SULF1
ST18
ARHGAP11A-SCG5
ARHGAP11A
TMEM120B
PAX6
ABLIM3
KRT20
COMMD1
CCT4
CDX1
TAF9
RAD17
AK6
DLL4
OAZ3
MRPL9
FZD8
SLC10A2
OR6B2
NDUFA10
NEUROD1
TPM1
PANK4
HES5
CLDN2
EPHA5
PRUNE2
TCF7L2
TTYH1
LRATD2
CPSF4L
IGFBP6
SOAT2
CNTN1
UBE2I
DMBX1
DCTN3
ARID3C
SALL1
C16orf91
TPRA1
RPN1
CDC42EP2
GADD45GIP1
NUTM2D
FRG2
GORAB
HOXB3
HOXB4
SMC6
GEN1
ZNF383
PDE6B
ITIH4
MUSTN1
HOXD3
ERRFI1
RBBP7
PRRX1
TBC1D8
SPACA1
PDE12
WDR59
CCN1
SKIL
TESC
RAI14
DLX4
GAD2
SYBU
DSCAML1
MRTO4
EMC1
HHIP
CCDC200
FJX1
TIGD1
EIF4E2
HOXB1
HOXA3
PDHB
HOXA2
ALKBH5
CNPY2
FGF19
PAH
ASCL1
GTF3A
HES7
METTL24
KDM2B
PCBD2
NEK3
SALL4
ZNF746
KIF26A
PDHX
APIP
HNRNPA2B1
CBX3
ZFX
EIF2S3
RBPJ
PTGR1
CATSPERG
EVA1A
STOML2
ADGRL2
RPH3A
ZGPAT
ARFRP1
REV3L
STRA6
TMEM107
PDPN
CDON
HOXB8
HOXB7
KLF17
EIF2S1
ATP6V1D
ANK2
METTL11B
NOXO1
GFER
GFRA3
TSHZ1
ZADH2
GTF3C4
DDX31
AXDND1
LRIG1
CYP51A1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TLE4
BFSP1
TMEM14A
MYO10
CAMTA1
CLGN
MRPL38
THRA
RPS24
POLR3A
HNF1A
VOPP1
REC8
SNCG
MMRN2
OTX1
ID1
HOXC5
CDH16
HSPA1B
NFE2
CNTN4
DHX32
TMPPE
GLB1
ADM
RARB
LRGUK
MSX1
LIG3
LBX1
P2RX6
MEIS3
MEIS2
STK38
LIMCH1
DDX3X
LIN28B
PCDH11Y
SOX6
TPST2
ABCB5
PAX3
TLE3
AGO1
HOXA5
LRIG3
TLN1
CREB3
ALOX5AP
CPLX1
CPN2
CD99L2
DAAM1
SOX21
CSTF2T
TRABD2B
TCF4
QPRT
EIF4E3
ZFHX4
PANK2
ZNF367
H3C12
H2BC17
H2AC17
TYRO3
RARA
KAZALD1
SOX12
SH2D3C
BNIP2
RGS12
ANTKMT
METRN
BRWD1
HSPB8
USP17L20
USP17L22
PJA2
PLEKHA5
PAX8
GAS1
DAPL1
C12orf73
DLG4
ACADVL
PNKD
SOCS3
TTLL6
PLAGL1
PRDM12
PCBP4
RPS10-NUDT3
RPS10
SLC44A3
USP17L21
USP17L12
USP17L11
USP17L18
TTI2
SNX1
CIAO2A
NEDD9
FAM107A
NELFA
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SPATC1L
CYP26A1
ARID3B
CDC73
IER3
FLOT1
ID2
SP2
NDUFS7
DHRS3
SH2B1
KAT6B
DPP9
SPATA25
ERCC1
BBS9
TRIP10
GPR108
NEURL2
CTSA
DNAJB7
SPCS1
GLT8D1
H2AW
WDR74
HOXA1
TBX3
LIN28A
ASB2
DUSP6
PCGF1
LBX2
CDCA7L
TEPSIN
NDUFAF8
DNM2
FOXP1
ANKLE2
COL23A1
P4HB
RUNX1T1
TBX2
FBXO31
NPAS4
MLEC
MINDY2
HPD
TNFRSF19
CS
ANKRD28
SP5
TMEM70
ELOC
PDE4D
SYNPO
HUS1
SMAD3
CCNDBP1
MRPL34
LPIN1
ARHGEF28
RAB5B
ID3
KANSL3
FER1L5
KIF21B
STX18
TLE1
XKR7
ZFHX3
RXRB
PHC2
DONSON
DOLPP1
ARRDC4
HOXC4
PGK1
SLC39A7
CBFA2T2
ATF6
OTUD7B
SIRT4
MFSD10
UPF3A
KDM6B
KATNB1
SMPDL3A
SQSTM1
TMEM101
TRIB1
CCDC174
BAIAP2
PDZRN3
FRA10AC1
PPP6R3
ABHD2
ABCC10
RARG
NINJ2
ZNF687
SMARCD2
BCL3
POP5
RFX1
CLCN3
MYLK4
NR2F1
MTMR4
GATA4
GPCPD1
NRL
SRSF11
PCGF2
NBPF1
KCNAB2
TOP2A
CCNL2
PSPN
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
LRRC40
NUBP1
SACM1L
ADAP1
DYNLT1
ITGAV
FOXP2
FURIN
NFKBIA
ARSG
MIDEAS
TLE2
IQSEC3
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
DCAF11
HEXIM2
RASSF5
PXYLP1
SP1
PKDCC
PCNA
ZFAND2A
ZNF608
OSBP
NLK
PPCDC
ABHD8
STIP1
EIF2AK3
RNF207
DLG2
CSF3R
RHBDD1
HMGCS1
SOD2
AHDC1
MDM2
ATP5F1B
SLC45A4
PSMD6
RAB11B
KNL1
G3BP1
LPCAT3
KMT5A
NCOA2
EVI5L
CITED2
RTN4
TRAF7
MACROH2A1
FTL
JUP
PRDM10
DDA1
HNRNPD
GPC6
SREBF1
POLG
FAM107B
SMIM20
SLC7A5
DLC1
CRLS1
GRSF1
B4GAT1
TRIM46
MYRIP
MTF2
SHF
MBD6
DDIT3
MIDN
RBFOX2
PLEKHG2
SPG7
ARHGAP24
TPCN1
SEPTIN9
CCL26
GLRX5
PKN2
SSBP4
FST
DAGLB
SLC6A12
LCK
FAM167B
GADD45A
CBX5
TMEM94
BAHCC1
SEC22B
CCDC43
RGS3
ARAP1
KDM3A
INAVA
ZFP36
NCDN
KIAA0319L
PRMT5
EIF3D
ATP6V1E2
SLC30A4
STAP2
ACYP1
MYEOV
HPCAL1
SH3YL1
ACP1
ABCA4
DIABLO
FGR
ZBTB18
MRPS28
PLEC
RAB37
COX5A
STX1A
SERPINB1
SERPINE1
HOXC6
LRCH4
FBXO24
RHOQ
GMEB2
ARID2
HMGB1
ANKMY1
CEP41
CIC
FRMD3
ARHGAP4
HNMT
ARID5A
CAPNS2
UGP2
CNKSR3
KMT2A
NKD1
CPT1A
ROGDI
DNAJB3
LTBR
KIAA0319
BRMS1
MRPS24
TRDMT1
SYNJ2
LAPTM5
ARHGEF10L
TES
PHETA1
RNF166
KCTD7
EFEMP2
LNPEP
RAC1
CDS2
INSM2
EIF4H
CSRNP1
MBD2
CMSS1
USP42
INAFM2
ARID4A
ANKRD1
DUSP9
ILF2
LFNG
LIMA1
ARL8A
IFI16
TXNDC11
ZNF414
TDRKH
TUBB4B
TXNRD1
HTR5A
AIFM2
EVPL
SEC14L1
SYTL3
HIBADH
CERK
IKBKB
WTAP
LMNA
ZNF76
LUC7L2
LRP5L
PRKACA
UBE2F
LAMP1
SORBS2
NRSN2
NR2C1
MSX2
KLHDC2
MT2A
IL6R
NRM
SLC35A3
BHLHE40
COMTD1
CXCR4
TCTEX1D4
BTBD19
IQGAP2
CFL1
TUBGCP3
CDK6
RBM15
SH2D6
UACA
ZNF77
CCDC88A
RNF34
USPL1
CCDC88B
RNF149
NRCAM
GSTP1
RNPEPL1
NRXN1
EPM2A
SH3BP2
IRF9
PIKFYVE
PIGV
ZNF3
H6PD
ING1
GOT1
TBL1X
TMEM60
PHTF2
RASSF2
ZDHHC4
MYADM
EIF1B
CCL16
KRI1
CDKN2D
E4F1
ANKS4B
CBX4
NANP
USP3
KCNH7
CYB5R4
TF
DCAF7
NKIRAS1
CHD8
KLF6
TRAF4
WDR97
MAF1
SCAP
NCOA7
ZNF595
ORMDL3
CRKL
SEMA5B
OPRM1
POLR3E
GFOD1
PKM
TUBB
INHBE
NKX1-1
GPAA1
EXOSC4
YTHDF2
ZNF827
MARCHF3
CXXC5
STX16
ATP2B2
RNF144A
CASC3
CLK1
PC
ICAM1
ATG16L1
ERI3
SMIM11B
SMIM11A
CEBPE
TRIM7
CDC42EP3
RXRA
TSPAN4
POLR2L
NFE2L1
NCBP2AS2
NCBP2
ENO1
SRSF2
SLC25A19
MFSD11
KPNA4
UGT1A1
FAAP24
CEP89
IRS1
GSN
PCTP
PARK7
HECTD4
UNC13D
ATP5MC1
TRAF2
PLEKHF2
TACC1
TCHP
L1CAM
ANP32E
CELSR3
MPND
ACVR1
PXMP4
MPC1
TTC30B
GPT2
GGT1
NEO1
CCDC114
SH3BP4
HSP90B1
C14orf93
ZC2HC1C
ETV4
PAQR8
DUSP12
UBE2C
SRCAP
LOC730183
GPATCH8
DGKZ
RHBG
DDX1
ETFBKMT
CALM2
GBA
RTBDN
DBX1
LMO4
FAM24A
HNRNPC
TMC6
TANK
GPR35
RAB17
LASP1
FLAD1
ZCWPW1
TMTC4
SLC25A6
MEPCE
ALDH4A1
ATP23
MPV17L2
IL6ST
CBFA2T3
MAP1LC3B
UBXN10
SDSL
SCYL1
POLR2J3
ARNTL
LYL1
SHB
CCDC59
KMT2E
STARD4
H4C12
MVD
FILIP1L
HSPE1-MOB4
HSPE1
HSPD1
CYCS
DEAF1
ZNF148
PRAM1
CCDC38
AMDHD1
ZCCHC3
SNX3
MTRF1L
SLC25A25
PRR14
YARS1
S100PBP
PACSIN2
TMC8
LRRC59
CCDC107
DNAJB1
ATP5MPL
FAM72A
ELOVL6
RFX8
HNRNPUL1
ERBB2
TOMM40
AK2
RMDN3
CAT
SERPINB9
ZNF740
SHC1
CSAD
CKS1B
TCERG1
TMEM59L
CRLF1
PITPNM1
ARIH2
MAPKAPK3
KPNB1
FMC1-LUC7L2
FMC1
PEX14
DFFA
GRWD1
PLEKHO2
LRRN4
TMC7
PGP
LDLR
BRICD5
MLLT6
CMTR1
C8orf37
DCP1A
STAT3
KHSRP
NAT8
BCAR3
WBP1L
BAZ1B
FAM227B
DTWD1
DNAJB8
ABCB1
INPP5D
NRSN1
IGF2BP3
WDR18
FAM228B
FGG
PCM1
TYROBP
GATD3B
GATD3A
NRP1
ARHGEF1