ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662634 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◣ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
TEPSIN
NDUFAF8
SP2
DOLPP1
DNM2
ARRDC4
OSBP
KATNB1
RAB5B
SP1
P4HB
ZNF687
STIP1
NLK
RFX1
ANKHD1-EIF4EBP3
ANKHD1
UBE2C
EVI5L
ACTL6A
TOP2A
GOT1
G3BP1
ARID4A
HSP90B1
TMEM94
STT3A
PXMP4
TCERG1
ARNTL
JUP
GLRX5
EIF2AK3
SKA2
PRR11
TDRKH
ATP5F1B
MPV17L2
PITPNM1
PRR14
ARMC1
KAT7
RBM27
TMEM60
PHTF2
SNRPF
TMEM218
HSPA5
TUBB4B
HNRNPUL1
DROSHA
C5orf22
MYLPF
TBC1D10B
PRICKLE3
TRAF2
ZFYVE21
XRCC3
ATP5MC1
FLAD1
MSANTD4
H2AZ2
ILF2
MVD
RECQL
GOLT1B
PDK2
COQ8A
MTMR4
WDR97
MAF1
STAP2
MPND
HNRNPL
TMX2
MED19
HNRNPC
RFWD3
NCDN
KIAA0319L
PGK1
CRIP1
TEDC1
VIRMA
METTL17
SEL1L
PSPN
ALKBH7
FAAP24
CEP89
SHC1
CKS1B
CIC
PSMD4
CHCHD6
KPNB1
TOM1L2
DRC3
PHPT1
MAMDC4
ANAPC5
DCAF7
SERP1
EIF2A
MED24
FAM72A
SRGAP2
KAT6B
TOMM40
OS9
PRKACA
TMEM70
ELOC
TRIP10
GPR108
TMEM160
ZNF77
ZSWIM3
ACOT8
SPAG7
PGP
BRICD5
C16orf95
RNF5
AGPAT1
SPSB3
IMMP1L
ELP4
SLX1B
SLX1A
BOLA2B
BOLA2
UNG
ALKBH2
PROSER3
HSPB6
PPWD1
CENPK
EEF1AKNMT
TBCCD1
DNAJB11
AK2
KHSRP
NCBP2AS2
NCBP2
NFATC2IP
MTMR12
PITX3
GBF1
HIKESHI
SLC25A25
NAIF1
SARNP
ORMDL2
INCENP
CAMTA1
DNAJC14
NUMB
BOLA2-SMG1P6
ABHD2
TICRR
AP3M2
KCTD2
ATP5PD
PWWP2A
FRYL
KHDC4
CNOT1
SPTLC2
AKR1E2
PRPF40A
ARL6IP6
PAN2
IL23A
ZNF143
BCAS3
YIF1A
TMEM151A
UBALD2
H2AX
LRRC45
CENPX
ATG9B
ABCB8
GOLPH3L
CENPF
CNOT3
DCTN4
DCUN1D4
ZWINT
COPZ1
FDPS
ANP32A
PCP2
XAB2
ZSWIM4
TMEM217
TBC1D22B
SRP9
HBP1
LRCH4
FBXO24
GOLGB1
MSMO1
MANF
RBM42
ETF1
TYK2
CCDC146
NUP107
PRRC2B
ENSA
PHB
ZNF688
MTFR2
ALKBH3
ZBTB5
ZFYVE26
RAD51B
CGGBP1
NDUFB3
FAM126B
ZNF654
SIN3A
SIRT2
NFKBIB
CYB5B
NDUFA2
IK
FAM126A
BUB3
INTS4
CBX5
FAM72C
SRGAP2B
FAM72D
HNRNPA1
YJU2
PAIP2B
NFE2L1
FARSA
CALR
KDM4B
HGS
ARL16
CDC23
IARS1
ZMAT2
WBP1L
MSTO1
PNPO
PPP1R3F
FOXP3
MAP3K3
RPLP0
ZSWIM1
SSR3
BRIP1
MTR
UBE2T
WDR25
WARS1
SLC25A42
TMPO
MCM3
PCGF2
RBM48
PEX1
SPRING1
RNFT2
ECT2
CEP131
THAP1
POGLUT2
BIVM
IGSF9B
FRG2C
ISY1-RAB43
ISY1
CENPA
CYCS
FAM161B
COQ6
CHCHD2
F11R
PPP2R5A
TROAP
WDR89
IFT27
ACAP2
MORN4
PANK2
DDX49
COPE
LARS1
WIPI1
IBTK
GLCCI1
RAP2A
PLEKHA8
SLC33A1
HMGCS1
GPR137
RPS20
SCNM1
LYSMD1
ZNF555
VPS26B
NCAPD3
NRL
DCAF11
ZDHHC16
EXOSC1
CDKN3
NUDT2
KIF24
H3C10
H2BC13
H2AC13
NUF2
TCF19
CCHCR1
ZNF785
USP16
GATAD2A
KDM4D
CWC15
USHBP1
BABAM1
KLHDC10
SRPRA
ABL1
DNAJB5
KANSL1
CNEP1R1
RAB4B
MIA
ZBTB3
RNF41
NABP2
DDOST
PCYOX1L
BOD1L1
UVRAG
FBH1
ANKRD16
MLH1
EPM2AIP1
ISOC2
LZTFL1
TNRC6B
NME7
BLZF1
SPC25
FDFT1
TMA7
CCDC51
H3C15
H3C14
H2AC19
H2AC18
LENG1
LMAN2
RPL27
CKS2
NDUFAF2
ERCC8
PER1
LCMT1
TIMM17A
FRMD5
WBP1
INO80B
VCP
CNPY3
HNRNPAB
MYH10
PDCL
DICER1
H2BC12
H2AC12
INTS3
OPA1
DCAKD
HYLS1
NMT1
TTLL5
ERG28
TXNIP
TSACC
CCT3
RTRAF
POC5
PCNX3
MAP3K11
EXOC4
TLE3
FRA10AC1
ZFAND2A
ZNF595
ZNF691
RBM8A
MRPL34
DDA1
CYLD
PRMT1
PICK1
EIF5
SPRYD3
CHD6
ALKBH6
LOC101927572
RAB11B
KMT5C
WDCP
USF3
STARD4
BRAP
ACAD10
UBP1
DHX8
RUVBL1
ENPP5
ZNF57
KCNAB2
MNS1
PDXP
PARPBP
NUP37
WDR45
HMGCR
ZBTB9
RUBCN
KRR1
LAPTM4A
LINC02210-CRHR1
TRAFD1
CDCA8
C1orf109
TPD52L2
ABHD16B
GATAD2B
UNK
H3-3B
ARHGAP19
STIL
TOM1
NGDN
ETV5
RARS2
ORC3
ASF1B
SETD3
CCNK
RGMB
RMI2
EIF1AD
BANF1
LTN1
PSMA5
FAM156A
HAGH
FAHD1
FAM156B
CCDC77
PPOX
DGLUCY
RPS6KA5
UBE2J2
CDK5RAP3
GSK3B
SAP30L
TOGARAM1
KLHL28
RRBP1
JPT2
INTS1
SLC2A8
TMEM97
KIF20A
BRD8
TXNL4B
DHX38
DDX39A
NUCKS1
SF3B5
KLF6
ANP32E
SNRPA
C19orf54
STX18
XPO1
RRN3
SLC25A28
TMED10
UMAD1
YBX1
ZNF626
FRG2
TIMMDC1
TTBK2
TIMM10
TPX2
BAZ1B
CKAP5
RBM14-RBM4
RBM14
H4C12
ATP6V0B
DPH2
TTC14
FAM204A
ASPM
DLGAP5
TMEM248
HSD17B12
UTP23
STK40
TTC16
PTRH1
RPS21
MRPL24
WDR81
PMS2
AIMP2
AP2A1
TSKS
C8G
LCN12
ZNF8
CKAP2L
VBP1
ESR2
TPCN1
HIBADH
GFM1
IQCD
OTUD6B
RAB3A
NEMP1
LAS1L
NOL6
RWDD1
CALR3
C19orf44
EIF4A1
ZNF141
MAP3K13
MVK
GMNN
DDT
YIPF4
MCCC1
PIP4P1
TPRKB
BAHCC1
POP5
ZBTB32
KLHL20
PEX12
GET3
PNN
TRAPPC6B
ARL17B
ARL17A
SAP30BP
RECQL5
STAT2
APOF
MZT1
BORA
CREBRF
RBM15
NEK2
MFAP3
FAM114A2
GRK6
PHF12
ALG10B
ZMYM5
BPGM
MCM10
USP42
ERI3
SLC25A19
ZNF564
PLPBP
RPL18A
RAB5C
RPN2
MROH8
SRGAP2C
FAM72B
PDIA4
ZCCHC17
SNRNP40
SAMM50
SDF2L1
ALG8
NAT16
ZNF91
FAM222B
GHITM
H2BC7
H4C5
TCTN3
KBTBD8
PSMA3
EIF3F
FBXO31
MAP1LC3B
ZNF774
SSBP1
SCAI
TMEM45A
RAD54L
PPM1B
TXNDC16
GPR137C
MDM1
CFAP43
ZBTB6
ATP7B
ALG11
VPS4B
PMF1-BGLAP
PMF1
ZNF574
GID4
ATPAF2
DCLRE1C
VEZT
FGD6
EFCAB6
PAF1
RPL37
PRADC1
CCT7
WDR53
FBXO45
KIF1B
DNAJC25-GNG10
DNAJC25
ZNF680
STX16
SAMD10
PRPF6
DAZAP2
THYN1
ACAD8
DDTL
FBXO5
RND1
FAM117A
ZNF727
NCOA2
GGCT
PABPN1
BUB1
SENP2
COX14
MRPS30
NDUFS8
ZBTB26
ARL14EP
RAD54B
TMCO1
SCFD2
SYS1
FRG1
ZNF384
WBP2
PRCC
NF2
CLNS1A
PPP2R5E
ZC3H10
RPL41
STXBP5
TIPRL
ZNF830
CCT6B
TRMT6
MCM8
PIN1
PGBD4
EMC7
FAM83D
ZNF875
SELENOK
RRP9
PARP3
SZT2
MED8
EIF3M
GINS1
OTUD5
CDC6
TMEM199
POLDIP2
NFYC
FER
RTN4IP1
QRSL1
C5orf51
CCDC66
WHAMM
FSD2
KDM4A
AAR2
TWNK
MRPL43
CIART
CWF19L1
UGP2
EHBP1
FNBP4
TNFAIP1
IFT20
ELK1
SLC46A3
H4C3
H1-6
CAND1
FRS2
CTNNBL1
CD2BP2
LMCD1
SMG5
TMEM79
OXSR1
DDX41
GINS2
PTBP1
CEP164
ATG9A
ANKZF1
ZNF138
CANX
PC
EXD1
CHP1
VASN
FUT8
DNAJC24
DCDC1
RLN2
ARL6IP1
TMED7-TICAM2
TMED7
STARD3NL
KCTD16
YIPF5
H2AW
TMBIM6
PA2G4
H2BU1
PTMA
SETD5
CIT
GABPA
ATP5PF
SF3B4
WDR46
PFDN6
PARL
TADA1
NHP2
SLIRP
ALKBH1
ORC2
CCDC61
GTPBP6
UCKL1
BTD
PODNL1
DCAF15
HACL1
RPS26
RNF34
CACYBP
CLP1
KIF18B
ATF7-NPFF
ATF7
ZNF736
DYNLL1
MBD1
C22orf39
ANAPC15
NUDT5
CDC123
PSMB7
ARHGAP1
TFB2M
CNST
TESK2
SIVA1
ZNF408
GSTO2
SLC25A32
DCAF13
IVD
RNF181
MYH14
RLN1
GTPBP4
COQ7
VTA1
NMBR
MON1B
ZNRD2
FAM89B
TTC31
CCDC142
L3MBTL2
FAR1
LOC100421372
HSPA14
CDNF
PI4K2A
MAT2B
ULK4
RAB3C
PSPH
CCT6A
SLC39A9
ERH
TTC33
PUM3
TMEM38A
SMIM7
PSMA6
COX16
OSCP1
ZNF85
RPS7
ANXA6
DNAJC19
TTK
RALA
NAT10
ETFDH
C4orf46
SRSF2
MFSD11
GTF2H3
EIF2B1
COG3
ARAF
NUDT16
SF3A3
SLC25A36
RPS14
SFXN5
ZNF302
MED30
EIF2B2
UQCC1
C6orf89
TUT1
WDR74
BMS1
XRCC4
TMEM167A
OGFOD1
NUDT21
PSMC3IP
DDX50
MRPS23
CGRRF1
ZSCAN20
H2BC8
H2AC8
ZNF304
METTL18
C1orf112
TBRG1
LRRFIP2
TYW1
SBDS
MRPS28
DSTYK
RABL3
GTF2E1
CCDC174
PPIP5K2
GIN1
MTRNR2L8
CCDC59
H4C11
BRCA1
IDI1
ADAMTS15
PFDN5
MYG1
ALG10
TRMT10C
CYTH2
CSTF1
AURKA
GTF3C5
SNRPE
DARS2
CENPL
SCOC
CNNM2
FBXO38
ERV3-1-ZNF117
ERV3-1
NUMA1
LRTOMT
DUX4
TRAPPC6A
BLOC1S3
GORAB
ING1
CDC25C
PCF11
ZNF718
ITFG2
CDK13
MMUT
CENPQ
ZNF430
CENPM
CSNK1G1
SDHAF2
CPSF7
WBP11
C12orf60
SKIV2L
NELFE
NUP42
KNOP1
IQCK
UTP25
VPS35
TOMM70
LNP1
NKIRAS1
RPL15
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
POLR2E
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52