ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◣ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
NME6
PSMD1
IPO13
ZNF335
NCLN
DYNC1LI2
TAOK3
SUDS3
CACTIN
RWDD1
NUP85
NEUROG2
VTI1B
VDAC2
POLR2E
MRPS7
GGA3
FAM187A
EFTUD2
CCDC103
HSPA9
NUP205
PSMG2
CEP76
TSN
TBCK
AIMP1
NVL
GOSR2
REXO1
DCTN1
TSNAX
STAM2
RPL21
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
C19orf48
SEC61B
ALG2
PES1
STAM
CAPRIN1
PNO1
SRD5A1
RBBP5
BLCAP
SLC35B1
UPF2
FARSB
LYRM4
FARS2
ACTR10
ATP5MG
PCBP1
NEUROG3
PAK1IP1
C6orf52
NDUFA4
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
ANAPC7
LBX1
PI4KB
SART3
ISCU
PDAP1
BUD31
UFM1
MRPS5
ICE1
IQCG
RPL35A
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
RABGGTB
ADK
AP3M1
BABAM2
RBKS
USP1
PROSER1
NHLRC3
FAM104A
C17orf80
SMC2
EIF4ENIF1
OSGEP
APEX1
FRG2C
XPNPEP3
ST13
RPS12
RPS27A
CLHC1
BICRA
HES3
PAF1
ZNF503
UBE2I
COMMD1
CCT4
TM9SF1
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
MRTO4
EMC1
ATOH1
ARHGAP11A-SCG5
ARHGAP11A
FZD8
DCTN3
ARID3C
PIN4
APOM
BAG6
RPS29
LRR1
NEUROD1
RBBP7
GTF3C4
DDX31
INSM1
NFKBIL1
DDX39B
ATP6V1G2
DUX4
C16orf91
ARHGAP10
RPN1
FRG2
ARHGEF1
CCDC33
SUCLG1
NEUROG1
CDC73
EIF2S3
OAZ3
MRPL9
ANKLE2
TAF9
RAD17
AK6
SKIL
PMAIP1
TPM1
PCBD2
CDX2
PDHX
APIP
SEC11C
RPL7
RDH10
CR1L
LPIN1
GADD45GIP1
PRUNE2
PTGES2
ZGPAT
ARFRP1
EVA1A
STK36
RNF25
ZP4
PRDM12
DLX4
ALKBH5
IGFBP2
KDM8
ZNF383
SRSF11
LRRC40
ANK2
NOXO1
GFER
CNPY2
DBX1
TLE2
SH2B1
PDHB
CCDC200
GORAB
FGF19
TMEM70
ELOC
AXDND1
RYBP
LRATD2
ERRFI1
ECM1
KIF26A
CCN1
KIF21B
WDR59
TRABD2B
EIF4H
RBPJ
NELFA
SLC7A5
HOXB1
CLDN2
PDE12
MYLK4
RGS12
SULF1
MEIS2
TEX46
KDM1A
DMBX1
DTX4
CASC3
DLL4
PRRX1
BFSP1
CLEC18C
KDM2B
MYRIP
RAI14
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
HSPA1B
SYNPO
TBC1D8
LRGUK
TMEM120B
MALRD1
BRWD1
PDE6B
CLGN
TLE4
ZNF746
JAKMIP1
DDX3X
TPRA1
TIGD1
EIF4E2
TESC
HOXB3
HOXB4
NUTM2D
GFRA3
POP5
ZCWPW1
MEPCE
NRDE2
HOXA4
CDIP1
ID1
HOXD3
IGFBP6
SOAT2
DGKZ
MRPL38
CCNDBP1
ARL14EP
CS
C12orf73
GTF3A
NRXN1
FAM83E
SLC7A6OS
PRMT7
SPHK2
RPL18
SLC10A2
USP17L20
USP17L22
CNTLN
PNKD
DAPL1
PCBP2
VOPP1
SMPDL3A
SOX21
SYBU
NCBP3
RPS10-NUDT3
RPS10
ZFHX3
PAX8
GATA3
CCDC43
FOXP2
LRIG1
ZNF341
RNF138
SFT2D2
GADD45G
SOCS3
B3GALT5
DMRT3
ACBD6
RNF32
SKOR1
ADGRL2
GPT
MFSD3
NEUROD4
RASL10B
ERCC1
RPS26
WDR47
CHN2
CPVL
DUSP2
DAAM1
MXI1
GAD2
NPAS4
SRRM3
CDH16
CALHM6
ZNF292
RARA
CATSPERG
SLC39A6
BAIAP2
C12orf42
TMEM107
HNRNPA2B1
CBX3
ITIH4
MUSTN1
TCHP
VANGL2
PKNOX2
E2F6
CHD8
TPST2
HNF1A
CPLX1
OR8J1
AP1B1
ZBTB25
ZBTB1
MYO10
CNN3
CDX1
SPACA1
LRP2
CDC42EP2
SGK3
DNAJB2
ID2
PEX2
SALL1
CLEC18B
SEMA4B
ZNF891
ZNF10
CAMTA1
HNRNPD
UGT8
EVI5
ITPRIP
RUNX1T1
RPS24
POLR3A
HHIP
KMT2A
MSX2
DHX32
MGST1
RHBDD1
TRDMT1
RCOR1
HEY1
ZNF783
FTCDNL1
KAT6A
CEP41
TUBB3
SEMA6D
PLXNB1
TBC1D15
RGL1
POLR2J3
MET
CEMP1
ARHGEF28
NEK3
ZNF367
USP17L15
YAP1
SLC25A6
USP17L21
USP17L12
USP17L11
USP17L18
MTRNR2L1
RARB
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SPATC1L
CYP26A1
ARID3B
NFE2
HOXA3
IER3
FLOT1
SP2
NDUFS7
DHRS3
KAT6B
DPP9
SPATA25
TLE3
LEFTY2
TRIP10
GPR108
NEURL2
CTSA
DNAJB7
H2AW
PHOX2B
TTI2
WDR74
HOXA2
ST18
HOXA1
TBX3
LIN28A
ASB2
DUSP6
PCGF1
LBX2
CDCA7L
METTL24
TEPSIN
NDUFAF8
DNM2
FOXP1
COL23A1
P4HB
TBX2
FBXO31
MLEC
MINDY2
HPD
TNFRSF19
ANKRD28
SP5
PDE4D
HUS1
SMAD3
MRPL34
RAB5B
ID3
KANSL3
FER1L5
STX18
TLE1
XKR7
RXRB
PHC2
DONSON
DOLPP1
ARRDC4
HOXC4
PGK1
SLC39A7
CBFA2T2
ATF6
MSX1
OTUD7B
SIRT4
MFSD10
UPF3A
KDM6B
KATNB1
PANK2
SQSTM1
LZTS1
TMEM101
TRIB1
CCDC174
PDZRN3
FRA10AC1
PPP6R3
ABHD2
ABCC10
RARG
NINJ2
ZNF687
SMARCD2
BCL3
RFX1
CLCN3
NR2F1
MTMR4
QPRT
GATA4
GPCPD1
ZFHX4
NRL
PCGF2
NBPF1
KCNAB2
TOP2A
CCNL2
PSPN
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
NUBP1
SACM1L
ADAP1
DYNLT1
ITGAV
FURIN
NFKBIA
ARSG
MIDEAS
IQSEC3
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
DCAF11
HEXIM2
CNTN1
RASSF5
PXYLP1
SP1
PKDCC
PCNA
ZFAND2A
ZNF608
OSBP
NLK
PPCDC
ABHD8
STIP1
EIF2AK3
KAZALD1
RNF207
DLG2
CSF3R
HMGCS1
SOD2
AHDC1
MDM2
ATP5F1B
SLC45A4
PSMD6
RAB11B
KNL1
AGO1
G3BP1
LPCAT3
KMT5A
NCOA2
EVI5L
CITED2
DSCAML1
RTN4
TRAF7
MACROH2A1
FTL
JUP
PRDM10
DDA1
GPC6
SREBF1
POLG
FAM107B
SMIM20
DLC1
CRLS1
GRSF1
B4GAT1
TRIM46
LIG3
MTF2
SHF
MBD6
DDIT3
MIDN
METTL11B
RBFOX2
PLEKHG2
SPG7
ARHGAP24
TPCN1
SEPTIN9
CCL26
GLRX5
ANTKMT
PKN2
SSBP4
FST
DAGLB
SLC6A12
LCK
FAM167B
GADD45A
CBX5
TMEM94
BAHCC1
SEC22B
RGS3
ARAP1
KDM3A
INAVA
ZFP36
NCDN
KIAA0319L
PRMT5
EIF3D
ATP6V1E2
TLN1
SLC30A4
CREB3
STAP2
ACYP1
MYEOV
HPCAL1
SH3YL1
ACP1
H3C12
H2BC17
H2AC17
ABCA4
DIABLO
FGR
ADM
ZBTB18
MRPS28
PLEC
CYP51A1
RAB37
COX5A
STX1A
SERPINB1
SERPINE1
SNCG
MMRN2
HOXC6
LRCH4
FBXO24
RHOQ
CACNA1D
GMEB2
TCF7L2
ARID2
HMGB1
ANKMY1
CIC
FRMD3
ARHGAP4
HNMT
ARID5A
CAPNS2
UGP2
CNKSR3
NKD1
CPT1A
ROGDI
DNAJB3
LTBR
KIAA0319
BRMS1
MRPS24
SYNJ2
LAPTM5
ARHGEF10L
HOXC5
TES
PHETA1
RNF166
KCTD7
EFEMP2
LNPEP
RAC1
CDS2
INSM2
CSRNP1
MBD2
CMSS1
USP42
INAFM2
ARID4A
ANKRD1
DUSP9
ILF2
LFNG
LIMA1
ARL8A
IFI16
TXNDC11
ZNF414
PLAGL1
TDRKH
TUBB4B
TXNRD1
HTR5A
AIFM2
EVPL
SEC14L1
SYTL3
HIBADH
CERK
IKBKB
WTAP
LMNA
ZNF76
LUC7L2
LRP5L
PRKACA
UBE2F
LAMP1
SORBS2
NRSN2
NR2C1
KLHDC2
MT2A
IL6R
NRM
SLC35A3
BHLHE40
COMTD1
CXCR4
TCTEX1D4
BTBD19
IQGAP2
CFL1
CPSF4L
TUBGCP3
CDK6
RBM15
SH2D6
UACA
ZNF77
CCDC88A
RNF34
USPL1
CCDC88B
RNF149
NRCAM
NEDD9
GSTP1
RNPEPL1
EPM2A
SH3BP2
IRF9
PIKFYVE
PIGV
ZNF3
H6PD
ING1
GOT1
TBL1X
PAX6
TMEM60
PHTF2
RASSF2
ZDHHC4
MYADM
EIF1B
CCL16
KRI1
CDKN2D
E4F1
ANKS4B
CBX4
NANP
USP3
KCNH7
CYB5R4
TF
METRN
DCAF7
NKIRAS1
KLF6
TRAF4
WDR97
MAF1
SCAP
NCOA7
ZNF595
ORMDL3
CRKL
SEMA5B
OPRM1
POLR3E
GFOD1
PKM
TUBB
INHBE
NKX1-1
GPAA1
EXOSC4
YTHDF2
ZNF827
MARCHF3
CXXC5
STX16
ATP2B2
RNF144A
CLK1
PC
ICAM1
ATG16L1
ERI3
SMIM11B
SMIM11A
CEBPE
TRIM7
CDC42EP3
RXRA
TSPAN4
POLR2L
NFE2L1
NCBP2AS2
NCBP2
ENO1
SRSF2
SLC25A19
MFSD11
KPNA4
UGT1A1
FAAP24
CEP89
IRS1
GSN
PCTP
PARK7
HECTD4
UNC13D
ATP5MC1
TRAF2
PLEKHF2
TACC1
L1CAM
ANP32E
CELSR3
MPND
ACVR1
PXMP4
MPC1
TTC30B
GPT2
GGT1
NEO1
CCDC114
SH3BP4
HSP90B1
C14orf93
ZC2HC1C
ETV4
PAQR8
DUSP12
UBE2C
SRCAP
LOC730183
GPATCH8
RHBG
DDX1
ETFBKMT
CALM2
GBA
RTBDN
LMO4
FAM24A
HNRNPC
TMC6
TANK
GPR35
RAB17
LASP1
FLAD1
TMTC4
ALDH4A1
ATP23
MPV17L2
IL6ST
CBFA2T3
MAP1LC3B
ABLIM3
UBXN10
SDSL
SCYL1
TCF4
ARNTL
LYL1
SHB
CCDC59
KMT2E
STARD4
H4C12
MVD
FILIP1L
HSPE1-MOB4
HSPE1
HSPD1
CYCS
SNX1
CIAO2A
DEAF1
ZNF148
PRAM1
CCDC38
AMDHD1
ZCCHC3
SNX3
MTRF1L
SLC25A25
PRR14
YARS1
S100PBP
PACSIN2
TMC8
LRRC59
CCDC107
DNAJB1
ATP5MPL
TMPPE
GLB1
FAM72A
ELOVL6
RFX8
HNRNPUL1
ERBB2
TOMM40
AK2
RMDN3
CAT
SERPINB9
ZNF740
SHC1
CSAD
CKS1B
TCERG1
TMEM59L
CRLF1
PITPNM1
ARIH2
MAPKAPK3
KPNB1
FMC1-LUC7L2
FMC1
PEX14
DFFA
GRWD1
PLEKHO2
LRRN4
TMC7
PGP
LDLR
BRICD5
MLLT6
CMTR1
C8orf37
TMEM14A
DCP1A
STAT3
KHSRP
NAT8
BCAR3
WBP1L
BAZ1B
FAM227B