ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236748 | IMR-32
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◣ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FAM187A
EFTUD2
CCDC103
NUP85
RWDD1
MRPS7
GGA3
GOSR2
HADHB
HADHA
TAOK3
SUDS3
ZNF335
PSMD12
NVL
BLCAP
RABL2A
TSN
RABL2B
RPS12
SLC35B1
MAPKAPK5
CACTIN
TSNAX
POLR2E
HSPA9
NME6
C19orf48
VDAC2
PNO1
POLR3F
DZANK1
RABGGTB
SEC61B
ALG2
COX7A2L
RBBP5
VTI1B
PSMD1
SART3
ISCU
NUP205
ZRANB2
PAK1IP1
C6orf52
FARSB
FAM104A
C17orf80
RPS27A
CLHC1
STAM
REXO1
EXOSC5
BCKDHA
USP1
NFKBIL1
DDX39B
ATP6V1G2
SELENOF
HS2ST1
LYRM4
FARS2
NCLN
PSMG2
CEP76
XPNPEP3
ST13
DNAJB7
PI4KB
PES1
DCTN1
CAPRIN1
UFM1
TTC8
GOLGA5
UPF2
COMMD1
CCT4
RPL21
SUPV3L1
NDUFA4
APOM
BAG6
IQCG
RPL35A
ZNF576
IRGQ
OAZ3
MRPL9
TMED1
SMC2
VARS1
ATP5MG
DYNC1LI2
SUCLG1
PCBP1
RPS23
ATP6AP1L
STAM2
ANAPC7
TBCK
AIMP1
EIF4ENIF1
PROSER1
NHLRC3
MRPS5
SKP1
C16orf91
RPS29
LRR1
SRD5A1
ADK
AP3M1
ICE1
ACTR10
DPH6
CDC73
GORAB
OSGEP
APEX1
IPO13
PDAP1
BUD31
STK36
RNF25
TM9SF1
RPS10-NUDT3
RPS10
CCDC43
TMEM101
PIN4
OR6B2
NDUFA10
TAF9
RAD17
AK6
RPN1
CD24
PAF1
GADD45GIP1
MLEC
HSPA1B
PTGES2
BABAM2
RBKS
SF3B3
COG4
DUSP12
ARHGAP11A-SCG5
ARHGAP11A
AXDND1
GTF3C4
DDX31
ZNF383
MRTO4
EMC1
SEC11C
EIF2S3
MRPL38
PCGF1
LBX2
SPCS1
GLT8D1
SMLR1
KLHDC8A
RPL7
RDH10
BICRA
CNPY2
MYCN
TCHP
OPRM1
ADAMTS8
MTRNR2L8
PCNX1
CRYBG3
UBE2I
RPS24
POLR3A
BAHCC1
XKR7
SLC22A23
WRAP53
TP53
QPRT
RBM25
CHD8
NRP1
CCDC68
DDX1
PLEKHA6
NRXN1
SRSF11
LRRC40
MFAP4
HSPE1-MOB4
HSPE1
HSPD1
APBA1
SYBU
NFATC4
ACVR1
XXYLT1
GPR88
GMEB2
SNX1
CIAO2A
HSD17B1
SNRPD2
QPCTL
ST6GALNAC3
TSPAN11
JDP2
DPYSL5
FAM162A
CCDC58
MYOG
LIMA1
MAMDC2
CHN2
CPVL
EIF4H
ALKBH5
ZCWPW1
MEPCE
KCNN3
INKA2
GRK5
NTN3
NELFA
OCA2
CAPRIN2
DYNLT1
ARSG
IGFBPL1
GBA
CXCR4
OMD
CS
BCAT2
TLX2
PKN2
SECTM1
DVL3
MAD2L1BP
TOMM20
SPZ1
ANO3
TMC6
TMC8
SLC35A3
CDON
KLF7
MEGF6
R3HCC1
LRRC43
CD9
MYLIP
NRM
PPP1R18
VPS50
HEPACAM2
DLC1
HNRNPA2B1
CBX3
RAB26
ARID3B
ANKLE2
NFE2L1
TCP1
MRPL18
HUS1
CNBD2
CBFA2T2
RFX8
PCGF3
ELAPOR1
C1orf194
SAMD10
PRPF6
TOB1
ACOT11
NPR2
PDHX
APIP
CHN1
CYTH3
TBX2
RARA
TSHR
RAB27B
CCDC33
ZBTB18
UROD
HECTD3
CHRNA3
IDUA
PRRT2
MVP
PAGR1
CILP
TIAM2
RUNDC3A
AKNAD1
IL6ST
AFF3
BRD4
MTRNR2L1
MAN2C1
MLF2
CD74
GOLGA8R
PRPF3
TIAF1
CDO1
RXYLT1
TXNDC11
ABCA4
GFRA2
CLTC
VMP1
PTRH2
TNFRSF19
ANK3
TPCN1
ACVR1C
CRTC2
RHBDF2
IFI16
SLC26A11
SGSH
USP9X
CDC42EP2
PRDM10
SNN
ASXL2
KRTAP3-3
PSMD6
MRPL12
SERTAD3
MTF2
UFSP2
C4orf47
COMT
TXNRD2
NHLH2
SMARCD2
LGSN
CERK
BMF
KTI12
SYTL3
CDAN1
PTPN6
C12orf57
UNC5A
MYL4
FRG2C
DUX4
FAM222B
SMAD5
CYP27C1
RPS7
FARSA
CALR
F7
SORBS2
TUBB
MDC1
CIPC
C1orf185
NES
KIAA0319
NEDD4L
RPL27
RP1L1
DIS3L2
DNAL4
LEMD2
PLAC8L1
SECISBP2L
ZNF397
UHRF1BP1
ID2
SF3B2
GAL3ST3
PAXBP1
PELI2
MGARP
SH2B1
DDX23
NCOR2
AIG1
SPATA4
FRMD4A
ZBTB26
B3GNT3
SMAD9
UBALD1
GOLGA8O
ARRDC4
FRZB
MRTFA
BRWD1
GGA1
FRMD6
ZNF785
COL23A1
SLC47A1
RIMS3
EFNB1
HMCN2
RARB
GRIP1
CCDC167
ARIH1
UBR5
CRMP1
PHOX2B
TLN1
CREB3
NCR2
SNAPC1
RTBDN
CMTR1
THSD7A
RBMS3
MAST1
ADCYAP1R1
MBD6
DDIT3
SH3D19
LDB3
PGM5
TRDMT1
DGKZ
TNFAIP2
P3H2
GSTP1
SULF2
SATB1
RNF144A
FYN
STAT3
SPOP
RPAIN
NUP88
LOXL1
PLA2G12B
HCFC2
GLT8D2
PRKCSH
CCDC151
BIRC6
AMZ2
ADNP
DNAJC22
LYSMD2
PTGES3L-AARSD1
PTGES3L
RUNDC1
CHD7
DCT
ZCCHC4
SLC12A5
CDH7
CRABP1
SYNPO
SRP9
GCHFR
C15orf62
SHMT2
EYS
GIT1
ANKRD13B
ARID2
BAZ2A
TANC1
PANK2
PXYLP1
RGS3
FKBP5
ARHGEF1
ARL14EP
C11orf96
RMDN3
SPATA25
NEURL2
CTSA
MTMR14
CENPBD1
TIMM10
NUMBL
ELF1
WBP4
MEIS3
SLA
SKIL
CBX5
CLASP2
PAN2
IL23A
HMGB1
USPL1
CEP120
UQCRC2
LZTS2
RPS26
NCAM1
DPF1
NRG1
RNF32
SMYD1
RPS27
RAB13
BRINP3
PDE12
ABHD2
UGP2
CRIP1
FBXO46
NOCT
SNRPE
MEIOSIN
B3GNT2
RCOR1
TMEM107
CDC42EP3
PHLPP1
TRIOBP
ZNF76
MSRB2
NET1
TM6SF2
BAZ2B
DDR1
KDM3A
KCNK2
UBAP2
SSNA1
ANAPC2
PDGFRA
PTPN13
CDK6
FAM83E
SPHK2
RPL18
TMEM244
DISP2
PHGR1
ATG101
PRPSAP1
CAPN10
CNNM2
METTL24
POLDIP3
ANKDD1B
TLE4
FBXO22
PCBD2
CCDC174
TRIP4
ZNF438
IGFBP6
SOAT2
RPL26
IL18BP
ARHGEF25
AHCYL2
PRCD
INAFM2
FRG2
ARHGDIB
HMGA1
S1PR4
RFTN1
SMG7
MCL1
MEMO1
CENPM
LIG3
ZNF503
NEUROG2
ZGPAT
ARFRP1
PDE6B
NEUROG3
HES1
MTRNR2L2
MSH3
DHFR
HES3
HOXA4
CDX2
SPATC1L
CYP26A1
VEZT
FGD6
FZD8
NFE2
HOXA3
PMAIP1
IER3
FLOT1
SP2
ARHGAP10
NDUFS7
DHRS3
ZP4
NEUROG1
CCDC200
ATOH1
NEUROD1
KAT6B
DPP9
BNIP3
ERCC1
TLE3
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
H2AW
TTI2
WDR74
HOXA2
ST18
HOXA1
TBX3
LIN28A
ASB2
ZNF746
INSM1
DUSP6
CDCA7L
TEPSIN
NDUFAF8
ERRFI1
DNM2
FGF19
TPRA1
FOXP1
HOXB3
P4HB
RUNX1T1
FBXO31
NPAS4
MINDY2
HPD
PRUNE2
ANKRD28
DLL4
SP5
TMEM70
ELOC
PDE4D
PDHB
SMAD3
CCNDBP1
MRPL34
DAPL1
CLGN
LPIN1
ARHGEF28
CAMTA1
RAB5B
ID3
KANSL3
FER1L5
TMEM120B
KIF21B
STX18
DCTN3
DLX4
TLE1
ZFHX3
RXRB
PHC2
DONSON
DOLPP1
ARID3C
ANK2
HOXC4
PGK1
SLC39A7
ATF6
RBPJ
MSX1
OTUD7B
SIRT4
CCN1
MFSD10
UPF3A
PRRX1
KDM6B
KATNB1
SMPDL3A
SQSTM1
LZTS1
TRIB1
BAIAP2
PDZRN3
FRA10AC1
PPP6R3
ABCC10
RARG
NINJ2
ZNF687
BCL3
POP5
RFX1
CLCN3
MYLK4
NR2F1
MTMR4
GATA4
GPCPD1
ID1
USP17L20
ZFHX4
NRL
ZNF367
PCGF2
NBPF1
KCNAB2
TOP2A
KDM2B
CCNL2
PSPN
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
NUBP1
SACM1L
ADAP1
USP17L22
ITGAV
FOXP2
FURIN
NFKBIA
MIDEAS
TLE2
IQSEC3
NR2F6
RNF103-CHMP3
RMND5A
DCAF11
HEXIM2
CNTN1
RASSF5
SP1
PKDCC
PCNA
ZFAND2A
ZNF608
OSBP
NLK
PPCDC
ABHD8
STIP1
EIF2AK3
KAZALD1
RNF207
DLG2
CSF3R
RHBDD1
HMGCS1
SOD2
AHDC1
LRATD2
MDM2
ATP5F1B
GADD45G
SLC45A4
RAB11B
KNL1
RBBP7
AGO1
G3BP1
LPCAT3
KMT5A
NCOA2
EVI5L
CITED2
KDM8
DSCAML1
RTN4
TRAF7
MACROH2A1
FTL
JUP
DDA1
HNRNPD
MALRD1
GPC6
SREBF1
POLG
FAM107B
SMIM20
MEIS2
SLC7A5
CRLS1
GRSF1
SOCS3
B4GAT1
TRIM46
EVA1A
MYRIP
SHF
MIDN
METTL11B
RGS12
RBFOX2
PLEKHG2
SPG7
ARHGAP24
SEPTIN9
CCL26
GLRX5
ANTKMT
SSBP4
FST
DAGLB
SLC6A12
LCK
FAM167B
GADD45A
TMEM94
SEC22B
ARAP1
INAVA
ZFP36
BFSP1
NCDN
KIAA0319L
PRMT5
NEK3
EIF3D
ATP6V1E2
SLC30A4
STAP2
ACYP1
MYEOV
HPCAL1
SH3YL1
ACP1
H3C12
H2BC17
H2AC17
DIABLO
FGR
ADM
MRPS28
PLEC
CYP51A1
RAB37
COX5A
STX1A
SERPINB1
SERPINE1
SNCG
MMRN2
HOXC6
LRCH4
FBXO24
RHOQ
CACNA1D
TCF7L2
ANKMY1
CEP41
CIC
FRMD3
ARHGAP4
HNMT
ARID5A
CAPNS2
CNKSR3
KMT2A
NKD1
CPT1A
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ROGDI
DNAJB3
LTBR
BRMS1
MRPS24
SYNJ2
LAPTM5
ARHGEF10L
HOXC5
TES
PHETA1
RNF166
KCTD7
EFEMP2
LNPEP
RAC1
CDS2
INSM2
HOXB1
CSRNP1
MBD2
CMSS1
USP42
ARID4A
ANKRD1
DUSP9
ILF2
LFNG
PNKD
ARL8A
ZNF414
PLAGL1
TDRKH
TUBB4B
TXNRD1
HTR5A
AIFM2
EVPL
SEC14L1
HIBADH
DMBX1
IKBKB
WTAP
LMNA
LUC7L2
LRP5L
GTF3A
PRKACA
UBE2F
LAMP1
NRSN2
NR2C1
MSX2
KLHDC2
MT2A
IL6R
HOXB4
BHLHE40
RAI14
COMTD1
TCTEX1D4
BTBD19
IQGAP2
CFL1
C12orf73
TIGD1
EIF4E2
CPSF4L
TUBGCP3
VOPP1
RBM15
SH2D6
UACA
ZNF77
CCDC88A
RNF34
CCDC88B
RNF149
NRCAM
NEDD9
CR1L
RNPEPL1
TRABD2B
LRIG1
EPM2A
SH3BP2
IRF9
PIKFYVE
PIGV
ZNF3
H6PD
ING1
GOT1
TBL1X
PAX6
TMEM60
PHTF2
RASSF2
ZDHHC4
MYADM
EIF1B
CCL16
KRI1
CDKN2D
E4F1
ANKS4B