ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◣ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
TAOK3
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
ZNF503
TBCK
AIMP1
RWDD1
HADHB
HADHA
RPL21
NCLN
VTI1B
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
FRG2C
ID2
SLC35B1
NUP205
POLR2E
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
GGA3
HOXA2
REXO1
STAM2
DCTN1
VDAC2
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
BLCAP
RPS23
ATP6AP1L
IGFBP6
SOAT2
DPH6
VARS1
DAPL1
PES1
NDUFA4
SEC61B
ALG2
ZNF576
IRGQ
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
PDE6B
TMED1
MRPS5
PNO1
TM9SF1
COX7A2L
PKDCC
BABAM2
RBKS
EIF4ENIF1
ANAPC7
USP1
IQCG
RPL35A
RBBP5
RARB
LYPD1
CAPRIN1
PI4KB
SART3
ISCU
ICE1
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
FAM104A
C17orf80
PROSER1
NHLRC3
XPNPEP3
ST13
DNAJB7
ACTR10
FRG2
PDE12
RBPJ
CDC42EP3
SYBU
ZFHX3
OSGEP
APEX1
LTBR
SCNN1A
DUX4
NEO1
RPS12
SLC22A2
LRRN4
PTGES2
APOM
BAG6
UFM1
CBX4
C12orf29
PTK2B
CLGN
ZNF608
PCBP1
CCNDBP1
NR2F1
CREB5
NSUN6
ARL5B
PAF1
CYP26A1
VANGL2
CITED2
SF3B3
COG4
DIAPH3
RBMS3
GABRB2
LAMA3
FOXP2
EIF2S3
ST18
TLE2
KCNIP4
METTL24
PXDNL
HEXIM2
ZGPAT
ARFRP1
MRTO4
EMC1
HBB
GADD45GIP1
PIN4
MBD2
ARHGEF38
ZNF407
SIRT4
NFKBIL1
DDX39B
ATP6V1G2
SUCLG1
GATA4
SLC30A4
OR6B2
NDUFA10
MSX2
BARHL2
TTI2
TPM1
PDK1
MYRIP
CXXC4
POP5
HOXA3
CCDC200
CABIN1
ARHGAP11A-SCG5
ARHGAP11A
BANP
HMX2
LAMB1
TMEM106B
SEMA3E
SHOX2
RSRC1
HEY2
SCMH1
CNR1
HMGCS2
TMEM107
TBX2
KAT6B
BNIP3
MET
USP44
RARA
ARHGEF10L
RPS29
LRR1
CDS1
OAZ3
MRPL9
MKRN2OS
MKRN2
HES1
PRUNE2
PDHX
APIP
CACYBP
STK36
RNF25
SMAGP
ZNF746
SEC11C
SPAG17
KDM3A
ST7
ZFHX4
RPN1
SHMT2
RPL7
RDH10
FOXP1
EIF3D
LIN28A
CDC73
DMBX1
TYRO3
HOXA4
TBC1D9
CNPY2
SYNJ2
CCDC59
TMC7
ZBTB25
ZBTB1
GFRA1
ZNF383
TXNRD1
TMEM70
ELOC
SCML4
SPRY1
TAF9
RAD17
AK6
NDUFS7
CLNK
CCDC174
FMN1
RPS24
POLR3A
ACOT2
OSGIN2
TNK2
TRIP10
GPR108
FREM2
SLC25A53
SPIN1
DAOA
PCBD2
REC8
ZNF367
GTF3C4
DDX31
LARGE1
ABLIM3
TSHZ1
NDUFB3
FAM126B
TCF7
HOXA1
FRRS1
RABGAP1L
ABI2
AGO1
USP17L20
USP17L22
RPS10-NUDT3
RPS10
SLC25A6
CCN1
LYPD6B
EPM2A
IL20
USP17L21
USP17L12
USP17L11
USP17L18
PCDH15
CCDC33
GTDC1
GORAB
LYN
TBX3
CFAP69
SNCG
MMRN2
KRT18
MTRNR2L1
ZNF827
PDZRN3
TCF4
MGP
SKIL
OTUD7B
ESRRG
ANTKMT
METRN
TNFRSF19
ANK3
ITGAV
KDM2B
MYZAP
GCOM1
PKIG
RUNX1T1
ALKBH5
MGST1
ABCB4
KRTAP23-1
ARSF
CPE
SLITRK6
GOLIM4
ATOH1
HOXB1
FGD3
CBWD5
CBWD3
RGS8
ZNF507
STX19
EMX2
RARG
ZNF395
GEMIN2
CS
RBM20
GPSM3
SCAMP2
PBX2
EOMES
TMPRSS11F
TMEM9
RPEL1
ETFBKMT
ATXN2
EYA1
SYNJ2BP-COX16
SYNJ2BP
YTHDF2
MECOM
CSNK1A1
C6orf163
C1orf105
IPMK
CISD1
DCTN3
ARID3C
CLCN3
BCAT2
IGF2BP3
POU2F1
BEND7
IL17B
SPCS1
GLT8D1
SERTAD2
ACKR3
NDST3
GGA1
LRRTM4
NLGN1
USP34
SLC19A3
ASXL3
GBX1
ARAP2
SIGLEC15
MRPL34
HOXC4
ID1
ABHD8
HOXC6
NXPH4
PDCL3
PRR13
C16orf91
TACC1
SNX1
CIAO2A
VPS33B
ERP27
KDM6B
MEOX1
COL23A1
IFI16
UBE2I
DMAC1
NEFH
HAPLN1
PRKD1
CEP70
INKA2
DIO2
RASSF6
USP17L15
SMIM32
ELOVL6
LIX1
HUS1
PEX14
DFFA
ITGB8
IMMP1L
ELP4
SLC6A4
BFSP1
ADM
RPP25
THRA
LOC389199
AFAP1
KAT6A
USP17L19
TMSB4Y
DUSP9
CBWD6
ATXN1L
DENR
SLC35F2
SALL3
DONSON
KCNN2
DHRS3
PDE4D
PXYLP1
TIGD1
EIF4E2
SRSF11
LRRC40
HNRNPA2B1
CBX3
SEMA6D
SEPTIN2
HDLBP
B3GNT5
LOC102723360
NCBP3
JAKMIP1
MYLK3
UXS1
PDHB
MEIS2
GADD45A
NTAN1
CNTN4
C2CD5
ID3
LMO4
TRIP4
UBL4B
CRABP2
TLE4
TLE3
LBR
HSPA4L
GJA10
TSPAN3
H2BC5
H1-4
MCU
SOX5
MEGF6
SELENOS
HSPA1B
RCOR3
RAI14
SPATC1L
NEUROG1
RIMS1
LMO1
SH2B1
SEH1L
CTF1
BCL7C
RNF207
SAR1B
MGST2
SLC22A5
KANK1
ANXA11
ACOT1
EBAG9
TMPPE
GLB1
DLAT
PKN2
HNRNPD
SORBS2
CALM2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NR2C1
SHB
ZBED9
CHRNA9
CABCOCO1
SLC7A7
LYPD6
SUSD4
ERICH5
MFSD4A
AP3D1
MSS51
PRDM10
POGLUT3
COLEC12
TPRA1
AKIRIN1
GPRC5A
HIP1
OTOL1
ADAMTSL4
CLDN9
TNFRSF12A
CLDN6
LHFPL2
PRKAG2
MELTF
GPC3
KLRC3
AKAP9
GRHL2
PYDC5
PRTG
DIP2C
KMT2A
FAAP24
CEP89
SOX6
PHIP
APLN
STK38
OTUD4
YAP1
OR51T1
SPATA25
NEURL2
CTSA
BCAP29
TRIM55
TCHP
SSBP2
JMJD1C
DERA
HPDL
PCLO
SULF1
STOM
CRHR2
SMARCD2
LPCAT3
HECTD4
SLC35E2A
SLAMF8
TAF1A
BNC2
ELAPOR2
SOX14
FDFT1
ARL6IP5
UBA3
TMTC3
CEP290
TMPRSS12
KANSL3
FER1L5
MACROH2A1
CALCRL
SFRP2
COX5A
POLR2J3
CHN2
CPVL
SLC48A1
ACY3
PRIM1
GPR37
PANK2
RCOR1
C9orf92
ZSCAN30
CMTR1
HOXB13
NR2C2
RNF111
ETV1
TFAP2B
NANOGP8
MEIS1
NSUN7
DYNLT1
REL
HGH1
LY6G5C
EID2
RYR2
DLG2
ACYP1
ZC2HC1C
SSRP1
P2RX3
TRIM16L
RNASE9
URGCP
URGCP-MRPS24
ZKSCAN2
CCDC102A
MINDY2
WDR26
ZBTB7C
PRXL2A
ARSB
SECISBP2L
AP1B1
MACF1
RILPL1
EML5
STATH
GCG
JCAD
FMO1
QPRT
PEX2
EIF4H
NAGLU
TRIM24
FNDC5
CRYAA2
CRYAA
ZDHHC17
RBP2
IQSEC2
BRWD1
ZBTB17
POFUT2
GIGYF1
MPDZ
KCNS3
NFE2
MYADM
UFSP1
ACHE
PARP9
DTX3L
FGD5
NEUROG2
UBE2V2
UQCC2
CLK1
BNIP2
GAB2
SALL4
NCOA7
ADGRL2
TUBB
EHF
MDC1
SFXN3
PDZD7
SKAP2
IQCB1
EAF2
MYO6
ING1
ATXN7
ZNF385B
GBP1
CDK6
DNAJA2
PPARGC1A
PNN
TRAPPC6B
CD74
POF1B
PRKRA
PJVK
GTF2H5
PALLD
MTF2
DZIP3
CIP2A
SRSF10
CADPS
CABLES1
BZW2
DSC2
ACBD6
CSDC2
PKD2L2
RGS2
TLN1
CREB3
PLIN2
SH3PXD2A
BAZ2B
GTF2IRD2B
MIGA1
CTNNA1
VEPH1
PCTP
ZNF341
CD55
NNMT
SLC5A10
MRPS28
CMSS1
FILIP1L
SPAG8
HINT2
CMTR2
ROR2
FSIP1
SLC7A2
SDR39U1
PLEKHD1
IDH1
RBM7
C11orf71
SLC12A3
ZASP
SAP25
CEP295
UBB
EXPH5
ADAMTS3
CNOT10
NUP93
RAD18
GJA1
MRPS31
SCOC
KCNK2
DNMBP
TBC1D32
ZNF629
NAT1
NOX3
SOD2
WTAP
CATSPERG
DNAJB5
PCNX4
TK2
CKLF-CMTM1
CKLF
SKIV2L
NELFE
CLTC
BTG1
DNAH12
NANP
FLVCR1
TMEM205
CCDC159
CENPS-CORT
CENPS
RPL5
IMMP2L
GATA3
CAMK2G
LSM6
ZNF3
PTGES3
CENPBD1
IFT22
ACP4
TANC2
NDNF
LOC105372440
GRAMD2B
CSF3R
SLC6A12
NELFA
EFEMP2
SPTBN1
SRI
BAG2
ARL14EP
PHACTR2
BAG3
FZD8
RXRB
LSMEM1
NAA40
COL11A2
NIPSNAP2
SPRY3
TLX3
THUMPD3
PPP1R3D
FAM217B
SEMA4B
CBWD2
RHOBTB1
TNPO3
PDE4DIP
ELOA
P3H2
FAM110A
HAND1
NTNG2
CTH
REM2
GPC6
JAK1
FABP5
UNC93A
H3-3A
NRDE2
ROBO3
TBC1D8B
CFAP20
CRADD
MPPED2
CDKL2
MCF2
TPCN1
HEBP2
WDR81
CDK14
ILF3
BATF2
ASAH1
RND3
LOC100287896
LIPT2
TRIP12
FBXO36
TEX14
TRPM7
LRP6
MDM2
C6orf62
B4GALT3
ZSCAN25
PXMP2
POLE
MYBPC3
CHD7
SASH1
HELT
RPS3A
PKP2
NXPH2
SLC30A9
ABCA4
TRAP1
NADSYN1
DHCR7
PHETA2
NAGA
SMDT1
TAS2R8
TAS2R7
TM9SF3
PGK1
ANKRD1
DPEP3
SERPINB6
MTCH2
IRS2
CDKN2AIP
IRX5
CRNDE
EDNRB
NR2F6
CYP51A1
TSPAN4
POLR2L
GRWD1
SLX1B
SLX1A
BOLA2B
BOLA2
RAN
SULT1A4
SULT1A3
NPNT
MICU2
CREG1
KIAA2012
OR6X1
MARK1
SMIM20
DMD
CHD8
ARHGEF12
SPPL2A
NEK2
INTS10
MANEA
BCAT1
USP12
FSTL5
ARID3B
CEP41
TBC1D8
CCN2
SUPT3H
MMAA
EEF1E1
CCDC169-SOHLH2
CCDC169
SS18L1
PSMA7
ZNF391
ATP9A
KRTAP19-1
SERPINF1
RTRAF
OR5A2
COA1
FAM83F
CFAP46
CAMLG
RTL10
GNB1L
APPL2
ZNF878
DERL2
STON2
LPIN1
ZFAND6
ANAPC15
TBC1D1
PRSS22
ATF6
SLC11A2
OPA1
C15orf61
TSACC
CCT3
TTK
KIF5B
MED27
LYRM9
ELMOD1
CNOT2
LNPEP
NFIB
BAMBI
KRTAP3-1
LSM8
SHOC2
BBIP1
DCLK1
IGFBP2
POLR2D
ZSWIM7
TTC19
TBC1D5
CRPPA
ELF3
AGAP11
ADIRF
DTNB
LIMA1
HSPE1-MOB4