ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671297 | NAMEC8
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◣ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

MTRNR2L1
LAMA5
ZGPAT
ARFRP1
TGM2
IER3
FLOT1
DUX4
WDR74
IGFBP6
SOAT2
MTRNR2L2
MSH3
DHFR
BIN1
ABCC10
KNL1
TMEM107
SHF
MYEOV
ERCC1
TTI2
POLDIP3
LTBP3
MIDEAS
ITGB2
ITGA5
PDE12
PLEKHA7
TRIB1
GSTA4
HIF3A
TRIM7
BORCS6
POLG
FRG2C
GPR39
POLR3E
CCDC107
SPATA25
NEURL2
CTSA
USP2
PRMT5
PIKFYVE
DPP9
STX16
VGLL4
UPP1
LTBR
SCNN1A
SMAD3
ACYP1
ZC2HC1C
GDF5
PPP6R3
TSPAN4
POLR2L
DUSP1
TCTEX1D4
BTBD19
CCDC200
MEAK7
RGS3
HES7
ALOXE3
C8orf37
NDUFS7
RXRA
RAB11A
PLXDC1
H4C8
PSMA3
RPS29
SH2B1
LTA4H
CLCF1
ZNF367
PRR7
FHL2
SACM1L
LUC7L2
FMC1-LUC7L2
FMC1
CD14
SIRT4
KLRC3
CCND3
TAF8
STX1A
NFKBIA
JUNB
CCDC88B
WNT9A
MTRNR2L8
PHC2
SH3BP4
B4GAT1
BRMS1
HMGN4
IL6ST
ACSL1
VASN
H4C3
H1-6
CCL20
C11orf86
IL34
TINAGL1
GPRC5A
ANK1
RNF208
CYSRT1
RNF224
BCAR1
FRG2
H4C12
DDIT4
LAPTM5
PKM
MXD4
TRIM55
RNASE4
ANG
HSPA6
MUC5AC
NIBAN2
SMIM3
PSCA
MFSD10
NUF2
APOL6
KLF9
PARP2
UBC
YJU2
LY6K
MICALCL
SCAND1
AMOTL2
ILF2
EPM2A
MED16
FBXO46
PTPN6
C12orf57
ASB2
CD63
N4BP2
RALGDS
RARA
IGF2BP3
PHLDB2
ENAH
ZBED9
SLC41A3
SYS1
ABHD2
PCGF2
NCOA7
PC
CCN5
DLC1
ELOVL6
NRP1
TCF7
NAA38
CHD3
TAF9
RAD17
AK6
AJUBA
SNX8
SEPTIN9
PER1
STX10
IER2
ITGA3
SMIM29
TTC39C
METRNL
H4C11
H3C15
H3C14
H2AC19
H2AC18
MAP1LC3B2
FOSL1
NADK
NEDD4L
METTL26
TMEM40
TAGLN2
GIP
C3
GFOD1
DTNB
S100A2
DUSP10
IL20RB
GNAL
NDST1
GALE
CETP
SQSTM1
ANXA11
C1QTNF1
GPX4
SPAAR
HRCT1
RARG
CDC42EP1
ARHGAP22
RGS2
JPH2
NQO1
KCNMA1
TANK
SLC22A18
ANKRD2
FKBP5
H4C15
H4C14
ARMC12
ZFAND3
GOLGA1
C19orf33
ARIH2
EIF4A3
FITM2
TNFRSF6B
SREBF1
SREBF2
H2BC8
H2AC8
OR2T1
BNC1
RIN1
TES
TMEM184A
NIPAL4
MAP3K14
CNN2
TMEM259
PLAU
HM13
CDK5RAP1
RRN3
ATP13A2
TENT5B
KANK4
FBXO31
ARL6IP1
FLYWCH1
MT2A
PEAR1
SLC45A4
LTBP1
EXOSC6
H4C4
UBE2H
NT5DC3
SBNO2
CDK13
CPA4
PNPLA3
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
POLR2E
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
TTC8
GOLGA5
SUPV3L1
IQCG
DPH6
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
PAF1
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
LRR1
PDE6B
NEUROG3
PTGES2
RARB
HES1
PIN4
OR6B2
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES3
ARHGAP11A-SCG5
ARHGAP11A
STK36
RNF25
MRTO4
EMC1
SKIL
HOXA4
CDX2
SPATC1L
CYP26A1
VEZT
FGD6
ARID3B
FZD8
SEC11C
EIF2S3
GADD45GIP1
RPL7
RDH10
BICRA
NFE2
SYBU
HOXA3
CDC73
PMAIP1
ID2
SP2
ARHGAP10
C16orf91
RPN1
GTF3C4
DDX31
DHRS3
ZP4
GORAB
NEUROG1
ATOH1
NEUROD1
CNPY2
KAT6B
BNIP3
TLE3
ZNF383
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
TLE4
DNAJB7
MRPL38
SPCS1
GLT8D1
H2AW
PHOX2B
PDHX
APIP
HOXA2
ST18
HOXA1
TBX3
LIN28A
ZNF746
INSM1
DUSP6
PCGF1
LBX2
CCDC33
CDCA7L
METTL24
TEPSIN
NDUFAF8
ERRFI1
PCBD2
DNM2
FGF19
TPRA1
FOXP1
ANKLE2
COL23A1
HOXB3
ALKBH5
P4HB
RUNX1T1
TBX2
NPAS4
MLEC
MINDY2
HPD
PRUNE2
TNFRSF19
CS
ANKRD28
DLL4
RPS10-NUDT3
RPS10
SP5
TMEM70
ELOC
PDE4D
PDHB
SYNPO
AXDND1
HUS1
CCNDBP1
MRPL34
DAPL1
CLGN
LPIN1
ARHGEF28
CAMTA1
RAB5B
ID3
KANSL3
FER1L5
TMEM120B
KIF21B
STX18
DCTN3
DLX4
TLE1
XKR7
ZFHX3
RXRB
DONSON
DOLPP1
ARID3C
ARRDC4
ANK2
RPS24
POLR3A
HOXC4
PGK1
SLC39A7
HSPA1B
CBFA2T2
ATF6
RBPJ
MSX1
OTUD7B
CCN1
NELFA
UPF3A
PRRX1
KDM6B
KATNB1
PANK2
SMPDL3A
LZTS1
TMEM101
CCDC174
BAIAP2
PDZRN3
FRA10AC1
NINJ2
ZNF687
SMARCD2
BCL3
POP5
RFX1
CLCN3
MYLK4
NR2F1
MTMR4
QPRT
GATA4
GPCPD1
ID1
USP17L20
ZFHX4
NRL
SRSF11
NBPF1
KCNAB2
TOP2A
KDM2B
CCNL2
PSPN
ALKBH7
CNOT2
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
LRRC40
NUBP1
ADAP1
USP17L22
DYNLT1
ITGAV
FOXP2
FURIN
ARSG
TLE2
IQSEC3
NR2F6
RNF103-CHMP3
RMND5A
DCAF11
HEXIM2
CNTN1
RASSF5
PXYLP1
SP1
PKDCC
PCNA
ZFAND2A
ZNF608
OSBP
NLK
PPCDC
ABHD8
STIP1
EIF2AK3
KAZALD1
RNF207
DLG2
CSF3R
RHBDD1
HMGCS1
SOD2
AHDC1
LRATD2
MDM2
ATP5F1B
GADD45G
HNRNPA2B1
CBX3
PSMD6
RAB11B
RBBP7
AGO1
G3BP1
LPCAT3
KMT5A
NCOA2
EVI5L
CITED2
KDM8
DSCAML1
RTN4
TRAF7
MACROH2A1
FTL
JUP
PRDM10
DDA1
HNRNPD
MALRD1
GPC6
FAM107B
SMIM20
MEIS2
SLC7A5
CRLS1
GRSF1
SOCS3
TRIM46
LIG3
EVA1A
MYRIP
MTF2
MBD6
DDIT3
MIDN
METTL11B
RGS12
RBFOX2
PLEKHG2
SPG7
ARHGAP24
TPCN1
CCL26
GLRX5
ANTKMT
PKN2
SSBP4
FST
DAGLB
SLC6A12
LCK
FAM167B
GADD45A
CBX5
TMEM94
BAHCC1
SEC22B
CCDC43
ARAP1
KDM3A
INAVA
ZFP36
BFSP1
NCDN
KIAA0319L
NEK3
EIF3D
ATP6V1E2
TLN1
SLC30A4
CREB3
STAP2
HPCAL1
SH3YL1
ACP1
H3C12
H2BC17
H2AC17
ABCA4
DIABLO
FGR
ADM
ZBTB18
MRPS28
PLEC
CYP51A1
RAB37
COX5A
SERPINB1
SERPINE1
SNCG
MMRN2
HOXC6
LRCH4
FBXO24
RHOQ
CACNA1D
GMEB2
TCF7L2
ARID2
HMGB1
ANKMY1
CEP41
CIC
FRMD3
ARHGAP4
HNMT
ARID5A
CAPNS2
UGP2
CNKSR3
KMT2A
NKD1
CPT1A
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ROGDI
DNAJB3
KIAA0319
MRPS24
TRDMT1
SYNJ2
ARHGEF10L
HOXC5
PHETA1
RNF166
KCTD7
EFEMP2
LNPEP
RAC1
CDS2
INSM2
EIF4H
HOXB1
CSRNP1
MBD2
CMSS1
USP42
INAFM2
ARID4A
ANKRD1
DUSP9
LFNG
PNKD
LIMA1
ARL8A
IFI16
TXNDC11
ZNF414
PLAGL1
TDRKH
TUBB4B
TXNRD1
HTR5A
AIFM2
EVPL
SEC14L1
SYTL3
HIBADH
DMBX1
CERK
IKBKB
WTAP
LMNA
ZNF76
LRP5L
GTF3A
PRKACA
UBE2F
LAMP1
SORBS2
NRSN2
NR2C1
MSX2
KLHDC2
IL6R
NRM
HOXB4
SLC35A3
BHLHE40
RAI14
COMTD1
CXCR4
IQGAP2
CFL1
C12orf73
TIGD1
EIF4E2
CPSF4L
TUBGCP3
CDK6
VOPP1
RBM15
SH2D6
UACA
ZNF77
CCDC88A
RNF34
USPL1
RNF149
NRCAM
NEDD9
GSTP1
CR1L
RNPEPL1
NRXN1
TRABD2B
LRIG1
SH3BP2
IRF9
PIGV
ZNF3
H6PD
ING1
GOT1
TBL1X
PAX6
TMEM60
PHTF2
RASSF2
ZDHHC4
MYADM
EIF1B
CCL16
KRI1
CDKN2D
E4F1
ANKS4B
CBX4
NANP
USP3
KCNH7
CYB5R4
PRDM12
TF
METRN
DCAF7
NKIRAS1
CHD8
KLF6
TRAF4
WDR97
MAF1
SCAP
ZNF595
ORMDL3
CRKL
SEMA5B
OPRM1
TUBB
INHBE
NKX1-1
GPAA1
EXOSC4
YTHDF2
ZNF827
MARCHF3
CXXC5
ATP2B2
RNF144A
CASC3
CLK1
ICAM1
ATG16L1
ERI3
SMIM11B
SMIM11A
CEBPE
CDC42EP3
NFE2L1
NCBP2AS2
NCBP2
ENO1
SRSF2
SLC25A19
MFSD11
KPNA4
UGT1A1
FAAP24
CEP89
IRS1
GSN
PCTP
PARK7
HECTD4
UNC13D
ATP5MC1
TRAF2
PLEKHF2
TACC1
TCHP
L1CAM
ANP32E
CELSR3
MPND
ACVR1
PXMP4
MPC1
TTC30B
GPT2
GGT1
NEO1
CCDC114
HSP90B1
C14orf93
SULF1
ETV4
PAQR8
DUSP12
UBE2C
SRCAP
LOC730183
GPATCH8
DGKZ
RHBG
DDX1
ETFBKMT
CALM2
GBA
BRWD1
RTBDN
DBX1
LMO4
FAM24A
HNRNPC
TMC6
GPR35
RAB17
LASP1
FLAD1
ZCWPW1
TMTC4
SLC25A6
MEPCE
ALDH4A1
ATP23
MPV17L2
CBFA2T3
MAP1LC3B
ABLIM3
UBXN10
SDSL
ADGRL2
SCYL1
POLR2J3
TCF4
ARNTL
LYL1
SHB
CCDC59
KMT2E
STARD4
MVD
FILIP1L
TBC1D8
HSPE1-MOB4
HSPE1
HSPD1
CYCS