ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◣ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NVL
NME6
PSMG2
CEP76
ZNF503
TAOK3
SUDS3
DYNC1LI2
VTI1B
IPO13
NCLN
VDAC2
HSPA9
RWDD1
NUP85
FAM187A
EFTUD2
CCDC103
EXOSC5
BCKDHA
GATA4
IMPG1
REXO1
RPL21
DCTN1
HOXA2
IFI16
SLC35B1
TBCK
AIMP1
POLR2E
NUP205
BBS9
SRD5A1
SEC61B
ALG2
STAM2
MRPS7
GGA3
ARHGEF10L
STAM
NTRK2
C19orf48
TSN
ATP5MG
GOSR2
BLCAP
PES1
UPF2
UBXN10
ACTR10
ZNF576
IRGQ
HADHB
HADHA
VARS1
SUPV3L1
HOXB3
HOXB5
MRPS5
PSMD12
SKP1
TSNAX
GOLGA5
RBBP5
PAK1IP1
C6orf52
PNO1
LYRM4
FARS2
ETFBKMT
FARSB
PCBP1
HAND1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
SART3
ISCU
PI4KB
ERI3
RUNX1T1
SMC2
TMED1
RABGGTB
USP1
COX7A2L
FRG2C
ZRANB2
PROSER1
NHLRC3
CELF4
SF3B3
COG4
ADK
AP3M1
ANAPC7
TBX2
BABAM2
RBKS
ICE1
EIF4ENIF1
TBX3
UFM1
LRRN4
RPS12
LAPTM4B
SELENOF
HS2ST1
TM9SF1
NR2F1
CAPRIN1
XPNPEP3
ST13
MECOM
RPS27A
CLHC1
DMD
MEIS1
DPH6
PAF1
PDAP1
BUD31
IQCG
RPL35A
LIN28A
OSGEP
APEX1
NTAQ1
ELOVL6
CCN1
PLAGL1
SIRT4
SCRG1
TMEM141
APOM
BAG6
CLGN
ADAMTS8
NUBP1
VPS13A
NFKBIL1
DDX39B
ATP6V1G2
PAEP
CXXC4
HOXC4
HOXC6
OR6B2
NDUFA10
DUX4
COMMD1
CCT4
PRXL2A
ERVW-1
KDM2B
OAZ3
MRPL9
HEXIM2
PDE12
NEO1
MGST1
DIAPH3
CITED2
STK36
RNF25
PIN4
TMEM14A
LZTS1
PPP1R21
ZFHX4
SSH1
PDE6B
SUCLG1
HOXA3
KRTAP23-1
MRTFB
DMAC1
PRUNE2
NXPH2
MELK
ZNF608
UNC5C
GOLGA8T
GOLGA8K
ASPG
TMEM120B
SLC19A2
AKAP12
MEOX1
ACKR3
DCTN3
ARID3C
ZAP70
GADD45A
CATSPERG
HIP1
PTGES2
POU2F1
POP5
NIBAN1
LOC102723360
WT1
CD244
KIAA1217
FLVCR1
GBP3
PKDCC
ACVR1
TLE3
CCDC183
CNPY2
SNCG
MMRN2
FEM1B
CYP26A1
SLC48A1
MRTO4
EMC1
PLEKHF1
ARHGAP11A-SCG5
ARHGAP11A
LYPD1
HOXA4
METTL24
P2RX6
C9orf153
FRG2
SEH1L
FAM205A
ZFHX3
SCMH1
RARB
FGF7
HOXB9
GOLGA8N
GOLGA8H
ZNF3
COPS6
ZNF587B
SEC11C
EIF3D
PPFIA2
BNC2
TLE4
SHOX2
RSRC1
EYA1
TMEM14B
CNR1
R3HCC1L
TAF9
RAD17
AK6
EVPL
PACRGL
ZGPAT
ARFRP1
PDK1
PRR13
RPL7
RDH10
CDC42EP3
MXRA7
CFAP221
ZBTB18
GPR19
GTF3C4
DDX31
GPR82
RPS29
LRR1
PGPEP1L
TRPS1
TNP1
HES1
TYRO3
NT5C3A
DMBT1
TMEM9
SLC22A5
SNX16
ERCC1
SERINC3
SCHIP1
RARA
POLDIP3
FOXP2
RPS24
POLR3A
RERG
CPA1
MXD1
LIX1
DSCAML1
ZP3
TEPSIN
NDUFAF8
RNASEH2B
HOXC5
SORBS2
CFLAR
CCNDBP1
SLCO2B1
ABCC9
EMP1
TMEM107
TCF7L2
CREB5
OSBP2
COLEC12
TPM1
FSIP1
JCAD
SPIRE1
PKNOX1
SKIL
ZNF383
PPP1R3D
FAM217B
NDUFV2
TMSB4Y
RAB30
ATP1A1
MYLK3
ZNF367
FBXO34
ACY3
CDC73
SLC9A3R1
SPTBN1
CDH3
CACYBP
ID2
MEIS2
PAM
KDM3A
USP17L20
USP17L22
SOX5
AKAP13
ITGA3
RPN1
CS
SALL4
GABRB2
PEDS1-UBE2V1
PEDS1
MYPN
TTI2
GFRA3
CD96
KCNIP2
FAM72C
SRGAP2B
FAM72D
HOXA5
CYP51A1
VTN
SARM1
TBX4
SIGLEC15
NNMT
CNTN1
SMIM14
CACNA1D
SACM1L
KCTD7
PDZRN3
PDGFRA
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASXL3
ITM2C
CCDC59
HOXA6
PLCH2
PMFBP1
RND3
GDPD5
GC
TXNRD1
GORAB
COPZ1
SVOPL
USP34
CDK15
HNRNPD
REC8
MGST2
CCDC200
IRS2
CDIN1
TLE2
TYRP1
HOXB8
HOXB7
STRA6
FOXP1
CSNK2A3
EIF2S3
HOXA1
POLR2D
TUBB
MDC1
GUCY1A1
COL5A2
VANGL2
PDHX
APIP
SH3RF2
ENTPD4
WDR82
NRP2
CEP70
PLA2G2E
TBX18
RASSF4
METTL7A
SLITRK6
ALKBH5
EFNA5
NPM3
FGF8
GADD45GIP1
CALM2
KCNIP4
C1orf105
PLN
ELAPOR2
ZNF746
SPRY1
CAPN7
EDNRB
IL6ST
IGF2BP3
UBL4B
KRT18
UNKL
CBX5
CRKL
C12orf29
ALG10B
PDE7A
CCN2
WDFY3
IL1RAPL1
SLC25A6
TENM3
NDUFB3
FAM126B
SLC25A30
SLC7A5
PPFIBP2
HSPA1B
ADRB3
FZD8
ID3
RAPGEF2
ST7
DUSP9
HEY2
CPPED1
DNAJB4
HMGCS2
SAMD11
NPHP3
DPP10
ECHDC1
SLC7A7
HAND2
CDX2
SOST
OTUD4
NOL4L
SPRED2
MEGF6
MRPL39
THRA
MRPL38
NFIB
SEMA3E
RNASE9
CD74
BRD3
MPPED2
HOXB6
SPATA25
NEURL2
CTSA
SPRR2F
PCDH15
ESRRG
KANK1
GPC3
NELL2
TNRC18
SMAD7
LOC100129484
SEPTIN9
TCF4
PRR5
PRR5-ARHGAP8
ZNF644
HOXA9
HOXA7
ETV1
DZIP3
CIP2A
MCF2
LDLRAD4
AHNAK
SMAD3
SH3BP4
SFXN3
PDZD7
RCOR1
COL3A1
HAPLN1
TMEM185A
RIPOR2
GTF2H5
LRIG3
IKZF4
PKIA
ABLIM3
SIPA1L1
FBXL4
NR2F2
CSNK1A1
IGFL2
FHL1
INPP4B
PLEK2
DCN
RAPGEF4
SHMT2
PCBD2
TNFRSF19
MPDZ
SRI
UBE2I
RPS10-NUDT3
RPS10
CDH18
HMX2
SPRED1
PHC2
MSX2
GRWD1
NAGLU
GDF11
DUSP6
BNIP2
PFKFB3
ZYX
FAM131B
CCP110
SH2B1
LMOD1
NRG2
H2BC5
H1-4
GFRA1
IL19
KRTAP13-1
FAM83F
NEDD4L
TRIM24
C6orf163
MCM5
CSDC2
LSM6
KLHL2
ARSF
FAM89A
ZSWIM6
DISP1
RBM20
USP17L15
SSBP3
CFAP69
EPN2
STARD13
ATG2A
PGF
BARHL2
IGFBP6
SOAT2
SHLD1
SLBP
PTGIS
KMT2A
ANKRD33B
SMTNL2
ALX1
XKR7
FAM72A
SRGAP2
ANK3
PSPH
CCT6A
BCL11B
MAML3
RAP2C
NKX2-5
CDA
SYBU
GPC6
PKP2
DMBX1
DST
SRRM3
ANKK1
CLCN3
GTF3A
FGB
MT1E
ATP2A1
MYOM2
RANGAP1
RBM25
DLAT
PRRT4
VIM
KRT20
SPIN1
UGT2A3
SCOC
PDCL3
SNX8
PCDH18
DERL3
JADE1
ANKS1B
SLC30A4
LRIG1
USP17L21
USP17L12
USP17L11
USP17L18
ITPRIP
MAB21L2
TAS2R8
CRY1
TAS2R9
TTC24
DNAH12
OVCH2
SYNPO
USP2
TBC1D5
FGD5
WDR26
UGT2B11
DLG2
UBE2H
RARG
YTHDF2
PYDC5
CBFA2T2
OTUD7B
H3C12
H2BC17
H2AC17
ZNF341
SNX10
SYNJ2BP-COX16
SYNJ2BP
SATB2
MID1
SLC18A1
SVEP1
RNF150
LIG3
TBC1D9
HOXB13
SASH1
GNGT1
TTLL6
ELF1
WBP4
OSR1
PPARG
DTWD2
NSD2
PDHB
KDM6B
ID1
TFAP4
ABCG2
PCNX4
ANXA11
TMED7-TICAM2
TMED7
SCARB1
AXDND1
SRGAP2C
FAM72B
VPS33B
KDM7A
ARAP2
ARHGAP28
NDUFS7
ITGAV
ALOX5AP
CCDC175
KAT6B
SERTAD2
GOLIM4
CD248
XPR1
SALL3
IDO2
SPCS1
GLT8D1
AQP1
AGO1
ABCA4
RAB17
EXOSC8
ALG5
EIF4A2
CLUH
NEK7
AGTPBP1
SMYD3
HEATR1
AADAT
PAQR8
GCNT1
EIF3A
C19orf33
CDH2
SKIV2L
NELFE
DRAP1
C11orf68
FGD3
FLRT3
HIBADH
TCHP
MEF2C
RCOR3
IRF2BPL
ZNF280D
SKAP2
SPP1
SMIM20
SCYL1
RGS5
SLC13A4
RNF207
KRT8
TIAM2
GAS1
FANK1
XPO1
BMPR2
CLDN2
NR6A1
LIN28B
ST3GAL6
ACBD6
IKZF3
CPN2
HELT
IL2RG
SEMA3A
CCDC174
ARL6IP5
UBA3
JMJD1C
UTRN
LYRM1
DCUN1D3
CHD8
ATP5MC1
NAV2
SLC22A8
RBP2
PDE6A
CMYA5
ARHGAP24
CNEP1R1
EVA1B
TMSB4X
AJUBA
CLASP2
PDCD4
ZNF407
SERPING1
CASQ1
DACT3
MTF2
PRSS47
PNN
TRAPPC6B
DPF3
ACYP1
ZC2HC1C
SRCAP
LOC730183
CMTR1
AKIRIN1
FRS2
LDB3
ARID5B
CTF1
BCL7C
PIGR
SGK3
RNF125
MAPKAP1
TRANK1
PGK1
ATF6
HNRNPA2B1
CBX3
ADM
ZBTB20
YAP1
ADAMTSL4
BCL9
HOXB2
TMEM132C
CFC1
CSRP1
FTL
MYADM
ZNF391
LRRC17
ANO5
GET4
MAD2L2
DRAXIN
GATA6
TBPL2
KAT6A
CEP85L
E2F6
PRKCE
MZF1
MACF1
ABHD12
AMOTL2
SLC28A3
THUMPD3
MEIS3
LIPC
ALPK2
PHACTR2
KDM4C
ABCB4
GLRX2
JAKMIP2
HUS1
DUSP4
REL
PLAA
IFT74
NCBP3
KCNK6
ISG15
NELFA
FILIP1L
ARHGEF1
LDB1
MFAP4
ACTB
SOHLH2
KIAA2012
COL23A1
POLR2J3
MAP4
ECSIT
QPRT
MYO16
TNNT2
KANSL3
FER1L5
RERE
ZSCAN30
ITGBL1
NBPF9
CNOT2
SULF1
RASSF10
MTRF1L
SPAG8
HINT2
UXS1
SYNJ2
ATAD2
RSC1A1
PDE4D
TMEM95
KCTD11
RBFOX3
PPIP5K2
GIN1
HIP1R
SH3BP5
DYRK1A
KAZN
TMCC3
KCNT2
CCND3
NCOA7
BAG2
CITED4
NBN
TBPL1
SLC26A8
MAPK14
KIAA2026
ZFX
MARCKS
SEC14L5
SGK1
SHB
TRIP12
FBXO36
CHN2
CPVL
EPHA3
SLC39A4
CPSF1
JAK1
ANAPC15
DIP2C
SLC18B1
ARHGDIB
BEND4
ZNRF1
NDFIP2
FABP5
SPPL2A
FSHR
CEP41
HIVEP1
DEDD
NAT1
SH3BGR
LCA5L
ZNF783
MDK
MTRNR2L1
NEUROG2
NEUROG3
MTRNR2L2
MSH3
DHFR
MTRNR2L8
HES3
SPATC1L
VEZT
FGD6
ARID3B
BICRA
NFE2
PMAIP1
IER3
FLOT1
SP2
ARHGAP10
C16orf91
DHRS3
ZP4
NEUROG1
ATOH1
NEUROD1
DPP9
BNIP3
LEFTY2
IGFBP2
LBX1
TRIP10
GPR108
DNAJB7
H2AW
PHOX2B
WDR74