ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671312 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

MTRNR2L1
B4GAT1
BRMS1
WDR74
KNL1
PPP6R3
SACM1L
SHF
BCAR3
DUX4
DPP9
PRMT5
LUC7L2
FMC1-LUC7L2
FMC1
H4C8
GSTA4
FBXO31
TRIM7
C8orf37
BORCS6
FRG2C
TTI2
NDUFS7
CCDC107
POLG
RPS29
POLR3E
COL23A1
HMGN4
RNASE4
ANG
ELF1
WBP4
PSMA3
TIA1
ILF2
METTL26
LTA4H
PCGF2
DDIT4
CASC3
FRG2
NCOA7
RAB11A
OR1F1
ZSCAN22
TMEM107
CNN2
TMEM259
SMARCC2
POLDIP3
TPCN1
PLXDC1
ZBED9
GTPBP6
MTRNR2L2
MSH3
DHFR
IER3
FLOT1
HSPA6
TBL1X
PXK
HES7
ALOXE3
OSGIN1
MAT2A
PPEF1
RS1
MED16
ZNF839
STAT6
ANP32E
LASP1
SIRT4
STX16
YARS1
S100PBP
RPL37
WDR36
CSRNP1
MYC
SAR1B
TRIP4
ZNF827
BZW2
METTL15
KIF18A
ANKMY2
MTF2
ACSL1
OPA1
H4C12
MYNN
ACTRT3
ZC3H10
RPL41
NFE2L2
NOP53
HIF3A
SLC44A1
DHRS3
SELENOH
FRA10AC1
SLC25A45
FRMD8
PARP2
TRDMT1
H4C15
H4C14
GOT2
RAD54L2
ZMPSTE24
DCP1A
MNAT1
BCL3
SREK1IP1
CWC27
NME1-NME2
NME1
HSPE1-MOB4
HSPE1
HSPD1
EIF4G2
FBXO4
FAM227B
DTWD1
NDUFC2-KCTD14
NDUFC2
GBA
JUNB
GTF2H2C_2
GTF2H2
NUF2
TSEN15
DNAH14
TMEM242
CCL20
SF3A3
OR2T1
PHC2
TRIAP1
MRPL40
HIRA
ABT1
PLEKHG2
MKRN3
H4C4
SERPINE1
NDUFA12
PTPN6
ZNFX1
C12orf57
C11orf49
LRRC59
ATF3
SLC38A2
FUS
R3HDM2
INHBC
C19orf53
LY6K
IRX2
C5orf38
NDUFS3
KBTBD4
H3C13
H2BC18
IGFBP6
SOAT2
TMEM248
MTHFD2L
ZSCAN9
TEX46
KDM1A
PSCA
MRPS17
ARID5B
MRPL21
IGHMBP2
SNX17
EIF2B4
CRYAA2
CRYAA
PTPRM
KLF9
GTF2H2C
H3C2
H4C2
CALM2
H4C3
H1-6
EPB41
OR14K1
ZFP36L1
HSP90AB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TPK1
WDR24
ELOVL3
BBS1
NSUN4
GYPC
ARID2
PLK2
ROS1
TOP3B
NUP54
EGFLAM
RBFOX2
GTF2A1
NACA
SRSF2
MFSD11
H1-3
MLEC
INTS12
GSTCD
HPD
PSMD9
MYBPC3
NDUFB10
RPS2
HMGB1
USPL1
KLRC3
CYP20A1
NXF1
GADD45A
MED23
PHLDB2
CEBPB
UTP3
NDUFS4
CDKN1C
C17orf75
UBE2D3
SNAI2
TRIB1
TACO1
RAB30
KLRC2
PSMF1
SLC33A1
NABP1
PLD1
PSMD3
KLF7
ART4
PDE4D
MRPL35
IMMT
LPIN3
DR1
PLIN3
SLC27A4
DUSP1
RPL10A
TMEM238
RPL28
SCNN1G
PTPN21
H2BC5
H1-4
NET1
JUN
SEC11A
HTR5A
TBC1D19
MCTP1
H4C11
CHD1
PCBP3
H4C5
CCDC9B
RPS7
HES4
DRAP1
C11orf68
ZSCAN30
TRMU
CXCL8
MACC1
SRSF7
RBBP5
CLCN3
SPRED2
STK17A
TATDN3
NSL1
MTERF1
PPA2
USP17L20
USP17L22
GMEB2
TRIB3
FAM107B
EIF4A3
ZBTB40
CCNC
MRPS31
LIG3
TUBGCP3
DUSP10
FIBP
CCDC85B
ZNF460
PCMT1
HCAR2
PSMD12
NTSR2
PSMC2
DNAJC2
SAV1
H3C15
H3C14
H2AC19
H2AC18
STK40
NDUFAF1
PCMTD1
UNG
ALKBH2
FOXJ3
CDKN2AIPNL
CCAR2
C8orf58
SNAP47
JMJD4
MRPS18C
HELQ
RTN4
LIMS1
BIRC3
KRT6A
DCAF10
CDC42
CCNL1
SEC31A
MGST1
RSRP1
SUMF2
PRRT3
TOB2
NEDD4L
RXRA
ZNF770
TAMM41
EIF3M
CCN5
IQCG
SNAPC5
LMLN
NDUFAF5
ESF1
ARHGDIA
BLOC1S6
SAMSN1
MAP4
PHACTR4
SLC7A11
C1QTNF1
HIP1R
TBRG4
S100A2
AHCY
POLE4
POC1B-GALNT4
GALNT4
LTBR
SCNN1A
SMIM3
TUBA1C
INSYN2B
MRPL39
POLR3B
PCID2
CUL4A
NFAM1
BTG1
DEF6
KANSL3
FER1L5
HNRNPAB
TRIOBP
H3C10
H2BC13
H2AC13
H2BC14
H2AC14
KRBA2
ASB2
TRAP1
SNX8
H1-2
POLR1H
TMEM158
H3-3B
ITPRIP
DMAP1
NUP107
RPS6
HOXA3
DPY19L4
EIF3B
THOC3
AQR
ERCC1
SOD2
WTAP
SLC30A5
POMK
PSG1
MEIS1
GNAI2
COPS7B
C8orf33
ISL2
PIKFYVE
SETD7
ASH1L
RANBP2
CCT2
SUGCT
MPLKIP
ZKSCAN4
MICALCL
COMMD2
SSNA1
ANAPC2
GABARAPL1
DNAJC11
ATXN2L
FASTKD2
ZBTB20
ASNS
PCNP
MBTPS2
TGOLN2
TEFM
EEF1A1
SLC16A1
DCAF8
C12orf66
ARID3B
WDR97
MAF1
STMN3
RTEL1
ZBTB45
SNX14
ZDHHC3
EXOSC7
ERRFI1
TMEM101
FAM43A
NMRAL1
HMOX2
WDR70
RGPD8
RGPD5
RGPD6
STEAP2
PSG11
SLC35A3
NKIRAS1
SLC24A1
INTS14
TBC1D16
RPL15
AGK
MAPK9
GNL2
PWP1
AARSD1
COQ2
CXCL3
LRRK1
ATP5MC2
SGCA
NCF4
USP30
PFKM
SENP1
PYROXD2
NSA2
GFM2
ADGRG6
MFSD10
KPNB1
LTF
GTF3C5
EPRS1
MET
EXD2
COMMD6
UCHL3
NMNAT1
LZIC
SPRYD4
TTC4
ZNF843
SLC22A15
ZCWPW1
MEPCE
FBXO22
NOCT
B3GALT4
GATD3B
GATD3A
SLC9B1
LSG1
SLC16A7
STMP1
DSTYK
EEF1AKMT2
MUC5AC
CAMK2D
CENPP
MRPL44
TMEM68
TGS1
NOL8
AXL
MRPL22
GEMIN5
SSBP1
PSMB2
GOSR1
MAP4K5
ATL1
FBXW9
LRP12
CLUAP1
C16orf90
TNFRSF1B
WDR11
THOC1
MRPL1
H3C8
H2BC10
MIDEAS
NOL7
SOST
BORCS7
WASHC2A
CPEB2
CDK6
EIF2D
METTL9
ZBTB38
MPHOSPH10
MCEE
ATP1A1
SH2B1
DOHH
H2BC12
H2AC12
TMEM223
TMEM179B
COX16
CELSR1
RUNX1
CALM1
NDUFV1
ERCC6L2
RPL13
SFPQ
PCCB
MRPL20
POLR2C
NPIPB9
RAET1E
TOMM7
ADGRF5
PXDC1
PSG4
CCDC59
CTF1
BCL7C
CIAO2B
CES2
SRSF4
ANXA9
CERS2
RINT1
RPL5
ST7L
CAPZA1
MBP
RCAN1
MAML3
ARL8B
VWA7
CAAP1
MRPS35
EGFR
ENKUR
IARS1
EIF2B5
NUFIP2
TRIM60
CELSR3
FAM162A
CCDC58
ITPKC
COQ8B
CALCB
MANF
CDC25C
SLC39A13
TBL3
FAM53C
RFFL
TOMM5
ZNF622
SQSTM1
CCDC88B
TES
PARL
HINT3
ACTN1
GDF15
SNRPD1
GRPEL1
RTTN
CPED1
TM4SF19
ANXA2
DNAJC9
RPL22L1
METAP1
AHCTF1
ELP3
CTNNB1
HERC3
LAMTOR5
TBC1D22A
PYURF
PIGY
HNRNPA2B1
CBX3
INTS5
C5orf51
CTSC
DEPP1
NANOS3
REXO4
ADAMTS13
PRDX1
ZNF205
PTP4A2
LRRC37A3
ADNP
STX10
IER2
PHB2
HNRNPD
KCTD5
SPOP
MATR3
MT2A
YWHAZ
CCDC125
PLEC
PARK7
WNT9A
C18orf32
RPL17-C18orf32
RPL17
TAF12
RBM18
MRRF
H4C7
H3C7
H2BC9
OR4E2
OR4E1
SNUPN
ERI1
KIAA1958
C9orf147
TMA16
RNF14
NRF1
RRN3
GTF3C6
S100A6
CCDC80
BHLHE40
USP8
PHF23
DVL2
PCDH1
FUT8
R3HCC1
RHOT2
RBM14-RBM4
RBM14
RARS1
BNIP1
CD5
CCDC174
POMP
ELAPOR2
CLCF1
SNF8
KIZ
NANS
F2RL3
SCAF11
TBRG1
DNAJC10
ABI1
PCBP2
NUP214
ROR1
ATXN2
ARID1A
GPC1
RPS27L
IL1RAP
LTBP3
USP53
PKN2
CXXC5
SLC38A1
MFN1
LMTK2
CARNMT1
EGLN1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
POLR2E
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
TTC8
GOLGA5
SUPV3L1
DPH6
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
PAF1
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
ZGPAT
ARFRP1
LRR1
PDE6B
NEUROG3
PTGES2
RARB
HES1
PIN4
OR6B2
NDUFA10
SUCLG1
OAZ3
MRPL9
MTRNR2L8
UBE2I
HES3
PDE12
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
HOXA4
CDX2
SPATC1L
CYP26A1
VEZT
FGD6
FZD8
SEC11C
EIF2S3
GADD45GIP1
RPL7
RDH10
BICRA
NFE2
SYBU
CDC73
RARA
PMAIP1
ID2
SP2
ARHGAP10
C16orf91
RPN1
GTF3C4
DDX31
ZP4
GORAB
NEUROG1
CCDC200
ATOH1
NEUROD1
CNPY2
KAT6B
SPATA25
BNIP3
TLE3
ZNF383
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
NEURL2
CTSA
TLE4
DNAJB7
MRPL38
SPCS1
GLT8D1
H2AW
PHOX2B
PDHX
APIP
HOXA2
ST18
HOXA1
TBX3
LIN28A
ZNF746
INSM1
DUSP6
PCGF1
LBX2
CCDC33
CDCA7L
METTL24
TEPSIN
NDUFAF8
PCBD2
DNM2
FGF19
TPRA1
FOXP1
ANKLE2
HOXB3
ALKBH5
P4HB
RUNX1T1
TBX2
NPAS4
MINDY2
PRUNE2
TNFRSF19
CS
ANKRD28
DLL4
RPS10-NUDT3
RPS10
SP5
TMEM70
ELOC
PDHB
SYNPO
AXDND1
HUS1
SMAD3
CCNDBP1
MRPL34
DAPL1
CLGN
LPIN1
ARHGEF28
CAMTA1
RAB5B
ID3
TMEM120B
KIF21B
STX18
DCTN3
DLX4
TLE1
XKR7