ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662659 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

TEPSIN
NDUFAF8
SPATC1L
SP2
DNM2
P4HB
STAP2
MPND
KATNB1
RAB5B
DOLPP1
ARRDC4
ATP5F1B
ARNTL
RFX1
EIF2AK3
AP3M2
ARID4A
SP1
ZNF687
PGP
BRICD5
PRKACA
CNOT1
HNRNPC
EVI5L
USHBP1
BABAM1
TMEM94
STIP1
MPV17L2
GPR84
CIC
ZNF77
NLK
TOP2A
SKA2
PRR11
GOT1
OSBP
HNRNPL
PROSER3
HSPB6
METTL17
PRR14
TRAF2
CAMTA1
PSPN
ALKBH7
TDRKH
UBE2C
GLRX5
TOM1L2
DRC3
ACTL6A
TRIP10
GPR108
RECQL
GOLT1B
KHSRP
ANKHD1-EIF4EBP3
ANKHD1
NCDN
KIAA0319L
TOMM40
TUBB4B
HNRNPUL1
PITPNM1
CRIP1
TEDC1
PXMP4
FDFT1
HSPA5
LRCH4
FBXO24
MSMO1
PHPT1
MAMDC4
SLX1B
SLX1A
BOLA2B
BOLA2
RFWD3
COPZ1
G3BP1
WBP1
INO80B
FAAP24
CEP89
TCERG1
MTMR4
LRRC45
CENPX
SPAG7
ZSWIM4
SNRPF
BOLA2-SMG1P6
TCF19
CCHCR1
KAT7
KAT6B
PAN2
IL23A
HMGCS1
KDM4B
FAM72A
SRGAP2
H2AZ2
SARNP
ORMDL2
FRYL
DROSHA
C5orf22
COQ8A
MRPL34
DDA1
AK2
MANF
CNOT3
ZFYVE21
XRCC3
KCNAB2
OS9
KPNB1
SHC1
CKS1B
CHCHD6
ABHD2
UBALD2
ILF2
MTMR12
MTFR2
MVD
NRL
DCAF11
RBM27
ZBTB3
JUP
TYK2
SLC25A25
NAIF1
HDGFL2
TMEM60
PHTF2
SLC25A42
HSP90B1
PDK2
PRPF40A
ARL6IP6
STT3A
YIF1A
TMEM151A
CNPY3
TMX2
MED19
PRICKLE3
SPSB3
ISOC2
ZNF691
MYLPF
TBC1D10B
WDR97
MAF1
WDCP
PITX3
GBF1
CENPA
YJU2
DDX39A
PCP2
XAB2
RAB3A
ASF1B
GATAD2A
CNEP1R1
TMEM160
FLAD1
ZDHHC16
EXOSC1
ARMC1
ZNF555
DNAJC14
DERL3
ATP5MC1
GATAD2B
ZNF8
UNK
H3-3B
MSANTD4
CBX5
HNRNPA1
PWWP2A
CFAP43
EIF4A1
PAIP2B
PRRC2B
ZNF574
CENPF
DCAF7
VCP
FAM72C
ABL1
IARS1
MED24
AP2A1
TSKS
ZNF775
RPLP0
ARHGAP19
TESK2
NUDT2
KIF24
MORN4
DDX49
COPE
NUMB
SEL1L
EEF1AKNMT
CGGBP1
ZNF654
LENG1
TICRR
JPT1
PODNL1
DCAF15
PIP4P1
ZBTB5
TBCCD1
DNAJB11
CYTH2
PABPN1
ATG9B
ABCB8
PRADC1
CCT7
ZNF785
PER1
ZSWIM1
KCTD2
ATP5PD
ZBTB32
IMMP1L
ELP4
ZSWIM3
ACOT8
GOLPH3L
FAM204A
OGFOD1
NUDT21
DCUN1D4
SOD2
ACAT2
NGDN
SDF2L1
RAB11B
GOLGB1
CDC23
UBE2T
SIRT2
NFKBIB
DNAJB5
SRGAP2B
FAM72D
FARSA
CALR
RNF5
AGPAT1
HBP1
ALKBH6
LOC101927572
NFE2L1
PHB
ZNF143
BUB3
LAS1L
RAB4B
MIA
CANX
SRGAP2C
FAM72B
PSME2
EMC9
RNF31
TMEM70
ELOC
SLC25A28
FAM126A
DDOST
EXOC4
TOM1
SPTLC2
RRBP1
GSTO2
MTR
PDXP
HGS
ARL16
KCTD7
PSMD4
TNRC6B
PTBP1
RNF181
CCDC61
NFATC2IP
ZSCAN20
KLHDC10
LCMT1
UGP2
ERI3
POGLUT2
BIVM
ANAPC5
C10orf143
SIN3A
NUP107
ECT2
PIN1
USF3
CDKN3
PANK2
TMEM217
TBC1D22B
MNS1
LMCD1
ATP6V0B
DPH2
SAMM50
CALR3
C19orf44
RBM42
TCP1
MRPL18
CEP41
FBXO5
STIL
NEMP1
C7orf57
BTD
HACL1
SPAG8
HINT2
BPGM
CYLD
ATP5IF1
PPP1R3F
FOXP3
MTOR
ZFYVE26
RAD51B
ATG9A
ANKZF1
SLC25A19
KHDC4
ANP32E
POTEF
SRP9
ARL17B
ARL17A
GSK3B
SNRNP25
POLR3K
STK40
PNKP
SPC25
CKAP2L
THAP1
INTS4
MAP3K3
CCDC66
SSR3
ETV5
PSAT1
NF2
H3C15
H3C14
H2AC19
H2AC18
PSMA5
SPRYD3
ENSA
TPRKB
FDXR
TMEM218
OTUB2
UNG
ALKBH2
FDPS
TMPO
WDR89
RWDD1
MYH10
LAPTM4A
ANKRD39
IBTK
ZNF774
TROAP
RGMB
EHBP1
FAM117A
MZT1
BORA
RBM14-RBM4
RBM14
FAM83D
ANP32A
HOMEZ
LTN1
MXD1
NAT16
PGK1
COPS7B
PDE6D
AGPAT5
INCENP
DCTN4
ZNF724
LMAN2
OPA3
VPS35
RUVBL1
NFYC
MACO1
BCAS3
PCNX3
MAP3K11
KDM4D
CWC15
LCA5
ZNF564
HIKESHI
UVRAG
KLF1
GCDH
ATP7B
ALG11
MVK
PPWD1
CENPK
NEK10
PCLAF
CKAP5
RBM15
MSTO1
TRAPPC6A
BLOC1S3
PPP2R5E
MRTFA
TMA7
CCDC51
TRAFD1
ZNF595
GLCCI1
TCTN3
OSCP1
YWHAQ
PRMT1
VIRMA
C16orf95
DDT
CYB5B
DICER1
TTLL5
ERG28
FER
KBTBD8
STK11
NDUFS8
JPT2
CCDC77
TMEM45A
H2AX
NCBP2AS2
NCBP2
MAMSTR
STARD3NL
DBP
SIVA1
EIF3F
WAPL
ADAMTSL5
PNKD
CCDC146
CEP68
AAMP
TRIM68
F11R
MYH14
HMGCR
NDUFB3
FAM126B
RND1
YBX1
RLN2
COPS4
CDR2
RPS5
PAF1
PLEKHA8
PNPO
PPM1B
RAP2A
PSMB7
RLN1
TMEM161A
GLO1
TMEM205
CCDC159
DAZAP2
CYB5A
C19orf67
GIPC1
WDR25
WARS1
TXNDC16
GPR137C
BAGE4
BAGE3
BAGE
YIPF4
GID4
ATPAF2
RRP9
PARP3
TIMM17A
SFXN5
AGAP2
TSPAN31
KIF1B
PLPBP
TLE3
CKS2
TTC16
PTRH1
ING1
HJURP
RMI2
MTRNR2L1
FRMD5
KDM4A
ZMYM2
SLC33A1
TTF2
MDM1
SEC31A
THAP9
FBH1
ANKRD16
TMEM53
ARMH1
TBCB
ADD1
POLR2I
OVOL3
TANGO2
ARVCF
C2orf42
POC5
CCNL2
FAR1
MCM5
ZNF141
RNF41
NABP2
TWNK
MRPL43
SPRING1
RNFT2
ETF1
MAGI3
HNRNPR
TULP3
NME7
BLZF1
CDK5RAP3
LZTFL1
ARL6IP1
DDX19B
GET3
AARS1
MCM3
KMT5C
VPS26B
NCAPD3
NOL6
PMPCB
ZMYM5
SUFU
ACTR1A
RTN4
BRIP1
PSENEN
LIN37
CWF19L1
WBP1L
CEP131
NARF
MCCC1
KANSL2
ZC3H10
RPL41
ING4
PMS2
AIMP2
RAB5C
SF3B5
RPL13A
ZNF436
TPRN
TMEM203
NDOR1
RBX1
FAM161B
COQ6
CDC25A
GFM1
TOMM22
SCGB1C2
RTN4IP1
QRSL1
HNRNPAB
TSACC
CCT3
PCYOX1L
MON1B
PCGF2
RBM48
PEX1
HMGB2
KLF6
FICD
HSCB
CHEK2
DHX8
DDTL
STPG1
NIPAL3
TTBK2
NDUFA2
IK
PPP5D1
CALM3
PICK1
ALKBH3
PHF14
USP1
SZT2
MED8
TPX2
UFD1
CDC45
L3MBTL2
POTEE
ZNF513
LAMTOR4
ZSCAN32
ZNF174
RNF121
LOC100133315
NSDHL
CETN2
TXNIP
LIN52
ALDH6A1
SNX32
SELENOI
ADGRF3
PTMA
TMBIM6
UTS2R
MRPL20
CEP164
SLIRP
ALKBH1
ZCCHC17
SNRNP40
GGCT
CCNB2
UTP23
EIF3L
ANKRD54
EHD4
RARS2
ORC3
CAB39L
SETDB2
CHAF1A
SH3GL1
ARAF
C5orf51
SETD3
CCNK
ORC2
RPL18A
SLC26A2
TMEM38A
SMIM7
RAD54L
SARS2
MRPS12
DNAAF3
RNF103-CHMP3
RMND5A
WBP11
C12orf60
KANSL1
WDR81
XPO1
PARL
TIMM44
SFPQ
SMARCA2
SERP1
EIF2A
RPA2
HMGB1
CCDC130
CALU
PMF1-BGLAP
PMF1
PPOX
FAM185A
ZNF789
OSBPL9
SHKBP1
RUVBL2
GYS1
MFAP3
FAM114A2
CHD6
MTRR
FASTKD3
ELAC2
CDC25C
PPP2R5A
EIF5
FHIT
CABIN1
ZFAND4
IP6K1
ZBTB9
RERE
CAND1
WDTC1
XRCC4
TMEM167A
CNNM2
RAP2B
TXNL4B
DHX38
TTC31
MRPS30
CCDC142
ZNF688
SLF2
SPC24
FNBP4
HSD17B7
RBM4
MAP3K7CL
CCT8
BMT2
RNF34
ZWINT
BAZ1B
RCL1
MIIP
PPP6R3
NEU1
EPN1
WHAMM
FSD2
ABCA7
CIART
TMED10
TPD52L2
ABHD16B
RUBCN
PPM1K
DAPK3
CDCA8
C1orf109
RACGAP1
EIF2B2
ATF7-NPFF
ATF7
STXBP5
KIF20A
BRD8
VBP1
C14orf93
INPP5B
RRN3
PAK4
RAB6A
SETD5
MPHOSPH8
RAB39A
CEP152
AURKAIP1
NOL7
ATP6AP1
NAP1L4
KMT5A
ZNF740
CSAD
PCBP2
HSD17B12
MLH1
EPM2AIP1
WDR45
ASPM
ENPP5
PPP1R12B
TECPR1
UBP1
NCOA2
ALG10B
VPS4B
MED15
SWSAP1
ID2
EXD1
CHP1
PNRC2
CYGB
PRCD
COX14
BUB1
TUT1
NUF2
GTF3C5
CHCHD2
RPS26
CEP192
PGAP2
MORN2
DHX57
FCF1
AREL1
DLGAP5
PIK3CA
TPCN1
IQCD
RBM6
MCRS1
RPL31
CHCHD3
SCAI
PHF12
RPN2
MROH8
SNRPE
UBE2S
MIGA1
PITX2
KDM5A
WDR46
PFDN6
ZNF586
GRK6
CLIC1
MSH5
SLC39A1
CREB3L4
TOGARAM1
KLHL28
RAB8A
LMBR1L
TFB2M
CNST
TMEM256
NLGN2
ZNF493
KRI1
CDKN2D
C9orf85
ABHD17B
OARD1
NFYA
TRIM9
DCAF4
IVD
ZNF547
TRAPPC2B
BRAP
ACAD10
KLF5
PDCD11
ATP5MD
USP16
MORF4L2
ROGDI
ZBTB26
SPNS1
MOSPD3
SMIM12
NDUFAF2
ERCC8
SP3
BBX
TRAF7
SLC39A3
MFSD12
ISY1-RAB43
ISY1
INTS1
RPL27
DHCR24
AGFG2
GTPBP3
ANO8
ZBTB6
ZNF773
HYKK
MRPS10
EIF1AD
BANF1
STARD7
TMEM97
PRDM10
POLR2J3
BOD1L1
SCOC
PGD
TLE4
DYNLL1
COPS7A
DPH7
APOLD1
RASSF7
LMNTD2
FAM156A
NHP2
LINC02210-CRHR1
ZNF529
ASB8
CAT
PNN
TRAPPC6B
EFCAB14
KCTD9
CDCA2
MIEF2
FLII
POP5
ZFAND2A
UBL5
SAMD10
PRPF6
CCDC174
SLC44A1
SNRNP200
SDF4
B3GALT6
EXD2
PRPF8
ZNF444
ZNF718
NR3C2
PPFIBP1
XRRA1
SPCS2
TDP1
EFCAB11
MCM6
ZNF720
FBXO31
MAP1LC3B
CREBRF
GART
ERCC2
POLL
DPCD
PSME3IP1
RSPRY1
ZMAT2
RNF26
FAM228B
C6orf89
TSTD2
NCBP1
CCNB1
LARP4
FAM186A
SF3B6
WDR62
THAP8
HLTF
ANKRD28
NT5DC2
SMIM4
INTS3
ZNF419
PACSIN2
SNRPD2
QPCTL
PPIP5K1
CKMT1B
TRIM45
STAT2