ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX682379 | TSU-1621MT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◣ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ARSG
INAFM2
PARK7
CCDC88A
ARID5A
DIAPH1
GRHL3
CCPG1
C15orf65
USP15
LYL1
POR
SLCO4C1
IQCH
AAGAB
ARID3B
SPATC1L
RASSF2
C11orf24
SASH3
MRPL34
ABHD8
DDA1
PPIB
NDUFA4
MTMR4
TRAF4
NDFIP2
BIN2
WNT10B
PLEKHO2
KAZALD1
CYCS
FGR
MRPL38
SKIV2L
NELFE
ZCCHC3
KCTD6
KMT2E
ADCY7
ID3
LNPEP
RNF149
NBPF1
IFRD2
NBEAL2
SRPRA
TMEM222
SH3BP2
KCNAB2
RASSF5
HEBP2
SNX3
TRMT6
MCM8
MRPS24
DYNLL1
FAM110A
MAP2K1
JAK3
TBRG4
FAF2
MTCH1
THRAP3
SSX2IP
SNAPC3
AHDC1
CCDC114
EMP3
SLC39A13
SLC35E2B
CDCA7L
ZNF76
NOTCH2NLA
TRIP10
GPR108
ATP23
TRERF1
DUSP6
RWDD2A
PGM3
DGAT2
PRKDC
MCM4
PEX3
ADAT2
POLR2J3
VAV1
NOTCH2NLC
ATAD3B
ATG16L2
CTTN
PRDM10
SLC35E2A
KCNH2
PIP4P2
ZDHHC4
VPS37C
C1orf159
KMT2A
NOTCH2
PRDM1
SH3TC1
TIGD5
EEF1D
RER1
MORN1
RFESD
ZNF25
BUD13
FAM227B
DTWD1
YBX2
NCBP2AS2
NCBP2
ATAD3A
USP21
DENND2D
ASNS
NOTCH2NLB
KIF1C
INCA1
RAD50
CPT1A
HPF1
RPS6KA1
TDP2
ACOT13
CNOT6
DPP9
CD164
RNF139
RNF125
YY1AP1
DAP3
UBE2L3
RIMBP3C
RIMBP3B
PLEC
IL21R
UBL7
PKM
MYCBP2
AKIRIN1
CFD
PTDSS1
MTERF3
MRTO4
EMC1
C21orf91
RNF103-CHMP3
RMND5A
LANCL2
HMGCL
MAGEF1
MTMR1
RITA1
DDX54
ASH1L
GTF2H3
EIF2B1
IQCE
BRAT1
DISP3
RXRA
TAS1R1
NOL9
UBIAD1
SBF1
TMEM199
POLDIP2
MAPK6
DDX23
DLX2
SBNO2
FNTA
C18orf32
RPL17-C18orf32
RPL17
CEP135
NOC4L
DDX51
ZFAND2A
BRAP
ACAD10
CARMIL1
ARF3
IL6R
GSPT1
FKBP1A
SEC14L1
CLIC4
RPS3
C12orf65
IQGAP2
ZNF34
RPL8
TKFC
DDB1
CHST11
ZNF219
TMEM253
TSPAN4
POLR2L
MAPKAPK3
CISH
NMNAT1
LZIC
FCHSD2
RIMBP3
TMEM65
MEF2D
FAF1
DYNC2H1
PCMT1
PTP4A3
GALE
PPIL4
MRPL20
C6orf89
RCC2
HYLS1
SNAPC5
PDE4D
SMAD3
ZNF318
PPP4R3B
BCL3
CLTC
TBL3
RNF151
RAC2
ZBTB17
PRKAB1
PSMF1
NUS1
SFN
ARF4
FOS
RBSN
USP42
TMEM41A
CMTR1
CLN5
MAPKAPK5
RGS14
CTSC
RNF216
TRAM1
PRR19
PAFAH1B3
MT2A
PRKAG1
FLT3LG
PPP1R8
BOD1L1
NDUFV1
SPTBN5
LSM5
AVL9
GARS1
C2
ZBTB12
EHMT2
STARD3
CDC42
ATG101
ARHGAP27
IQSEC1
IDS
ZNF774
ABCF1
HMGB1
USPL1
FXYD2
SEC13
WDR53
FBXO45
DHDDS
DTX2
CBFA2T3
RCN2
RERE
SDE2
MT1H
MT1G
CBWD5
CBWD3
CBWD6
ADPGK
EXD1
CHP1
TRNAU1AP
FAM120B
TESMIN
ABHD12
RNF34
TPP2
HBS1L
NFKBIA
RFC2
GFUS
RNF19A
ZC3H6
B3GALNT2
TUBB3
MC1R
MCU
CCNDBP1
HUS1
TCTE3
ERMARD
THYN1
ACAD8
CCNL2
KCNC3
PHF13
DPEP1
EHD1
ZFPL1
TMEM262
CDCA5
TMEM230
EIF3B
SLC35A1
MESD
EIF1B
RPLP1
DHRS4
DHRS4L2
TAF15
ZZZ3
TAF12
PCNA
DCP1A
PIK3AP1
PEAK3
RWDD1
GZF1
SNAP29
PI4KA
ZCCHC4
IGFBP6
PSMD12
TRIAP1
FBXL18
RANBP3
HTRA2
DQX1
C15orf40
GTF2H2C_2
GTF2H2C
SPRY2
VPS36
CKAP2
CCNL1
TNPO1
UNK
H3-3B
ATG5
FANCE
POLR2J
SDF4
B3GALT6
YTHDF2
POLG
PSTPIP1
ZNF202
CRLS1
LAMP1
F2RL3
RPS6KB2
VPS37A
CNOT7
RB1
REXO1
NRM
PPP1R18
TCF12
STAT1
ETFA
NCKAP5L
EEF2
FAM76B
CEP57
PGK1
ADAM17
RGS16
HES1
RMDN3
MARCHF7
MFN2
DBI
C2orf76
PGD
ZNF277
DOCK4
SCAF1
RRAS
UGGT2
COMMD1
CCT4
ARL4A
RPS28
NDUFA7
INTS1
FDX1
CHAMP1
UBOX5
FASTKD5
BRIX1
EXOSC10
RPL39L
SLC43A3
FRAT2
SACM1L
PSMD6
SMIM14
TAF1B
CSRNP2
UBE2K
SOD2
SIRT6
ANKRD24
IPP
LSM2
TFAP2E
IMP3
SP7
LRRC59
FADS2
FADS1
ARIH1
CD63
SIT1
ZNRD2
FAM89B
EHBP1L1
CAP1
ASB1
ZNF554
PKNOX1
THOC3
PNRC1
PLAG1
CHCHD7
STK38
ZNF436
DNMT1
SNUPN
CSGALNACT2
TXNDC15
NREP
SYNRG
C6orf226
SMAP1
ADORA2A
RPL10A
EFHD2
NSFL1C
PDAP1
BUD31
DNAJB2
MTRNR2L2
MSH3
DHFR
CCZ1
MIA2
DDX46
RAB1A
CNPY3
ARL8B
SLC16A6
SF3B2
GAL3ST3
STRADA
ORMDL3
TRMT61B
LRRC37A3
SYPL1
PURB
FOXN2
SPDYE14
SPDYE10P
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
COPS8
RMC1
DSCC1
ATL3
GTF2H2
NXF1
GTF2A2
MYL12B
STAU2
NOC2L
KLHL17
CHPF2
GMCL1
GCFC2
CCZ1B
ANKRD36C
CHD2
RPS15
MTRES1
RPS16
AP5Z1
TAF5
MANF
TMEM217
TBC1D22B
CHMP7
AP4E1
FADD
F8
F8A3
F8A2
F8A1
H2AB3
H2AB2
H2AB1
RNF141
GNA13
NFU1
CYB5R4
SSR3
ZC3H3
CBR3
H2BC5
H1-4
SPRYD4
KAT5
KAT8
GET4
DOHH
TMOD3
GPSM3
WDR27
C6orf120
USP32
MAD1L1
MTF2
MTHFD1L
DNAJC11
ACAD9
ZNF451
CCM2
DDX19B
AARS1
BIRC2
MAN2C1
NBN
ARID1A
ZBTB2
POLR1F
RBM15B
SNX17
EIF2B4
RPL35
ARPC5L
KIF23
ARPP19
MIB2
RARS2
ORC3
CDC25C
FAM53C
MSANTD2
DTNBP1
SPPL2A
RPUSD4
FAM118B
STX11
ME3
FLCN
PSMD11
SDHB
GPAT3
SYNJ1
C1orf232
ZNF593
RTN4
UCKL1
WASF2
PHF19
SELENOW
AMACR
C15orf39
FAM133B
MALSU1
NELFA
C5orf51
MALT1
PGM2
METTL23
JMJD6
ACOX3
TRMT44
CDIPT
ZCWPW2
AZI2
FAM91A1
SNX1
CIAO2A
PGLS
SH3BGRL3
SETX
SAXO2
EFL1
ANKRD13D
OST4
OSBPL3
MT1E
GLYCTK
UNC50
COA5
CFL1
MUS81
WDR61
P4HB
MARCHF3
ICE2
FANCD2
CDK11A
AURKAIP1
TIPARP
PSMD3
AMD1
WDTC1
CCDC134
ZYG11B
IFNGR1
KATNA1
MYLIP
MTHFR
CLCN6
TMEM127
RMDN1
CIAO1
TYROBP
HCST
PGS1
ANKRD36B
NFKBID
STMN1
UBE2Q1
LATS1
RLF
UPF3A
FBXO22
ZNF414
UCHL5
RO60
POLR2M
RUNX3
TRIM13
PIKFYVE
ZBTB8OS
RBBP4
NRROS
RNF14
RPN2
MROH8
TASOR
UBA52
TEKT2
ADPRS
LIG4
ABHD13
DPP8
WTAP
CASC3
CDKN1A
GABPB1
TM9SF2
OTULIN
ARHGEF39
KCTD5
C11orf97
NCOA3
HPD
PSMD9
PCTP
ZNF696
ZMAT3
BCKDHB
PHF6
FAM207A
FUNDC2
MARCKS
DGAT1
AP5S1
ARHGAP23
NME6
RRAGC
KLHL7
CARHSP1
GTF2I
GSTP1
HDAC1
ITPRIPL1
PSMG3
MUL1
WDR25
WARS1
PTP4A2
IST1
IER3
FLOT1
PSPH
CCT6A
CLYBL
MAP2K5
NFRKB
LONP1
CATSPERD
TMEM60
PHTF2
TGIF1
NGRN
CEP112
HOXC5
ZNF740
CSAD
HSPE1-MOB4
HSPE1
HSPD1
USP3
TOE1
MUTYH
MIDEAS
ZBTB9
EFCAB14
KPTN
TRMT2A
RANBP1
CUL7
FST
ECI1
EFCAB13
MLLT11
CDC42SE1
LRRC47
MINDY2
SNRNP200
RPP21
GPCPD1
RAB3D
OGDH
CRBN
ZBED4
CAPN15
PDIK1L
CDC42SE2
OVCA2
CCDC88B
USP4
WASL
FBXO41
TIMM44
LY6G6F-LY6G6D
LY6G6F
ABHD16A
NAA40
IER5
UHRF2
WDR18
HDAC2
ABCF2
MNS1
TBC1D14
TEFM
MPC1
TUBGCP3
ATR
BTBD1
SNX19
HMGN2
BZW2
ANKMY2
MRPS15
RPL36
POLE4
FBXO43
POLR2K
LUC7L
CPT2
TFRC
GGCX
SPAG4
MRPL4
PSMD8
CHIC2
TSN
MARCHF6
SSBP4
ARMC2
URGCP
ZBTB40
UBE2D4
NOM1
HNRNPF
CYP4V2
WDR70
ID2
NOL11
LCE3A
AIF1
PRRC2A
TNFRSF9
PBRM1
GNL3
CEP164
BHLHE40
PC
LGALS1
MED4
NIBAN2
CDKN2AIPNL
POLR3D
ESYT1
KAT2B
INTS8
ERMP1
MICU2
PPP1CC
WDR73
NMB
FAM111A
LONRF3
FAM222A
PHLDA1
PIGU
TMEM50A
NR1D1
CAPRIN2
GTF2IRD2B
SNX12
PA2G4
DGKZ
PTEN
KLLN
FKBP5
APMAP
GOSR2
MLEC
RNF168
AGO3
SGK1
CASTOR2
PPP5D1
CALM3
SLC43A1
MAN2B2
DIABLO
SRSF2
MFSD11
UFL1
CBWD1
NUDT1
MRM2
NUDC
TMTC4
ZBTB45
YKT6
POLR2J2
DNAH7
TARDBP
HNRNPM
DOCK2
CIPC
STMP1
LRCH3
MON2
TMED2
MED23
ANKRD36
PLXNC1
IPPK
ITGB1BP1
CPSF3
CHMP4B
RNASEH2C
ATP5MG
MIDN
UBE2Z
RNF41
NABP2
MFSD4B
LRCH4
FBXO24
MDN1
FIBP
CCDC85B
SLC24A1
INTS14
TMEM39B
TXNL1
MKS1
TAB2
ZNF397
ACTR3
HEXIM2
TMEM248
NDRG1
GADD45B
ACAT1
HSPA8
CEP43
DPY19L4
PIK3CD
GTF3C6
CLPP
GPAA1
EXOSC4
ELMO1
FOSL1
BRWD1
TTC9C
HNRNPUL2
SDCCAG8
CEP170
ATP6V0A2
EEF1A1
EIF2AK1
RAB5IF
TOMM22
VCPKMT
VOPP1
MRPL58
FES
C8orf76
YARS1
S100PBP
ATAD2B
TGDS
NIPA2
VPS37B
TMEM30A
CLCC1
HNRNPD
GORASP2
PDCD2
R3HDM2
INHBC
CEP85
USP19
NINJ2
N6AMT1
ZNF721
PIGG
SUB1
SUSD1
KCTD2
ATP5PD
LTV1
MT1F
TPT1
MVK
THUMPD3
PRKAR1B
PPT1
RPL29
TIGD6
HMGXB3
NRDC
VPS13C
USP48
NTMT1
ZFAND3
ANAPC11
ALYREF
EED
TRA2B
SRM
SMIM12
SLC26A8
MAPK14
NR4A2
TIMM50
ACER2
PFKM
CENPH
SENP1
FAM219B
NUP214
AAAS
MYEOV
TEX46
KDM1A
PARL
H2AX
TCEA2
ZNF584
CENPS-CORT
CENPS
UPP1
MTRF1