ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014770 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◣ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

HMGCS1
MTRNR2L8
MSMO1
MTRNR2L2
MSH3
DHFR
FDPS
MXI1
FDFT1
MTRNR2L1
SREBF2
FRG2
MVK
ARAP1
UNK
H3-3B
HMGCR
ACSS2
GGT7
COL23A1
HSD17B7
RPL22
HYAL2
OGA
CYTH2
TMTC3
CEP290
PLEKHA8
SYNGR4
CHCHD3
VCP
GHDC
DLG2
TMEM126B
TSNAXIP1
RANBP10
PPME1
C2CD3
PSMD3
STARD3NL
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
RWDD1
CACTIN
POLR3F
DZANK1
TAOK3
SUDS3
IPO13
DYNC1LI2
NUP85
VDAC2
PSMG2
CEP76
FAM187A
EFTUD2
CCDC103
HSPA9
NVL
VTI1B
NUP205
POLR2E
RPL21
GOSR2
TBCK
AIMP1
MRPS7
GGA3
ZNF503
NCLN
DCTN1
EXOSC5
BCKDHA
ATP5MG
C19orf48
STAM2
HADHB
HADHA
REXO1
SRD5A1
STAM
TSNAX
BLCAP
SKP1
FARSB
SEC61B
ALG2
FRG2C
PES1
LYRM4
FARS2
SLC35B1
UPF2
TSN
ZNF576
IRGQ
NDUFA4
BABAM2
RBKS
ACTR10
PNO1
PAK1IP1
C6orf52
CAPRIN1
RBBP5
PSMD12
DPH6
COX7A2L
GOLGA5
IQCG
TTC8
SART3
ISCU
SUPV3L1
TMED1
RPS23
ATP6AP1L
VARS1
RPL35A
ZRANB2
PI4KB
MRPS5
SMC2
ANAPC7
DUX4
PDAP1
BUD31
EIF4ENIF1
ADK
PCBP1
USP1
SELENOF
HS2ST1
FAM104A
C17orf80
AP3M1
ICE1
NEUROG2
UFM1
RPS12
RABGGTB
PROSER1
NHLRC3
SF3B3
COG4
XPNPEP3
ST13
APOM
BAG6
ZGPAT
ARFRP1
RPS27A
CLHC1
OSGEP
APEX1
TM9SF1
COMMD1
PAF1
CCT4
NEUROG3
HES1
PDE6B
RPS29
RARB
HES3
PDE12
NFKBIL1
DDX39B
ATP6V1G2
PTGES2
SKIL
HOXA4
UBE2I
LRR1
CDX2
PIN4
OR6B2
NDUFA10
SPATC1L
CYP26A1
VEZT
FGD6
IGFBP6
SOAT2
FZD8
ARID3B
ARHGAP11A-SCG5
ARHGAP11A
NFE2
HOXA3
MRTO4
EMC1
SUCLG1
TAF9
RAD17
AK6
PMAIP1
IER3
FLOT1
SP2
ARHGAP10
ID2
NDUFS7
STK36
RNF25
DHRS3
RARA
ZP4
NEUROG1
SYBU
TMEM107
OAZ3
MRPL9
ATOH1
NEUROD1
EIF2S3
RPL7
RDH10
KAT6B
SEC11C
SH2B1
DPP9
BICRA
GADD45GIP1
BNIP3
ERCC1
LEFTY2
BBS9
IGFBP2
LBX1
SPATA25
TPM1
TRIP10
GPR108
H2AW
TTI2
TLE3
NEURL2
CTSA
HOXA2
ST18
HOXA1
TBX3
LIN28A
ASB2
CCDC200
INSM1
DUSP6
CNPY2
CDCA7L
TEPSIN
NDUFAF8
WDR74
GTF3C4
DDX31
ERRFI1
DNM2
ZNF746
TLE4
FGF19
TPRA1
FOXP1
CDC73
CCDC33
HOXB3
PCBD2
P4HB
FBXO31
NPAS4
PDHX
APIP
MINDY2
HPD
PRUNE2
PHOX2B
ANKRD28
DLL4
SP5
RPN1
TMEM70
ELOC
PDE4D
PDHB
SMAD3
C16orf91
CCNDBP1
MRPL34
DAPL1
TBX2
SPCS1
GLT8D1
CLGN
LPIN1
ZNF383
ARHGEF28
CAMTA1
RAB5B
RUNX1T1
GORAB
ID3
KANSL3
FER1L5
TMEM120B
KIF21B
STX18
DCTN3
DLX4
TLE1
ZFHX3
RXRB
PHC2
DONSON
DOLPP1
ARID3C
ANKLE2
ANK2
HOXC4
PGK1
METTL24
SLC39A7
SYNPO
ATF6
TNFRSF19
RBPJ
MSX1
OTUD7B
CCN1
MFSD10
UPF3A
PRRX1
KDM6B
KATNB1
SMPDL3A
SQSTM1
ARRDC4
LZTS1
XKR7
TRIB1
MRPL38
PDZRN3
FRA10AC1
PPP6R3
ABCC10
RARG
NINJ2
ZNF687
HUS1
BCL3
POP5
RFX1
CLCN3
ABHD2
MYLK4
CS
NR2F1
MTMR4
GATA4
GPCPD1
PANK2
ZFHX4
NRL
ZNF367
PCGF2
NBPF1
CCDC174
KCNAB2
TOP2A
KDM2B
CCNL2
PSPN
ALKBH7
SIRT4
ID1
CNOT2
ALKBH5
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
NUBP1
ADAP1
BAIAP2
ITGAV
FOXP2
FURIN
NFKBIA
SMARCD2
MIDEAS
PCGF1
LBX2
SACM1L
TLE2
IQSEC3
NR2F6
RNF103-CHMP3
RMND5A
DCAF11
CNTN1
RASSF5
SP1
PKDCC
PCNA
ZFAND2A
OSBP
NLK
PPCDC
ABHD8
STIP1
EIF2AK3
KAZALD1
RNF207
CSF3R
RHBDD1
SOD2
AHDC1
LRATD2
DNAJB7
MDM2
ATP5F1B
GADD45G
SLC45A4
HEXIM2
RAB11B
KNL1
RBBP7
AGO1
ZNF608
POLDIP3
G3BP1
LPCAT3
KMT5A
NCOA2
EVI5L
CITED2
KDM8
DSCAML1
RTN4
TRAF7
MACROH2A1
FTL
DYNLT1
JUP
PXYLP1
DDA1
MALRD1
GPC6
SREBF1
FAM107B
SMIM20
MEIS2
SLC7A5
CRLS1
GRSF1
SOCS3
B4GAT1
TRIM46
EVA1A
CBFA2T2
MYRIP
SHF
MIDN
HNRNPD
METTL11B
RGS12
RBFOX2
PLEKHG2
SPG7
ARHGAP24
POLG
CCL26
ARSG
GLRX5
ANTKMT
SSBP4
FST
DAGLB
SLC6A12
QPRT
LCK
FAM167B
GADD45A
USP17L20
PSMD6
SEPTIN9
INAVA
ZFP36
BFSP1
NCDN
KIAA0319L
PRMT5
NEK3
EIF3D
ATP6V1E2
SLC30A4
STAP2
ACYP1
MYEOV
TMEM94
HPCAL1
SH3YL1
ACP1
NELFA
H3C12
H2BC17
H2AC17
USP17L22
DIABLO
FGR
ADM
MRPS28
PLEC
SEC22B
RGS3
CYP51A1
RAB37
COX5A
STX1A
SERPINB1
SERPINE1
SNCG
MMRN2
HOXC6
LRCH4
FBXO24
RHOQ
CACNA1D
TCF7L2
ANKMY1
CEP41
FRMD3
ARHGAP4
CAPNS2
RPS24
POLR3A
CNKSR3
KMT2A
NKD1
CPT1A
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ROGDI
DNAJB3
LTBR
BRMS1
MRPS24
SYNJ2
LIG3
LAPTM5
ARHGEF10L
HOXC5
MTF2
TES
PRDM10
PHETA1
RNF166
AXDND1
KCTD7
EFEMP2
RAC1
CDS2
INSM2
HNMT
ARID5A
HOXB1
CSRNP1
UGP2
MBD2
CIC
CMSS1
USP42
ARID4A
ANKRD1
DUSP9
ILF2
LFNG
PNKD
ARL8A
ZNF414
PLAGL1
TDRKH
LNPEP
TUBB4B
TXNRD1
DLC1
HTR5A
AIFM2
EVPL
SEC14L1
HIBADH
DMBX1
INAFM2
IKBKB
WTAP
LMNA
LUC7L2
LRP5L
GTF3A
PRKACA
UBE2F
HMGB1
LAMP1
MBD6
DDIT3
NRSN2
MLEC
NR2C1
KDM3A
MSX2
KLHDC2
MT2A
IL6R
HOXB4
BHLHE40
ARID2
RAI14
COMTD1
TCTEX1D4
BTBD19
IQGAP2
CFL1
C12orf73
TIGD1
EIF4E2
CPSF4L
TUBGCP3
HNRNPA2B1
CBX3
TPCN1
VOPP1
RBM15
TLN1
CREB3
ABCA4
SH2D6
UACA
ZNF77
CCDC88A
RNF34
CCDC88B
RNF149
NRCAM
NEDD9
CR1L
RNPEPL1
TRABD2B
LRIG1
EPM2A
SH3BP2
IRF9
PIKFYVE
PIGV
SYTL3
ZNF3
H6PD
ING1
GOT1
RPS10-NUDT3
RPS10
TBL1X
HSPA1B
PAX6
RASSF2
MYADM
EIF1B
CDK6
CCL16
KRI1
CDKN2D
E4F1
ANKS4B
CBX4
NANP
USP3
ZNF76
KCNH7
CYB5R4
PRDM12
TF
METRN
IFI16
DCAF7
NKIRAS1
KLF6
TRAF4
WDR97
MAF1
TRDMT1
SCAP
NCOA7
ZNF595
ORMDL3
CRKL
SEMA5B
POLR3E
GFOD1
INHBE
NKX1-1
GPAA1
EXOSC4
ZDHHC4
ZNF827
CBX5
MARCHF3
CXXC5
STX16
ATP2B2
CASC3
CLK1
PC
ICAM1
ATG16L1
ERI3
SMIM11B
SMIM11A
CEBPE
TRIM7
RXRA
TSPAN4
POLR2L
NCBP2AS2
NCBP2
SORBS2
ENO1
SLC25A19
SRSF11
KPNA4
UGT1A1
FAAP24
CEP89
IRS1
GSN
PCTP
PARK7
HECTD4
UNC13D
ATP5MC1
USPL1
TRAF2
PLEKHF2
TACC1
L1CAM
ANP32E
CELSR3
PKM
MPND
PXMP4
MPC1
TTC30B
GPT2
GGT1
NEO1
CCDC114
SH3BP4
HSP90B1
C14orf93
ZC2HC1C
SULF1
ETV4
PAQR8
TMEM60
PHTF2
UBE2C
SRCAP
LOC730183
GPATCH8
RNF144A
RHBG
ETFBKMT
LRRC40
SRSF2
MFSD11
DBX1
LMO4
FAM24A
HNRNPC
TANK
GPR35
RAB17
LASP1
FLAD1
TMTC4
ALDH4A1
GSTP1
ATP23
MPV17L2
CBFA2T3
MAP1LC3B
ABLIM3
UBXN10
SDSL
CDC42EP3
ADGRL2
TXNDC11
SCYL1
POLR2J3
ARNTL
LYL1
SHB
CCDC59
KMT2E
STARD4
MVD
FILIP1L
TBC1D8
CYCS
DEAF1
ZNF148
PRAM1
CCDC38
AMDHD1
ZCCHC3
SNX3
MTRF1L
SLC25A6
YARS1
S100PBP
PACSIN2
LRRC59
NRM
CCDC107
DNAJB1
ATP5MPL
TMPPE
GLB1
FAM72A
ELOVL6
HNRNPUL1
ERBB2
TOMM40
AK2
CAT
SERPINB9
ZNF740
SHC1
CSAD
CKS1B
TCERG1
TMEM59L
CRLF1
PITPNM1
ARIH2
CALM2
MAPKAPK3
KPNB1
FMC1-LUC7L2
FMC1
PEX14
DFFA
GRWD1
PLEKHO2
LRRN4
TMC7
PGP
LDLR
BRICD5
MLLT6
C8orf37
TMEM14A
DCP1A
KHSRP
NAT8
BCAR3
WBP1L
BAZ1B
FAM227B
DTWD1
DNAJB8
ABCB1
INPP5D
NRSN1
WDR18
FAM228B
KIF26A
H4C12
FGG
TYRO3
PCM1
TYROBP
GATD3B
GATD3A
TOP2B
SLC25A51
CCPG1
C15orf65
UPP1
CATSPERG
SKA2
PRR11
SIRT1
DTX4
CDX1
PIM1
NBEAL2
ABCG2
LSM2
CXCR4
CPLX2
ATXN1L
SHOX2
RSRC1
MRS2
PANK4
HES5
URGCP
NBN
JUNB
JAK3
TUBB
FBXO41
CCNL1
STK38
PRR14
PACSIN3
DBP
RAB11A
HOXD3
HSPA5
PAX8
DMD
ANKRD39
FRAT2
TMEM169
PECR
NFE2L1
ITGB2
PPFIBP2
DAOA
AKAP1
NUF2
NR1D1
SPINK1
PAM
CASD1
KAT7
ZNF219
SLX1B
SLX1A
FASTKD1
BOLA2B
BOLA2
SCNN1A
C11orf24
BORCS6
SKIV2L
NELFE
MEF2D
CNPY3
SPAG8
HINT2
FRMD5
ASB6
PKN2
CCDC57
NUMB
PSMD9
DCDC2
VWA1
KCNK16
GLI1
RAB3D
IGFBP5
MEF2C
JAK1
ACTL6A
REV3L
TMEM9
OPRL1
IGF2BP3
SPIN1
NTMT1
RGPD1
KAT6A
RPS6KA1
OTX1
PTPDC1
TLCD4-RWDD3
TLCD4
MANF
TRIP4
SLC25A25
NTAN1
HEBP2
MRPL4
HBP1
MMP15
ENOX1
LONRF3
HIVEP2
C3
MAMSTR