ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◣ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
POLR3F
DZANK1
IPO13
DYNC1LI2
CACTIN
FAM187A
EFTUD2
CCDC103
NME6
NUP205
MAPKAPK5
NEUROG3
PSMG2
CEP76
TAOK3
SUDS3
RPL21
NUP85
MRPS7
GGA3
VDAC2
NVL
HSPA9
DCTN1
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
BABAM2
RBKS
POLR2E
ATP5MG
C19orf48
SEC61B
ALG2
PAK1IP1
C6orf52
SMC2
EXOSC5
BCKDHA
SRD5A1
ZNF576
IRGQ
ACTR10
MRPS5
NCLN
TMED1
SLC35B1
COX7A2L
TTC8
TSN
PI4KB
NEUROG1
PNO1
FARSB
PDAP1
BUD31
LYRM4
FARS2
GOLGA5
PDE6B
ADK
AP3M1
PES1
BLCAP
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
IQCG
RPL35A
RPS23
ATP6AP1L
EIF4ENIF1
ZNF503
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
SELENOF
HS2ST1
RBBP5
CDX2
SART3
ISCU
NDUFA4
USP1
NEUROD1
ANAPC7
PSMD12
ICE1
CDCA7L
UFM1
FRG2C
PCBP1
TMEM70
ELOC
APOM
BAG6
PROSER1
NHLRC3
OSGEP
APEX1
DLL4
PAF1
MYRIP
SF3B3
COG4
ATOH1
DLX4
RABGGTB
XPNPEP3
ST13
ST18
INSM1
PTGES2
CABIN1
RPS12
PIN4
VEZT
FGD6
DUX4
ZGPAT
ARFRP1
RPS29
LRR1
FRG2
OR6B2
NDUFA10
RPS27A
CLHC1
EIF2S3
RBPJ
NFKBIL1
DDX39B
ATP6V1G2
HES1
GALNT10
BNIP3
POP5
GADD45GIP1
RBL2
RPL7
RDH10
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
DNAJB8
PCBD2
LPIN1
TRIP10
GPR108
DTNB
ID3
ZNF746
MRS2
RAB11B
HSPA1B
WDR6
ANKLE2
NEUROG2
SHB
GADD45G
MRTO4
EMC1
ANKRD1
ACOT2
PDE12
SEC11C
STK36
RNF25
PRUNE2
DAPL1
FGFRL1
ZNF664-RFLNA
ZNF664
CCDC92
CCNDBP1
PDHX
APIP
FZD8
GBX1
LEFTY2
PMAIP1
HESX1
MSX2
CCDC33
TLE2
SKIL
RYBP
NFE2
EHF
AXDND1
GTF3C4
DDX31
ARHGAP11A-SCG5
ARHGAP11A
NKIRAS1
NR1D2
APLN
SLC25A6
ZNF704
ALKBH5
TPRA1
ZNF383
SUCLG1
PLA1A
MBNL2
MSX1
FRAT2
RPN1
FOXC1
NXPH4
SPIN1
DUSP6
ZNF649
ARHGEF38
MAL
TIGD1
EIF4E2
PAX8
CDC73
MAST2
ID2
ACOT1
GABRB2
TLE3
RARA
LIG3
TVP23C
UBE2I
SPCS1
GLT8D1
CNTN4
LYPD6B
OAZ3
MRPL9
TRPM3
UPF3A
AP3D1
CCDC200
SRSF11
LRRC40
GSR
MEOX1
S100A10
LIN28A
CNPY2
RAN
RTL10
GNB1L
FOXP1
METTL24
SKOR1
LMO4
FTL
BFSP1
GC
CERKL
TPM1
MELTF
HOXB9
KDM6B
RARB
RIMS1
NEFH
RUNX1T1
BCAT2
RAD54L2
RSPO4
RBBP7
KCNK2
ANTKMT
METRN
CDX1
B3GNT4
USP17L20
USP17L22
USP17L21
USP17L12
USP17L11
KRTAP2-2
KRTAP2-1
AP1B1
CALM2
TMEM275
DMBX1
PDHB
PRSS47
NTNG2
GSX1
CYP26A1
CBX4
TBC1D8
SYNJ2
TMPPE
GLB1
COL11A2
DUSP4
SLC22A24
GATA4
LCOR
INKA2
PKDCC
MKRN2OS
MKRN2
KAT6B
RPS10-NUDT3
RPS10
UBXN11
CD52
KIF21B
HOXB1
MTCH2
BANP
ADM
APBB1IP
CLEC10A
ZNF850
USP17L18
PHLDB2
USP17L19
C15orf61
FBXO32
DUSP14
SHROOM1
CCDC174
NAGLU
DDX3X
KRT18
TNFRSF19
OTP
PCLO
HOXA3
ST6GALNAC3
COCH
KAZALD1
SERTAD2
LPCAT3
SMARCA4
BCOR
MRPL38
KMT5A
BICRA
RNF207
GTF3A
SNX1
CIAO2A
CHN2
CPVL
STRADA
FOXP2
SEC22B
GRHL2
KLF17
SNRPA
C19orf54
LYPD1
EIF4H
MLH1
EPM2AIP1
NRDE2
IRX4
OTUD7B
C16orf91
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB17
IGFBP6
SOAT2
SLC4A8
GALNT6
RBM26
HNRNPD
ZFP37
MEF2B
ZNF891
ZNF10
PAH
SEPTIN2
HDLBP
TCF7
SMAGP
ASCL1
MTRNR2L1
UROD
HECTD3
REC8
SCAMP4
ADAT3
PNPLA1
NCOA2
ZMIZ2
KMT5C
H3-3A
PCDH8
RNF32
CNR1
MYSM1
TMEM88B
ANKRD65
PLEKHA6
SLC30A4
TCHP
CLDN9
KCNJ4
CLDN15
TACC1
VENTX
CNPY3
JAKMIP1
WNT3
SYBU
SPATA25
NEURL2
CTSA
COL23A1
ZNF395
ATP6V0A4
MACROH2A1
DYNLT1
ZNF436
AQP7
JAK1
NR2C1
MACF1
TAS2R8
TAS2R7
RPS24
POLR3A
USP17L15
ZNF397
TMPRSS4
HOXA1
JUP
METTL11B
PCTP
BRWD1
SEMA6D
CEMP1
FAM53B
PCDHAC1
CD24
USP44
AGO1
GATA3
STX18
KCNB1
MARVELD3
KMT2A
NRG1
SH2B1
CDS1
EOMES
PEX14
DFFA
KRTAP12-1
SERPINF1
MECOM
ZCWPW1
MEPCE
RUSC2
ESRRG
CLEC4G
STON1-GTF2A1L
COX5A
SNCG
MMRN2
BEND4
OR51T1
FBXL4
SERTAD3
MAPRE1
MAPK12
SOD2
ACAT2
ANXA9
GYG2
CNN2
KCNN2
EVC
EVC2
SH3YL1
ACP1
KCNS3
P3R3URF-PIK3R3
P3R3URF
AKAP10
HINT1
MDM2
NELFA
PRELID3B
GJA10
BAMBI
ADAM17
PLXNB1
ERI1
UFSP2
C4orf47
ERRFI1
TARBP2
MAP3K12
PRKD1
RBBP8NL
ACYP1
ROGDI
ZC2HC1C
YTHDF2
ZBTB25
ZBTB1
CDC42EP3
PKIB
NANP
LIPK
PRDM10
TRAP1
ZNF248
ZNF90
CS
CNOT2
KDM3A
IGF2BP3
LIX1
DNAJB5
CENPBD1
CTF1
BCL7C
BTBD3
PFN2
MRPL34
ABHD8
MAP2K3
KDM7A
SLC40A1
METTL27
IKZF2
CLGN
CATSPERG
NFIC
CDC42SE2
ZSCAN30
KDM4C
BBS9
MINDY2
KCNQ4
TMEM54
ANKRD63
PLA2G4D
ING1
KAT6A
SS18L1
PSMA7
SGK1
PIGU
RBMS3
PTPRG
PDZRN3
CLK1
CTSZ
FAM162A
CCDC58
NTAN1
RPS3A
PXYLP1
CPLX1
ZDHHC17
WDR91
DHRS3
CCDC59
GATD3B
GATD3A
FAM110A
DONSON
PDE4D
HES7
CTBP2
ACTR6
ACTB
TMEM211
GLI1
NRG2
ZNF341
CXXC4
MDK
HES3
ORMDL3
EIF5
RGPD8
RGPD5
PEX2
BCO2
KLHL4
RAPH1
ZNF485
SBNO2
ABLIM3
SNX3
ABCC6
HSPA4L
ZBTB17
NOL4
ZNF827
SRSF10
ZBTB20
HIC2
EPS8
TSHZ1
WDR7
LAD1
PPP1R13B
RPS8
CMTR1
SYDE2
NAA40
TRIP12
FBXO36
SLC11A2
ZFAND6
RILPL1
TBX19
CLCN3
NPNT
TTC21B
IGFBP2
RHOBTB1
PDE4C
MTRNR2L2
MSH3
DHFR
HOXA4
MTRNR2L8
SPATC1L
ARID3B
IER3
FLOT1
SP2
ARHGAP10
NDUFS7
ZP4
TMEM107
DPP9
ERCC1
LBX1
H2AW
TTI2
HOXA2
TBX3
ASB2
TEPSIN
NDUFAF8
WDR74
DNM2
TLE4
FGF19
HOXB3
P4HB
FBXO31
NPAS4
HPD
PHOX2B
ANKRD28
SP5
SMAD3
TBX2
ARHGEF28
CAMTA1
RAB5B
KANSL3
FER1L5
TMEM120B
DCTN3
TLE1
ZFHX3
RXRB
PHC2
DOLPP1
ARID3C
ANK2
HOXC4
PGK1
SLC39A7
SYNPO
ATF6
CCN1
MFSD10
PRRX1
KATNB1
SMPDL3A
SQSTM1
ARRDC4
LZTS1
XKR7
TRIB1
FRA10AC1
PPP6R3
ABCC10
RARG
NINJ2
ZNF687
HUS1
BCL3
RFX1
ABHD2
MYLK4
NR2F1
MTMR4
GPCPD1
PANK2
ZFHX4
NRL
ZNF367
PCGF2
NBPF1
KCNAB2
TOP2A
KDM2B
CCNL2
PSPN
ALKBH7
SIRT4
ID1
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
SMG6
NUBP1
ADAP1
BAIAP2
ITGAV
FURIN
NFKBIA
SMARCD2
MIDEAS
PCGF1
LBX2
SACM1L
IQSEC3
NR2F6
RNF103-CHMP3
RMND5A
DCAF11
CNTN1
RASSF5
SP1
PCNA
ZFAND2A
OSBP
NLK
PPCDC
STIP1
EIF2AK3
DLG2
CSF3R
RHBDD1
HMGCS1
AHDC1
LRATD2
DNAJB7
ATP5F1B
SLC45A4
HEXIM2
KNL1
ZNF608
POLDIP3
G3BP1
EVI5L
CITED2
KDM8
DSCAML1
RTN4
TRAF7
DDA1
MALRD1
GPC6
SREBF1
FAM107B
SMIM20
MEIS2
SLC7A5
CRLS1
GRSF1
SOCS3
B4GAT1
TRIM46
EVA1A
CBFA2T2
SHF
MIDN
RGS12
RBFOX2
PLEKHG2
SPG7
ARHGAP24
POLG
CCL26
ARSG
GLRX5
SSBP4
FST
DAGLB
SLC6A12
QPRT
LCK
FAM167B
GADD45A
PSMD6
SEPTIN9
ARAP1
INAVA
ZFP36
NCDN
KIAA0319L
PRMT5
NEK3
EIF3D
ATP6V1E2
STAP2
MYEOV
TMEM94
HPCAL1
H3C12
H2BC17
H2AC17
DIABLO
FGR
MRPS28
PLEC
RGS3
CYP51A1
RAB37
STX1A
SERPINB1
SERPINE1
HOXC6
LRCH4
FBXO24
RHOQ
CACNA1D
TCF7L2
ANKMY1
CEP41
FRMD3
ARHGAP4
CAPNS2
CNKSR3
NKD1
CPT1A
DNAJB3
LTBR
BRMS1
MRPS24
LAPTM5
ARHGEF10L
HOXC5
MTF2
TES
PHETA1
RNF166
KCTD7
EFEMP2
RAC1
CDS2
INSM2
HNMT
ARID5A
CSRNP1
UGP2
CIC
CMSS1
USP42
ARID4A
DUSP9
ILF2
LFNG
PNKD
ARL8A
ZNF414
PLAGL1
TDRKH
LNPEP
TUBB4B
TXNRD1
DLC1
HTR5A
AIFM2
EVPL
SEC14L1
HIBADH
INAFM2
IKBKB
WTAP
LMNA
LUC7L2
LRP5L
PRKACA
UBE2F
HMGB1
LAMP1
MBD6
DDIT3
NRSN2
MLEC
KLHDC2
MT2A
IL6R
HOXB4
BHLHE40
ARID2
RAI14
COMTD1
TCTEX1D4
BTBD19
IQGAP2
CFL1
C12orf73
CPSF4L
TUBGCP3
HNRNPA2B1
CBX3
TPCN1
VOPP1
RBM15
TLN1
CREB3
ABCA4
SH2D6
UACA
ZNF77
CCDC88A
RNF34
CCDC88B
RNF149
NRCAM
NEDD9
CR1L
RNPEPL1
TRABD2B
LRIG1
EPM2A
SH3BP2
IRF9
PIKFYVE
PIGV
SYTL3
ZNF3
H6PD
GOT1
TBL1X
PAX6
RASSF2
MYADM
EIF1B
CDK6
CCL16
KRI1
CDKN2D
E4F1
ANKS4B
USP3
ZNF76
KCNH7
CYB5R4
PRDM12
TF
IFI16
DCAF7
KLF6
TRAF4
WDR97
MAF1
TRDMT1
SCAP
NCOA7
ZNF595
CRKL
SEMA5B