ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014782 | UPR9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◣ SRX014782: UPR9

◢ RARA: STRING

ARID3B
CPNE5
TMEM104
NAT9
SPATC1
NADK
H6PD
SERPINB13
DSCAML1
EFHD2
CREB3L2
RUBCNL
NDUFA4
JAK3
RNF149
SH3BP2
ADGRG5
NIBAN3
CXCR3
LTB4R
CIDEB
LTB4R2
PLEKHO2
SEC14L1
PRKCD
HRH1
RNF130
STING1
FLI1
CYTH4
CD93
PPP1R18
TMEM53
ARMH1
GPX4
LAPTM5
RUNX1
TOX2
ARHGAP4
SPG7
TGM6
MAP1S
SEMA4D
INAVA
FURIN
USP3
CAPG
TEAD3
ADAP1
ANKMY1
RNPEPL1
TMC6
TMC8
TNFRSF1B
FOXP1
PPCDC
FGR
DUSP6
NFE2
CHST12
SEPTIN9
CBFA2T3
ZFP91
LPXN
PNRC2
ATP13A2
ARL5C
CD82
SYNJ2
ARID2
ERLIN2
TCTEX1D4
BTBD19
C16orf54
MAP1LC3B2
AIF1
ADORA2A
PRRC2A
RFX8
RASSF2
RFTN1
PLEC
RPS6KA1
UPP1
KCNAB2
RASA3
DOCK9
ITGAL
SMG6
KCNK5
ATG16L2
CCL1
SDSL
RNASEH2B
STX1A
ARHGEF25
STAB1
TMEM71
IER3
FLOT1
HOXC5
ARHGAP45
F12
S100A5
S100A4
S100A3
TNFRSF14
CPXM1
GPAA1
EXOSC4
TRIM46
EMILIN1
NCF1
HUS1
IFNLR1
TRAF3IP3
CD38
ZNF740
CSAD
TNFSF14
TES
NR1D1
GYPC
STXBP1
PARP2
MYEOV
ETV5
SCAMP2
C1orf127
KIAA0513
ASB2
BIRC3
NGRN
TXNRD1
KCNIP1
MLXIP
ZNF595
ARRB1
UBC
CLEC3B
ADORA2B
SIAH3
C1QTNF4
MBD6
DDIT3
SLC22A18
FMNL1
DGKZ
MACC1
RAB11FIP1
CSRNP1
MAPKAPK3
S100A2
HCK
NBEAL2
GTF3A
SH3TC2
SLC43A3
TNFRSF1A
ANKRD33
CGAS
CXCL8
DENND3
HOXA1
PILRA
PPFIBP2
NFKBIE
RLN3
UNC13D
IQGAP2
TYROBP
C3
PLEK
PES1
CCDC174
TFDP1
TCN2
PLCB2
OLIG1
AMPD3
RAC2
CCL2
INKA1
MAD1L1
CYFIP2
CD300LF
IGFBP4
LTB
LST1
AGTRAP
OR4D1
TMBIM6
SMIM35
PHF20
SLC25A19
ABHD2
ALOX5AP
PTPN6
LAIR1
PDE4B
SLC1A5
OST4
AKNA
TMEM255B
RAP1A
MTRF1L
DENND2D
AGO2
TMIGD3
ADORA3
RXRA
NNT
MICALL2
RGS12
P2RX7
CEBPE
ENO1
ANKRD13D
SERPINE1
FBXO41
SPN
RAB37
MAST2
RASA4
IGFBP7
MINDY2
CCL3L3
CCL3L1
CCL3
FCGRT
RASGRF1
BCL3
MFSD8
ABHD18
B3GNTL1
TNS3
NOS3
ICAM1
TRABD
PHF19
PDE6B
FOSL2
ARIH2
ARHGEF18
DDAH2
MPIG6B
TM9SF4
CASP8
RAP1GAP2
RNF166
PAG1
LTC4S
CSF1R
CD1C
CORO1A
ITGB2
PRR5
DOT1L
PLAAT2
VAMP2
IL6R
ITGAM
TRIP10
GPR108
NIBAN2
MYADM
VPS26C
TMEM123
PTPN22
PEX14
DFFA
VAMP5
DNAH7
VAMP8
BID
PITPNM2
FCHSD2
TMEM72
UBXN10
PLA2G2C
FGGY
DYNC1LI2
RNF40
CCDC189
CENPH
ASCL2
VAV1
GSE1
TNFRSF10B
DBN1
GPATCH8
HNRNPF
STK16
GLB1L
PKIG
TUBA4B
TUBA4A
YES1
S100P
HPCAL1
SLC26A11
SGSH
DGKD
INSIG1
SPDYE13
TPD52L2
ABHD16B
ZNF414
NID1
ARID1A
CYP2W1
TRAF1
TPPP3
TP53AIP1
GPR183
EVPL
BHLHE40
LIMK1
DIS3L
EVPLL
SLC22A4
NFKBIA
CELF2
ROPN1L
TBP
PSMB1
RHOH
ARHGAP30
MELTF
ICAM2
ATP23
ORAI1
GPR132
FCRL4
MAD2L1BP
GTPBP2
TSPAN14
MRPL34
ABHD8
DDA1
SLC19A1
PHC2
ZBTB25
ZBTB1
CLN8
RAB10
LCP2
TUBA8
BAZ1B
RNASET2
PRDM1
ABCG1
ARHGEF2
SH3BGRL3
SH2B1
SIRPB2
RARA
TNFRSF4
TNFRSF18
SLC22A16
ARPC1B
GLRX
CCND3
KCNJ15
TTI2
CDCA7L
TRPM2
LGALS12
TP53I11
ERAP1
RASGRP2
P2RY6
EIF4ENIF1
RTN4
SPATA1
GNG5
CEACAM21
NINJ2
SNX20
NBPF1
AFG1L
RASA4B
LMO2
GHRL
CD300A
ZNF732
FCER2
UBALD2
SYNE3
PIK3AP1
SLC9A5
FHOD1
RXFP4
PPP1R11
CD300C
ADAMTSL4
P2RX1
RHOG
PSCA
CCL4L2
CCL4
RGS3
SSBP3
HSH2D
LMNA
IL4I1
S100B
MYO18A
TSC22D3
SRCAP
LOC730183
TCIRG1
LAMB3
PMAIP1
PCNA
CDS2
APBB1IP
EPB41
SOAT2
LCK
FAM167B
ZNF22
SMIM3
HK3
DHRS3
ECE1
COLQ
MYO1G
GM2A
ZNF652
PLAU
LDLR
CLIC1
MSH5
RFX2
TNIP1
PRNP
FAM13B
CISD3
IFNGR1
ANTXR2
POM121
TMEM121B
DDX6
E2F2
FABP6
TSPAN32
C11orf21
CAMKK1
LYSMD2
FBXO31
KAZALD1
PIKFYVE
LOC100289561
DCTN4
HCRT
TIGD6
HMGXB3
TNNI2
SPHK1
FKBP5
ANP32E
KIF21B
CCPG1
C15orf65
SLC17A9
ST3GAL1
PLEKHG3
UNC93B1
CDCA4
DAP
CSK
EVL
TMPO
SQSTM1
FASTKD1
C11orf24
FTH1
GSR
MGAT4B
ZNRD2
FAM89B
EHBP1L1
TBL2
MALL
PCTP
NLRP3
MOB2
CPT1A
BPI
TLR9
MEF2C
ETHE1
TANK
IGF2BP3
RHBDF1
MPG
CLIC4
ACKR2
MICAL1
SPDYE21
MEF2D
FAM110A
LGALS1
ADGRE2
FOS
C5AR2
NGFR
MAP2K3
SNRPA
C19orf54
SERPINB1
ARSG
ZNF438
TATDN1
NDUFB9
SMARCD2
POLDIP3
LMBR1
LRRC25
NOL4L
RIOK3
RRM2B
KSR1
DOCK10
UBE2J1
OAS2
PRAM1
BCL2L13
RBAK-RBAKDN
RBAK
CPQ
CITED4
RUFY1
PXT1
KCTD20
LSP1
AGAP3
CRTAP
ARHGAP9
FCRL6
RASSF5
TNFSF9
IRF5
LFNG
C3orf86
TGM5
TUBB3
SDE2
MC1R
DNAJC16
CASP9
TNFRSF10C
FES
BRI3BP
PNISR
ITPKA
CLDN9
ABCA7
FHAD1
SASH3
AGTPBP1
ESRRA
CATSPERZ
IKZF1
BEGAIN
SYTL3
SH2D3C
CDK9
IL17RE
HOXA3
BRI3
TGFBR2
FOXN1
RIPOR1
ARID5A
GNB2
PPM1L
SYPL1
SLCO4C1
PDP2
LRCH4
FBXO24
FAM219A
DNAI1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
FXYD2
IL16
RARG
PKN1
GNAI2
VPS9D1
EIF4E3
SV2A
NOD2
RRP12
GSN
NCOA4
ZMYND10
RASSF1
NT5C2
ERCC1
FSTL3
SBF1
LRFN2
SYNCRIP
NBR1
MAP3K2
SLC9A3R1
DYRK1A
SPATA25
SERPINF1
ZSWIM1
LAT
MRPS23
INTS5
CFAP92
MEFV
LAIR2
AURKAIP1
NUP210
PXN
ARHGAP25
S100A8
PPP6R1
ACTR3
SRSF3
TRAF4
IFITM2
ONECUT3
INPP5B
EMC8
COX4I1
OAF
CAPN2
UBE2R2
ARRB2
ANKRD61
SPG21
SIRPA
IRF2BP2
MTOR
CLN6
NCF4
SHH
INTS10
UNCX
EML2
MYOM2
AVPR2
BCAN
BABAM2
RBKS
LONRF3
ACOX2
ADRB2
CBL
KLHL30
RNF139
A2M
CD244
CBX4
CTSG
TUBGCP3
TRIM55
ITPRIPL2
CDT1
CLDN12
RAB27B
UFSP1
KLF3
ACYP1
ZC2HC1C
AK2
TOB1
PCMTD1
H4C9
ZNF385A
MAP3K7CL
SLC2A5
RAPGEF1
CCNT1
SMOX
NUDT16L1
CD46
MYO1F
TBATA
MARCHF3
CCDC182
SYT12
STOM
GRK6
CUEDC2
TTC16
PTRH1
GLS
CFAP157
RHOF
OAZ1
SEMA4B
SLC48A1
SELPLG
PCGF3
MED11
ZMYND15
CXCL16
ZSCAN10
TFF3
FBRSL1
KMT2E
ATG5
CD55
SLC6A6
SLCO3A1
TM6SF1
RBM15
CLDND2
NKG7
NEK6
TDRD3
HBEGF
GRK2
MGAT1
TCTA
RHOA
TRIM38
NPAS4
ATG9A
ANKZF1
C12orf73
ARL4A
POM121C
TBC1D4
RELT
MFSD2A
EPHB6
LDB1
CAPN14
C20orf203
ZNF319
USB1
NR2C1
RFFL
HPD
PSMD9
CTSZ
ZNF718
PRDM10
EPM2A
NFATC2
SH2B3
PEAK3
EIF4EBP3
PTEN
KLLN
ZNF212
BNC2
RHOBTB1
SH3TC1
TNFAIP8L1
GBE1
PLK3
SCUBE1
CXorf58
IL12RB1
MDGA1
EFCC1
H4C15
H4C14
MGST2
TEX9
RFX7
ZMYM4
SIGLEC12
PPP1R15A
RAET1E
ACAP1
MARCO
LPIN1
SLAMF1
GSTO1
ITGA5
RPH3AL
DOK3
CDON
PIGL
NCOR1
NDRG2
SREBF2
ARHGEF40
GSDMD
SYF2
FAM89A
PKN2
C8orf37
CNPY3
MFNG
MROH6
NAPRT
VOPP1
ATAD2B
OTUB1
IKBKB
RUNX3
MAFG
SIRT7
SMIM33
TMEM273
MIDN
WDR81
CARD19
PDSS2
FXR1
STK3
NUDT4B
ZNF76
RMND1
ARMT1
M6PR
KLRG1
MTMR11
RASD2
CYB561
TFAP2E
ZSCAN2
KLHL5
ZC3H12A
SLC1A4
SNX3
UNKL
NECTIN2
CCRL2
SMPD1
ZFAND3
MOB1A
PLEKHO1
MYO1A
CCR5
TNFAIP2
ZFYVE16
SLC15A3
ZBTB47
COX5A
CYBA
CUEDC1
CLPX
MX2
TNFSF13
SENP3
GPR42
RBBP5
SLC66A1
AKR7A2
LRG1
PLIN5
PACC1
PDS5A
BSDC1
RPS6KA2
MRPS31
TACC1
ZCCHC3
ATP11A
WHAMM
FSD2
LDLRAD4
SHISA5
ZBTB43
ATP2A3
DUSP3
CFAP97D1
RCSD1
PSMB10
CTRL
RNASE1
PIGV
XPO1
MPO
TIMP2
LRP5L
HEBP2
SCAF1
RRAS
ZCCHC24
LCE3A
TPM3
STK10
CTRC
TSNAX
C1GALT1
DMWD
MGA
FIGNL2
WNT10A
IFI16
GPR150
KMT5A
PTK2
MTRNR2L2
MSH3
DHFR
NDUFS7
MFSD10
STAT3
ST20-MTHFS
ATP2B4
SHF
LTF
CLUH
ZYX
FAM131B
MTRNR2L8
SNX1
CIAO2A
NAMPT
HOXC12
PLEKHG1
IL1R1
SEC24A
PLP2
GPR146
THEMIS2
MAGIX
SIGLEC6
ZNF554
PTTG1IP
ARL6IP5
UBA3
IL21R
SLC4A8
GALNT6
SNX14
ZFP64
KCNQ5
IGLL5
EXTL1
SDR39U1
ICAM5
ICAM4
PTER
EMID1
LRRFIP1
TENT5C
YAF2
JAML
MREG
GNG2
ADA2
IDH1
LSM4
LOC388282
DCSTAMP
THAP11
NUTF2
CENPT
HSP90AA1
MSL2
RBM15B
SHC3
TUBB
LYL1
MDC1
USP49
PPIAL4H
SIRPB1
FAM107B
SLC11A2
RPLP1
SNX15
MBP
SLC23A2
GRAMD4
MTO1
UMODL1
MKNK2
APOM
BAG6
HES1
FERMT3
TGFBR1
KLF2
IGFBP6
SMAD3
ATP2A2
CST7
MMP14
MFAP4
TBC1D10C
PPP1CA
SKAP2
KRI1
CDKN2D
TOMM40
SSTR4
GRHL3
COPS7A
FAM184A
ITCH