ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17639400 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◣ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

MTRNR2L8
MTRNR2L1
PDE6B
ZGPAT
ARFRP1
NFE2
MTRNR2L2
MSH3
DHFR
IER3
FLOT1
BABAM2
RBKS
COL23A1
PRAM1
CCDC88B
LAPTM5
SKIL
INAVA
SMIM20
KAT6B
RASGRP2
DUX4
PCNA
CDS2
STX1A
ICAM1
ZNF746
UPF3A
C16orf54
NR2C2
FRG2C
MEF2D
ANKMY1
RNPEPL1
ZNF740
CSAD
KANSL3
FER1L5
ARHGAP4
ARHGEF18
MRPS31
ARID3B
CCNDBP1
FTL
SERPINB1
CXXC5
NDUFA4
ERCC1
LIMK1
PPCDC
RNF166
RARG
PITPNM2
SMG6
NCOA4
FRG2
KEAP1
AGTRAP
ZNF414
SPDYE13
MYEOV
MTG1
SERTAD2
SCAP
ANPEP
CEBPE
GH1
SRCAP
LOC730183
ZGLP1
HUS1
NR2C1
LPCAT3
MYRF
USP37
CNOT9
GDPGP1
CIB1
TXNDC11
DNAJC16
CASP9
MDM2
DZIP3
CIP2A
ASB2
MAP3K8
PARP2
PICALM
DENND6A
MBD6
DDIT3
DNAJB2
CCDC114
EMP3
SREBF1
COX5A
MYO1G
MRPL4
CTCF
ANKRD18B
ZNF217
PLIN2
SHISAL2A
TRPM2
MTRF1L
YARS1
S100PBP
MPC1
TMEM182
MFSD9
RASSF2
OPRL1
LKAAEAR1
PDE4B
SOD2
WTAP
CXCR4
SEC14L1
SLC35C1
ARL4A
CCL2
PPP1R27
MCRIP1
PPP3CB
MED9
GTPBP6
TRIM8
MACROH2A1
RAB3D
SBF1
MAP1LC3B2
KAZALD1
TYROBP
ING1
SEPTIN2
HDLBP
CD38
IPPK
STX18
ADAM17
DRC7
KRI1
CDKN2D
KMT5A
PKM
BHLHE40
ACACA
MFN2
ZNRD2
FAM89B
EHBP1L1
NAMPT
MAP2K3
SH2B3
NCOA2
EPM2A
GPR35
RPS6KA1
SPAAR
GFOD1
NIBAN3
RARB
CCDC200
NOL4L
HRH1
FARSA
CALR
MTHFR
CLCN6
SYTL1
FAR2
BAZ1B
THAP11
NUTF2
CENPT
CYP2E1
RAP1GAP2
GSG1
CNOT2
SLC25A19
CYB5R4
GPATCH8
CBFA2T3
IDH1
HPCAL1
SPATA1
GNG5
PRELID3B
GALNT9
SH2B1
TOX2
RNF149
PDSS2
IGFBP6
SOAT2
CYTH4
CDKN2AIP
MAPK8
ARID2
LYL1
MYADM
BOLA3
ICAM3
RBM7
C11orf71
ZC3H4
RNF103-CHMP3
RMND5A
SH3BP2
PIK3AP1
GYPC
SPATA25
NEURL2
CTSA
ANXA11
JUND
DNAJB1
WT1
OAZ1
MACC1
RNF168
NRL
DCAF11
BIN2
MYO18A
CLDND2
NKG7
UBE2R2
KRAS
ADPRHL1
ZNF595
SLC11A2
TAGLN2
TCTEX1D4
BTBD19
RNASEH1
TRIP10
GPR108
PA2G4
PHF19
AP5B1
CD82
HES1
MIDN
TBL1XR1
ADGRG5
UPP1
CTBP2
SDE2
VPS37C
SMARCD2
ADIPOR2
AP1B1
DDX5
SLC4A2
CDK5
ICAM5
ICAM4
MINDY2
SPIN1
AZIN1
BAG2
LMBRD1
LOC114841035
FKBP2
CCDC102A
MID1IP1
ZCCHC24
RARA
BCL3
PGLS
NOTCH2NLA
FIGNL1
PDCD4
NPBWR2
PTEN
KLLN
CENPH
BCAP29
SLC20A1
LIPA
POM121
AARS2
MRPL2
KLC4
CYP4V2
ZC3H6
FMNL1
ZSWIM9
LIG1
FAM200B
GSPT1
IQUB
QPRT
ROM1
EML3
ARSG
SSBP4
IGF2BP3
FAM83E
SPHK2
RPL18
BCAT1
ZNF114
LMBR1
STING1
ACTL9
CNR2
AP2S1
PXYLP1
VSIR
PPP1R18
TRAK2
STRADB
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
POLR2E
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
ATP5MG
SLC35B1
STAM
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
ZRANB2
TTC8
GOLGA5
SUPV3L1
IQCG
DPH6
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
PCBP1
PDAP1
BUD31
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
LRR1
NEUROG3
PTGES2
PIN4
OR6B2
NDUFA10
SUCLG1
OAZ3
MRPL9
UBE2I
HES3
PDE12
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
HOXA4
CDX2
SPATC1L
CYP26A1
VEZT
FGD6
FZD8
SEC11C
EIF2S3
GADD45GIP1
RPL7
RDH10
BICRA
SYBU
HOXA3
CDC73
PMAIP1
ID2
SP2
TMEM107
ARHGAP10
C16orf91
RPN1
NDUFS7
GTF3C4
DDX31
DHRS3
ZP4
GORAB
NEUROG1
ATOH1
NEUROD1
CNPY2
DPP9
BNIP3
TLE3
ZNF383
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
TLE4
DNAJB7
MRPL38
SPCS1
GLT8D1
H2AW
PHOX2B
TTI2
PDHX
APIP
WDR74
HOXA2
ST18
HOXA1
TBX3
LIN28A
INSM1
DUSP6
PCGF1
LBX2
CCDC33
CDCA7L
METTL24
TEPSIN
NDUFAF8
ERRFI1
PCBD2
DNM2
FGF19
TPRA1
FOXP1
ANKLE2
HOXB3
ALKBH5
P4HB
RUNX1T1
TBX2
FBXO31
NPAS4
MLEC
HPD
PRUNE2
TNFRSF19
CS
ANKRD28
DLL4
RPS10-NUDT3
RPS10
SP5
TMEM70
ELOC
PDE4D
PDHB
SYNPO
AXDND1
SMAD3
MRPL34
DAPL1
CLGN
LPIN1
ARHGEF28
CAMTA1
RAB5B
ID3
TMEM120B
KIF21B
DCTN3
DLX4
TLE1
XKR7
ZFHX3
RXRB
PHC2
DONSON
DOLPP1
ARID3C
ARRDC4
ANK2
RPS24
POLR3A
HOXC4
PGK1
SLC39A7
HSPA1B
CBFA2T2
ATF6
RBPJ
MSX1
OTUD7B
SIRT4
CCN1
NELFA
MFSD10
PRRX1
KDM6B
KATNB1
PANK2
SMPDL3A
SQSTM1
LZTS1
TMEM101
TRIB1
CCDC174
BAIAP2
PDZRN3
FRA10AC1
PPP6R3
ABHD2
ABCC10
NINJ2
ZNF687
POP5
RFX1
CLCN3
MYLK4
NR2F1
MTMR4
GATA4
GPCPD1
ID1
USP17L20
ZFHX4
SRSF11
ZNF367
PCGF2
NBPF1
KCNAB2
TOP2A
KDM2B
CCNL2
PSPN
ALKBH7
ANKHD1-EIF4EBP3
ANKHD1
LRRC40
NUBP1
SACM1L
ADAP1
USP17L22
DYNLT1
ITGAV
FOXP2
FURIN
NFKBIA
MIDEAS
TLE2
IQSEC3
POLDIP3
NR2F6
HEXIM2
CNTN1
RASSF5
SP1
PKDCC
ZFAND2A
ZNF608
OSBP
NLK
ABHD8
STIP1
EIF2AK3
RNF207
DLG2
CSF3R
RHBDD1
HMGCS1
AHDC1
LRATD2
ATP5F1B
GADD45G
SLC45A4
HNRNPA2B1
CBX3
PSMD6
RAB11B
KNL1
RBBP7
AGO1
G3BP1
EVI5L
CITED2
KDM8
DSCAML1
RTN4
TRAF7
JUP
PRDM10
DDA1
HNRNPD
MALRD1
GPC6
POLG
FAM107B
MEIS2
SLC7A5
DLC1
CRLS1
GRSF1
SOCS3
B4GAT1
TRIM46
LIG3
EVA1A
MYRIP
MTF2
SHF
METTL11B
RGS12
RBFOX2
PLEKHG2
SPG7
ARHGAP24
TPCN1
SEPTIN9
CCL26
GLRX5
ANTKMT
PKN2
FST
DAGLB
SLC6A12
LCK
FAM167B
GADD45A
CBX5
TMEM94
BAHCC1
SEC22B
CCDC43
RGS3
ARAP1
KDM3A
ZFP36
BFSP1
NCDN
KIAA0319L
PRMT5
NEK3
EIF3D
ATP6V1E2
TLN1
SLC30A4
CREB3
STAP2
ACYP1
SH3YL1
ACP1
H3C12
H2BC17
H2AC17
ABCA4
DIABLO
FGR
ADM
ZBTB18
MRPS28
PLEC
CYP51A1
RAB37
SERPINE1
SNCG
MMRN2
HOXC6
LRCH4
FBXO24
RHOQ
CACNA1D
GMEB2
TCF7L2
HMGB1
CEP41
CIC
FRMD3
HNMT
ARID5A
CAPNS2
UGP2
CNKSR3
KMT2A
NKD1
CPT1A
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ROGDI
DNAJB3
LTBR
KIAA0319
BRMS1
MRPS24
TRDMT1
SYNJ2
ARHGEF10L
HOXC5
TES
PHETA1
KCTD7
EFEMP2
LNPEP
RAC1
INSM2
EIF4H
HOXB1
CSRNP1
MBD2
CMSS1
USP42
INAFM2
ARID4A
ANKRD1
DUSP9
ILF2
LFNG
PNKD
LIMA1
ARL8A
IFI16
PLAGL1
TDRKH
TUBB4B
TXNRD1
HTR5A
AIFM2
EVPL
SYTL3
HIBADH
DMBX1
CERK
IKBKB
LMNA
ZNF76
LUC7L2
LRP5L
GTF3A
PRKACA
UBE2F
LAMP1
SORBS2
NRSN2
MSX2
KLHDC2
MT2A
IL6R
NRM
HOXB4
SLC35A3
RAI14
COMTD1
IQGAP2
CFL1
C12orf73
TIGD1
EIF4E2
CPSF4L
TUBGCP3
CDK6
VOPP1
RBM15
SH2D6
UACA
ZNF77
CCDC88A
RNF34
USPL1
NRCAM
NEDD9
GSTP1
CR1L
NRXN1
TRABD2B
LRIG1
IRF9
PIKFYVE
PIGV
ZNF3
H6PD
GOT1
TBL1X
PAX6
TMEM60
PHTF2
ZDHHC4
EIF1B
CCL16
E4F1
ANKS4B
CBX4
NANP
USP3
KCNH7
PRDM12
TF
METRN
DCAF7
NKIRAS1
CHD8
KLF6
TRAF4
WDR97
MAF1
NCOA7
ORMDL3
CRKL
SEMA5B
OPRM1
POLR3E
TUBB
INHBE
NKX1-1
GPAA1
EXOSC4
YTHDF2
ZNF827
MARCHF3
STX16
ATP2B2
RNF144A
CASC3
CLK1
PC
ATG16L1
ERI3
SMIM11B
SMIM11A
TRIM7
CDC42EP3
RXRA
TSPAN4
POLR2L
NFE2L1
NCBP2AS2
NCBP2
ENO1
SRSF2
MFSD11
KPNA4
UGT1A1
FAAP24
CEP89
IRS1
GSN
PCTP
PARK7
HECTD4
UNC13D
ATP5MC1
TRAF2
PLEKHF2
TACC1
TCHP
L1CAM
ANP32E
CELSR3
MPND
ACVR1
PXMP4
TTC30B
GPT2
GGT1
NEO1
SH3BP4
HSP90B1
C14orf93
ZC2HC1C
SULF1
ETV4
PAQR8
DUSP12
UBE2C
DGKZ
RHBG
DDX1
ETFBKMT
CALM2
GBA
BRWD1
RTBDN
DBX1
LMO4
FAM24A
HNRNPC
TMC6
TANK
RAB17
LASP1
FLAD1
ZCWPW1
TMTC4
SLC25A6
MEPCE
ALDH4A1
ATP23
MPV17L2
IL6ST
MAP1LC3B
ABLIM3
UBXN10