ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144542 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◣ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

OSGIN1
GSDMD
DENND3
NCF1
RBFOX3
INKA1
CDHR4
UBA7
DUX4
DHX16
PPP1R18
NRM
PLEC
CLIP3
SH2D3A
VAV1
PRAM1
GTPBP6
LYL1
NFE2
RNF166
CTU2
LGR6
IAH1
DRC7
FABP6
TNFRSF1A
LHX6
UBE4A
CYB561
HNRNPF
TNK2
HACL1
BTD
TBKBP1
CSF1R
RGS19
OPRL1
LKAAEAR1
YIF1B
KCNK6
LAMB3
VASP
TMEM275
ELOA2
SLC9A3R1
RAB37
ZNF696
UHRF1
CPXM1
DCAF10
MPPE1
TMC8
TMC6
OLFML2A
DYRK1A
MTRNR2L1
MEF2C
EVPL
RHPN1
STX10
IER2
AGTRAP
SLC22A16
INTS12
GSTCD
SMG8
DUSP7
ARHGAP25
CCL3
CCL3L3
CCL3L1
FRA10AC1
GNAI2
CASS4
NFE2L2
ADAMTS15
DGCR6L
UCN3
STK32B
RXRA
RPS6KA1
SEC14L1
LPIN1
PADI4
FMNL1
NBEAL2
CCDC12
SLC38A10
C3orf86
CRYAA2
CRYAA
TYROBP
NFKBID
HCST
KLF2
CD300A
SARAF
LEPROTL1
CLEC5A
EAPP
TMEM104
NAT9
TIMP2
GALNT7
HHEX
DUS1L
IREB2
HBEGF
GSX2
DPY19L4
F11R
CEP295NL
ARSG
SLC16A6
PDE6B
GPAA1
EXOSC4
BCL3
NINJ2
TMEM45B
HM13
NKX6-3
EPHA8
MYO18A
CD33
TPM4
FAM180B
TPM3
C1QTNF4
EMILIN1
OST4
KHK
RASAL3
SPINK8
MTRNR2L2
MSH3
DHFR
SH2D3C
CDK9
KCNK9
HPN
SFTPD
TMCC2
CACNG4
EGFL7
NDST2
NTMT1
ANXA6
EXT1
CCDC149
FAM107B
ENG
DMAP1
S100A8
MMP9
WDR74
STX5
TMED9
B4GALT7
NAA10
ARHGAP4
GRIFIN
SCAMP2
NFATC3
RAPGEF1
ZNF562
KRT17
SIPA1
ABT1
ZNF792
SDE2
MAP1S
IL17RE
GATA2
DSTYK
LAPTM5
SUSD1
MTSS1
FKBP1A
SLC18A3
CHAT
CSF3R
PHC2
ZER1
PPIAL4G
MAMDC2
GRAMD4
ERLIN2
NIBAN3
C1orf159
FLI1
FERMT1
LTB
LST1
NCR3
SLC12A7
PRL
PLAUR
SHANK3
HIP1
STXBP5
NME1-NME2
NME1
RASSF2
KRT80
TNFAIP8L2
SCNM1
LYSMD1
DUSP22
NCF2
TACO1
POLD1
NR1H2
STK10
MUC6
KCTD12
ZNF620
AKR1A1
UBE2J1
PLXNA4
CSRP1
LHX1
SEPTIN9
DNAJC10
MAPK6
SIGLEC8
USP3
SH2B3
PHYKPL
TCTEX1D1
NDUFS7
PSD
FBXL15
SIRPB2
TFAP2E
ANKRD13D
PRODH2
ZNF207
C17orf75
PCNX3
MAP3K11
AUNIP
SAMD14
ID1
PGS1
TOX2
PPP1R9B
NSA2
GFM2
PPIAL4C
VPS18
GCNT1
ADA
HNF4A
CAMK2G
CTRC
INAFM1
OLIG1
WDFY3
FGGY
SRC
TCTEX1D4
BTBD19
PLK3
CRACR2A
RAB24
PRELID1
MXD3
USH1G
OTOP2
SEMA4B
ZNF384
TBC1D19
TACC1
PPP1R27
MCRIP1
PLEK
CIITA
NFILZ
NTNG2
LIMS1
TNFSF14
ACOT11
SERPINB9
BPIFA1
CTSD
FCMR
IFITM10
F2RL3
ZMIZ1
CXCL8
PLCXD1
ALDH8A1
TOR1AIP2
TOR1AIP1
SAMD4B
GMFG
CCL4L2
BMS1
CXCL1
SPN
ITGA9
FAM207A
SF3A3
FHL3
PSMC5
FTSJ3
IQUB
ITGB2
OR4D1
MLNR
C3
NFKB2
TEAD3
STING1
SMIM33
CELF2
SCN1B
FGF7
TOP3B
RHOF
CEP112
STARD8
ELMO1
IKBKE
UNCX
USP15
CYRIB
STXBP4
COX11
RNF220
RBM47
CDYL
TMEM72
TFF3
NDUFS3
KBTBD4
ZNF595
POMP
SBK3
SBK2
STX16
RPS19
MAN2C1
GRPEL2
CYTH4
NAPRT
MROH6
STAB1
CNPY1
APLNR
EIF1AD
CST6
BANF1
CD82
TMEM154
KCNIP2
NMNAT1
LZIC
IL16
S100Z
VWA3B
CALML4
CNPY3
RHBDF2
LAMB4
PTPN6
C12orf57
NFXL1
GRB2
CCDC170
TMEM242
TUBB3
MC1R
TBXA2R
GALNT9
CCAR2
C8orf58
SAR1B
MYO1G
COG1
ARHGAP30
MPO
AATK
INPP5B
ACBD5
MILR1
SIRT4
SLC39A4
CPSF1
ADAP1
UNC13D
DLK1
VAMP1
TAPBPL
IGFBP4
LMO2
SAMD11
LUZP1
CHST13
FOXI1
GMCL2
UNC5A
STAT1
ACY3
JRK
LMBR1
ASPSCR1
SENP6
ARAP1
SLC43A3
ARL5C
CD300C
PSCA
GTF2H2C
GTF2H2
MITD1
EPS15
RASA4B
TMIE
ALS2CL
SCML4
DDX1
CXCR5
IL6R
FASLG
ZNF467
CHSY1
GNAI3
RCSD1
C20orf203
GAS2L1
PGLYRP4
APOBEC1
NAIP
S100A9
CEACAM4
TPD52L2
RPS14
SNUPN
ADAM10
MLXIP
PPIAL4F
PPIAL4E
PPIAL4D
GLRX
EPHA1
STAT6
HDGF
MRPL24
GABPB1
GALK2
ANKRD17
COPS2
MTPN
LUZP6
JAG2
NUP210
LIMD2
NUDT14
MYEOV
TPD52
DENND10
RASGRP2
KCNN4
MAVS
SH2D4B
P2RY8
LILRA2
IDI1
SYCE2
PDXK
SPOP
CBFA2T3
LOXL2
SIAH3
CRYBB2
PPP1CA
CCZ1B
DGKZ
PHF20
TBC1D10C
DUSP3
CFAP97D1
AP3S2
ZNF852
GRAMD1C
SYTL1
PPIAL4A
SLCO2B1
SIGLECL1
CBX2
CDK3
FFAR1
FFAR3
TM4SF18
USP30
PSMF1
PNRC1
SYNJ2
ZFP64
PPFIBP2
LINGO1
LAT2
PADI1
NLRP3
TTC4
CBWD1
KIAA0895L
EXOC3L1
E2F4
RFX2
ELMO3
TMIGD2
FSD1
SQSTM1
DENND4B
COX16
TLR1
TTLL8
ZNF408
ARHGAP1
APPL2
TNFSF9
DHRS12
MCTP1
LRP3
SLC22A13
PNRC2
SCGB1C2
DUSP6
CCL19
LSM4
B4GALT3
HIGD2B
BBS4
ITGA5
SULT1B1
TAF12
NDUFB8
HIF1AN
XRN2
NFRKB
LTB4R2
XCL2
LTB4R
CIDEB
CALR
RAD23A
FARSA
UBAP1
ARHGEF2
PIK3CG
ACADS
UNC119B
CD1C
ST3GAL1
RGL4
PLXND1
RPS5
GTF2H2C_2
RAD54L2
ACTB
GNA15
ARPC3
ETHE1
ZNF575
RSU1
FCAMR
IGF2
THUMPD3
ALS2
RNASET2
SLCO2A1
RUNX2
TM6SF1
ARHGEF12
MYL12A
CEBPD
NCF4
SYNE3
ADRA2A
CRISPLD2
LAIR1
KBTBD2
IRAK3
NLRP2
GHRL
PEX3
ADAT2
SDHAF2
CPSF7
TMA16
TSPOAP1
FCGR1A
TP53I11
FAM166A
STPG3
SNAP47
JMJD4
KIF5C
TM9SF1
IPO4
SDF4
B3GALT6
TRIB1
NELFB
TMEM184A
LOC112694756
IQSEC1
TNFRSF4
PPP1R16B
SEPTIN8
TLCD3B
SLA
ATP2A3
CACNA2D4
DLX4
P2RX1
SUPT20HL1
SLC39A3
RHOG
PSTPIP1
CHRM3
LIMS4
LIMS3
FAM227B
DTWD1
ATG16L2
TLK1
BIN1
GNG7
HRCT1
SPAAR
LOC102724770
DGCR6
SNRPD3
GUCD1
MTIF2
HNRNPA1L2
NEDD9
GPR68
PARVB
GIMAP1-GIMAP5
GIMAP1
CAMK2N1
PDE6H
TTR
LRRC59
GTF3C3
C2orf66
SDCCAG8
CEP170
AAR2
YWHAB
SEC22B
RARA
RGCC
CEBPE
CASC3
PRRC2A
AIF1
PLEKHN1
KLHL17
TM7SF3
MED21
TTC32
USP24
ST8SIA4
ARC
CLCA2
GGT5
TSSC4
NABP1
ASAP1
SKI
IPCEF1
CCN4
TMEM41A
TMOD4
CDK5RAP1
TSPAN31
AGAP2
FKBP5
NOXA1
RNF149
ANXA11
METRNL
AK1
CABLES1
SNX10
LPCAT2
POU3F2
DCAF12
TRAF3IP3
ADGRE1
OR4K3
OR4K2
DNAJC25-GNG10
DNAJC25
MTA2
TUT1
CHCHD5
ATP6V0E2
NEK6
ATP11A
TMIGD3
ADORA3
CXCL2
CALML5
ALKBH3
SLX1B
SLX1A
BOLA2B
BOLA2
MTMR9
CORO1A
MRPL1
TMEM123
CAPZB
GNPDA1
SERPINA1
ANKRD33
MRPL58
CALHM3
IPPK
PSMC2
DNAJC2
KDR
GAPT
AURKAIP1
TEKT2
ADPRS
UBXN8
ZNF622
RORC
HPCAL1
NOS3
INPP5D
PPARGC1A
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
C1QTNF1
ADRA1A
ONECUT3
TMEM262
ATP6V0A1
YES1
ADAM8
GPR88
SHISA7
CD300E
NEFL
MAF1
CYC1
WDR97
PRR5L
STMN3
RTEL1
TTI2
URM1
RASSF5
ZYX
FAM131B
STAP1
PRR5
RAC2
DOK4
HOPX
LYG2
POLR2E
GPX4
KIF2C
GSTO1
ITPRIP
MRPL23
BID
TBC1D16
EMC3
NGFR
CAMP
HACE1
ADAMTSL4
CLTC
H4C12
H4C11
H2BC15
H2AC15
CENPC
KIAA0930
PIGV
PRKAA1
WNT7B
BPI
MS4A3
CLEC4O
GBP3
SLC39A13
SH3BP2
ROPN1L
SLC66A1
AKR7A2
TGIF2-RAB5IF
TGIF2
SSBP4
ITGA3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
WDR36
CMTM7
NLRP12
NOL4L
FERMT3
DCP1A
ZNF391
ZC3HAV1
PHF2
PTTG1IP
SUN2
CRYBG1
ZP3
OSM
NR1I2
GALNT3
VSX1
ACSS1
GRK2
LPCAT1
UBE2V1
USP32
ULK4
MAP1LC3B2
TXLNB
SEMA6B
TTI1
RPRD1B
SCNN1A
LTBR
MLEC
RPL19
CACNB1
NT5C2
LRRC37B
ZDHHC18
PDE4D
IFITM1
IFITM2
IFITM5
TRAF7
ZNF805
AURKC
LYRM1
NADSYN1
DHCR7
EVL
TBX10
TNFAIP2
EFHD2
SEC14L5
SH3PXD2A
TRPM6
SLC13A5
CD2
PLAC1
TRIP4
PCLAF
ZFYVE28
CFAP99
MRTFA
NOP16
HIGD2A
ZNF784
GPR61
ARHGEF3
MAP3K8
SPTBN1
PLCB2
TPRKB
SLC12A6
PMVK
SUPT7L
SLC4A1AP
NUTM1
NOP10
PIM1
GSN
LDB1
ARHGDIB
ADA2
NUP210L
NOL12
ANXA2R
VPS26A
STIM1
CSNK1G2
PVALEF
CRB2
SSBP1
STXBP2
WDR11
PCP2
MRPL40
HIRA
SNRPB
ADRM1
CARD8
NR3C1
CFLAR
ARMC7
CYTH3
NFAM1
KLHL6
SMPDL3B
CLEC4E
BRF2
INKA2
PAG1
CHST12
SHANK1
CLEC11A
MS4A15
ALG10B
MYBPC3
SGTA
THOP1
PTPRG
RAB3IL1
STX18
TEPSIN
NDUFAF8
FAM228B
TP53I3
SF3B6
CEP131
INTS4
ZNF787
TNIP1
BHLHE40
BSG
BTBD1
PEAK3
PLEKHO1
UNC5B
RASGEF1A
EGR3
BEST1
C5AR1
AVIL
YIPF7
NRROS
SMG7
SYTL3
TANK
LARP1
RASA4
TLCD5
CABP1
RGS14
LMAN2
ATN1
ZMPSTE24
PRRC2B
TTYH2
TRABD
ETV6
LYSMD2
FGFBP3
SERPINB6
ORAI1
CYP2E1
ENO2
TMOD2
APBB1IP
SIGLEC9
ARL14EPL
NUF2
MDM4
RPS7
ARHGEF18
GATD3B
GATD3A
ABTB1
UBE2L6
CTSG
GOLGA7B
MS4A7
RAB44
MTRNR2L8
DR1
ANKRD40
MALT1