ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14127544 | OCI-AML3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◣ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DUX4
H4C12
H4C11
H2BC15
H2AC15
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
H2BC21
H2AC21
H2AC20
H2BC14
H2AC14
EGR1
H1-2
H3C3
FOS
H3C13
H2BC18
TSPOAP1
H4C9
H2BC12
H2AC12
H2BC11
H2AC11
H2BC5
H1-4
H4C13
H3C11
H2AC16
H1-5
CD68
EIF4A1
LOC100996842
MPDU1
MCL1
H4C2
H3C2
H2AC4
H4C1
POLG2
DDX5
TEDC1
CRIP1
CRIP2
SRSF7
H2BC4
H2AC6
CKS2
SECISBP2
PTMA
FOSB
H4C8
H3C6
H2BC8
H2AC8
MAMDC2
H2BC17
H2AC17
H3C12
H4C6
H1-3
H4C7
H3C7
H2BC9
ASB13
ATF4
DDX3X
TRA2B
MDM4
PPARA
H3C10
H2BC13
H2AC13
H4C3
H1-6
EEF1A1
EIF1
KLF7
TUBA1B
H3C4
H2AC7
H4C5
H2BC7
TAF12
TPI1
SPSB2
UNK
H3-3B
ACTB
PPIA
NRIP1
UBC
GPS2
EIF5A
ZBTB37
DDX21
CA2
MAT2A
ZBTB4
SLC35G6
POLR2A
CALM2
TMSB4X
GAPDH
BBC3
NPM1
JUND
IQCN
SFPQ
NUCKS1
MTHFD2
SRSF2
MFSD11
METTL23
JMJD6
FUS
MRPS18B
ATAT1
H2BU1
H2AW
HNRNPA2B1
CBX3
GPX1
SLC39A10
FRG2C
H3C1
H1-1
H4C4
H2BC6
VIM
UBAP2L
C1orf43
TAF1D
C11orf54
RCC1
FADD
FTL
EAPP
HNRNPU
PABPC1
ANP32E
ZFP36L2
EFCAB2
ZFP36
PLEKHG2
STX10
IER2
SLC38A2
RRP12
HNRNPA3
PRDX2
JUNB
HSPA8
HMGN2
HNRNPH1
PHRF1
ANP32B
EIF4A2
HIPK3
ZNFX1
TUBA1C
NEK8
RPL23A
RAB34
TLCD1
PROCA1
SLC3A2
ANKRD13D
SUB1
CXCL8
RFX1
ADPGK
EEF2
POLDIP3
HNRNPF
WDR74
STX5
ZNF517
ZNF34
RPL8
SRSF6
TFRC
XBP1
ART1
ENO1
SRSF3
COL23A1
NCL
N4BP2
CITED2
KMT2E
SRSF5
CIRBP
FAM174C
NFYC
ELMO2
GABPB1
P4HB
RPS2
RNF151
TBL3
NDUFB10
RPL3L
RPSA
C19orf48
BCLAF1
PMAIP1
LTB
TNF
LTA
EIF5
RPL10
ZCWPW2
AZI2
PPIF
OAT
HNRNPAB
PARP16
CNBP
RPLP0
GCN1
TRIB1
PRDX1
UCK2
RPS20
RPS19
FRG2
RPS11
RPL13A
RMI1
HNRNPK
YWHAZ
MBNL1
ODC1
SLC25A11
RNF167
PFN1
ENO3
TRAF7
RAB26
LDHA
SF1
H2BS1
UBE2S
ATAD2
MUS81
CFL1
TANK
TAGLN2
GAS8
PNP
PIP4P1
NFE2L2
PCF11
PSEN1
ACTRT3
MYNN
TMBIM4
CXCL1
YBX1
RPL21
GTF2A1
BTG1
SLC16A3
NDUFAF3
IMPDH2
DALRD3
PCBP2
ETF1
APTX
DNAJA1
KLF6
GSTA4
LUC7L2
EIF4G1
SUPT5H
RPS16
PDCD4
SNX5
MGME1
HNRNPD
SIRT4
LRTM2
WDR43
H3-2
IRF2BP2
RPS23
ATP6AP1L
THBS3
MTX1
SLC7A1
PLEKHA4
PPP1R15A
PCIF1
JPT1
PTPN6
C12orf57
RPL12
LRSAM1
MATR3
NFKBIZ
HSP90AB1
SLC35B2
CLK1
NKIRAS1
RPL15
KPNA2
RHEB
TASL
KLF9
CBX5
HNRNPA1
ZNF217
TMEM267
INO80
COQ2
CCT5
ATPSCKMT
YWHAG
TEDDM1
GLUL
PBLD
HNRNPH3
FASN
PABPC4
REPIN1
SETD7
RPS8
PCBP1
CEBPA
CORO7-PAM16
CORO7
DNAJA3
C6orf62
HSPA4
EGR3
LRRC37A3
TPT1
THBD
E2F3
SRCAP
LOC730183
RPL22L1
LDLR
MARCHF6
EPC1
MTRNR2L8
HSP90AA1
RPL10A
RPL13
SLC7A5
HDGF
KLF2
H4-16
H2AJ
GTF2I
EIF4A3
DENND4B
CTBS
TLK2
GTF2IRD2B
GPCPD1
PTBP1
ZWILCH
SNAPC5
RPL4
IVNS1ABP
CITED4
HSH2D
AZIN1
CTCF
CCNL1
RPS13
NRROS
RAI1
UNKL
XPOT
RPL3
RPLP2
PNPLA2
PIDD1
RPS12
FRAT1
BHLHE40
RPL17-C18orf32
RPL17
C18orf32
RPL32
ARF4
RPL27A
ODF3B
TYMP
SCO2
ZC3H6
TMPO
NR4A2
DARS1
CYB561
UQCC3
LBHD1
CSKMT
C11orf98
ST7L
CAPZA1
BTF3
SPRED2
RPL37
CARD6
H2AX
DPAGT1
HMBS
NOP58
USP22
SLC25A6
CHMP2A
MPC2
DCAF6
UBE2M
RPS15A
YWHAE
IFRD1
ZC3H4
GPN3
FAM216A
HMGB2
TMEM187
HCFC1
SRGN
MUC3A
MORF4L1
LSM8
ZNF487
ZNF804A
ZBTB25
ZBTB1
PHB2
S100A13
S100A1
CHTOP
ISOC2
DLX1
CCNI
MYLIP
ETV6
MCM6
FABP5
FAM43A
GDI2
HNRNPDL
ENOPH1
PLPPR3
AZU1
RFX3
KIF2C
RXRA
ACTR2
JADE1
PKM
ZC3H10
RPL41
RPL31
PTP4A1
CCDC116
ENOSF1
ANTKMT
HAGHL
CCDC78
PRKAA1
UBE2D3
SRSF1
ASXL1
ARHGDIA
OPA1
NME2
PAN3
RPS6
RECQL4
LRRC14
MFSD3
GPT
SESN2
RNH1
SYNCRIP
MBP
HERPUD1
NDRG1
SPAG7
PRCC
CCT2
ALDOA
CDC42
GSG1
ACTR3
ATP2A2
TMEM167B
H2AZ1
DNAJB14
APOLD1
CDKN1B
DUSP2
ASTL
RAB13
RPS27
NASP
PUF60
CREBZF
SMARCC1
RCC2
SLC22A4
TOB1
LRPPRC
NUFIP2
TMEM190
TMEM238
RPL28
TARS1
JUN
DHRS9
ELK4
GTPBP4
TIGD5
EEF1D
STAG1
TNFSF9
ING3
ATAD2B
DUSP1
S100A11
LONRF1
TSC22D3
ID1
PRMT1
BPTF
NFKB1
TXNRD1
MID1IP1
FAM53C
CDC25C
TTC30B
ZNF207
C17orf75
RAB11FIP1
FTH1
ZNF787
RELT
ZNF335
PPP1R15B
SARAF
TMEM107
ZFAND5
ZNF783
HSP90B1
NDUFS1
EEF1B2
RBM3
SDE2
ERCC1
HSPA1B
DDX19B
AARS1
B2M
TOB2
HNRNPL
LYST
TIMP3
BCOR
RPL29
MARCHF7
DDX59
MAPK1IP1L
SERPINB1
MCM7
AP4M1
ERLIN2
ERCC6L2
PNN
TRAPPC6B
ARHGAP39
SCAF8
EBAG9
ZNF131
LRP8
OGFRL1
MEF2D
KDM6B
PPP4C
FMC1-LUC7L2
FMC1
CD164
TBC1D5
ANKRD18B
STAG2
STYXL1
ITGA4
CXCR4
RPS3
AMD1
SMARCE1
MICOS10-NBL1
MICOS10
EZH2
IL6R
LYN
BAZ2B
SNRPD1
EIF4G2
CHD1
HIPK1
FOXP1
KEAP1
KNTC1
PAIP1
BACH1
PPP2R2A
NXF1
ILF3
MDM2
INTS6
LRRC24
C8orf82
BTNL9
PPRC1
HSPE1-MOB4
HSPE1
HSPD1
SURF2
SURF1
RPL7A
MED22
GGNBP2
MYO19
RHBDD3
EWSR1
PNRC2
MKNK2
SNRPB
GTF3C6
EP300
WDR49
WDR1
ETS2
ST3GAL1
ID2
FNTA
ARIH1
CEBPB
RPLP1
KANSL1
USF1
TSTD1
ZBTB11
RPL24
RGL2
PFDN6
WDR46
SLTM
TMX4
HMGB1
TMEM70
ELOC
INO80D
TRIM27
SINHCAF
TRPM2
RPS26
PAF1
ING5
IL17RA
KIF27
DNAAF2
CFLAR
HEXIM2
STMN1
SLC19A1
ADIPOR2
GOLPH3
SLC25A13
KATNAL2
PIAS2
DDIT4
SRF
SRSF4
CDK12
PABPN1
ANXA2R
RHOF
SETD1B
ATG16L2
NIPBL
RBMX
PPP1R27
MCRIP1
LAT
SPNS1
POLR2J3
HSPA5
IPO7
EIF3A
CAPZA2
GADD45B
DOT1L
SETD5
CCDC85B
FOSL1
SLC25A33
NPEPL1
ZNF124
ATP6V0C
AMDHD2
TAF4
SNTB1
CDKN2C
LONP1
CATSPERD
RBM14-RBM4
RBM14
YTHDF3
NSMAF
TBL1XR1
DBI
C2orf76
PIGW
XPO6
RAN
H1-10
CYCS
TCERG1
PLIN5
LRG1
RPL35
ARPC5L
CAP1
WDR38
RNF169
LMNA
MIDEAS
RNF138
CENPA
RNASEH2B
OSBPL1A
CSDE1
PRDM15
HMGA1
HNRNPC
MAF1
CYC1
PHF19
SREBF1
BAZ1A
EIF3E
EDEM1
MICAL1
CDV3
CTNNB1
CEP350
EIF4E
RARA
DHX15
NCAPG
HSF1
BOP1
PRR22
DUS3L
PAK2
EIF4B
DYRK1A
NACA
COX20
NFIL3
GMEB1
RAB7A
SPRY2
OAZ1
WDR6
GRPEL1
YBX3
BANP
ANP32A
RRM2
ZAR1L
BRCA2
DNAJB4
FUBP1
CCL5
GPAA1
EXOSC4
RPL6
PTPN11
RPL5
ZCCHC3
C20orf96
FBXL17
IRF2BPL
BZW1
FIBP
SENP6
NAP1L1
LAPTM5
RPL18A
NOCT
KDM3B
DDX17
SMIM19
SLC20A2
C9orf40
MED31
C17orf100
ZNF22
ARHGAP26
FAIM
MRPL3
C15orf61
ZNF766
SPI1
AKAP8
HSPA9
RPS27A
CLHC1
LIG3
E2F5
INSIG1
MKI67
CPQ
CALM1
NUP153
GABPA
ATP5PF
RAD23B
ZNF24
TCTA
RHOA
ATP2B1
TXN
MNT
HNRNPUL1
ERAP1
CSNK1D
ARIH2
UHRF2
RLIM
LRIF1
CFD
ELANE
SERBP1
ZCWPW1
PPP1R35
MEPCE
ZMYND11
TIGD1
EIF4E2
RPL37A
STARD7
CTPS1
UAP1L1
MAN1B1
RPL7
RDH10
NNT
TALDO1
ME1
C16orf54
PPP3R1
NUDT19
ZEB2
KMT5B
NRF1
FAM83D
SBNO1
RBM12B
UBB
WDR4
SIK3
ZNF532
VCP
FANCG
RNPS1
GRB2
TUBB
MDC1
PLAC8
GNB1
IQGAP1
ADGRE5
NABP1
METTL26
COQ8A
RBM12
CPNE1
VMP1
PTRH2
WDR90
ZFX
SSBP4
SSU72
C5orf24
TADA3
ARPC4-TTLL3
ARPC4
SEC63
TASOR
UBXN1
DYNLL1
ELF2
LIN9
SRSF9
RUNX1
AHRR
PHF10
SMN2
SMN1
RNPEPL1
DUSP28
ANKMY1
SRRM2
FLT3
RASSF2
HNRNPR
ATL2
RPL23
GBE1
NAA10
ARHGAP4
ZBTB2
SLC22A15
CCDC57
TRA2A
NBN
SLC25A32
DCAF13
RPL34
HK2
NFKBIL1
DDX39B
ATP6V1G2
TRNT1
MCMBP
RACK1
TFAM
ZNRF2
TNFRSF10B
PCBD2
STAT1
MAN2C1
TFAP4
VEGFA
SUSD1
ARPC3
NAPEPLD
NR4A3
FERMT3
GART
DRAM1
FBXO41
EGR4
ADNP
GPD2
IKZF1
IDS
RPS3A
SFMBT2
CYREN
SLC25A28
ANKRD28
DDX23
MTF2
NAA80
IFRD2
HYAL3
LAMP1
CLTC
FEM1A
DSTYK
PDE6D
COPS7B
NOXO1
EIF2D
CHPF2
ABCF2
CALR3
C19orf44
NOTCH2NLC
STX18
TMEM41A
TIMM21
FBXO15
BRWD1
NCBP2AS2
NCBP2
MRPL21
IGHMBP2
CALCOCO1
DCP1A
UCKL1
TSNAXIP1
PAFAH2
RANBP10