ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501657 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◣ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
WDR74
STX5
TMEM107
EAPP
COL23A1
GBA
NUF2
FRA10AC1
DSTYK
TAF12
MTRNR2L1
PHC2
MTRNR2L8
SF3A3
MRPL21
IGHMBP2
INTS5
GANAB
POLDIP3
CCDC200
STX16
RBBP5
PTPN6
C12orf57
PARP16
H2BC21
H2AC21
H2AC20
SAR1B
S100A2
UCKL1
EIF2D
DUX4
SNAP47
JMJD4
FAM227B
DTWD1
MPZL1
SSBP1
KIF5C
HMGB1
USPL1
INTS12
GSTCD
NR1H3
ACP2
SELENOH
H4C8
S100A14
S100A16
CRTC1
TRIP4
PCLAF
ZBTB45
SLC27A5
DRG2
NDUFC2-KCTD14
NDUFC2
TATDN3
NSL1
SMG8
CCNL1
RPS7
H3C13
H2BC18
RPL37
CARD6
NPAS4
SIRT4
PYGB
TBC1D19
ZNFX1
FAM180B
NDUFS3
KBTBD4
FXYD3
PSMF1
SIT1
CCDC107
ARHGEF39
RAD54L2
PARD6B
H4C12
H4C11
H2BC14
H2AC14
EIF1AD
CST6
BANF1
DCP1A
NMNAT1
LZIC
LMNA
MTRNR2L2
MSH3
DHFR
CCDC88A
METTL9
YARS1
S100PBP
STAT3
DPY19L4
H4C6
H1-3
H3C6
SLC44A1
NOC4L
DDX51
GARS1
POLR3E
MRPS23
H2BC5
H1-4
ZNF207
C17orf75
LAMP1
SEC13
NME1-NME2
NME1
MRPS18C
HELQ
ERCC6L2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
RUVBL1
LRRC37A3
DMAP1
COL16A1
PCID2
CUL4A
UQCC1
ADPRHL1
ETV4
RPS6
STAT1
STOML2
PIGO
FAM214B
H1-2
PRRG2
NOSIP
SRSF4
MGAT5B
JRK
DDIT4
GTF2H2C_2
GTF2H2C
TUBGCP3
H2BC15
H2AC15
MRPL40
HIRA
PTPRH
MTF2
KIF2C
H3C3
H2BC3
LRRC59
AAR2
KLHL20
PPIP5K2
GIN1
NUP54
TAF1D
C11orf54
AURKAIP1
TVP23B
SNAI1
ARTN
PTPRN2
CALHM2
CALHM1
MAT2A
CDKN2AIPNL
KMT2C
MPHOSPH10
MCEE
DYNLRB1
RGPD1
RGPD2
SNX24
ARL8B
TSC2
NTHL1
PSMD9
HPD
STX18
CLUH
TEX9
RFX7
NFE2L2
KNL1
TMEM262
VPS28
RASA3
POLG
KMT2E
TTC4
RPLP1
FAM187A
EFTUD2
CCDC103
H4C9
H2BC11
H2AC11
STAG1
GFAP
WDR24
STUB1
JMJD8
C12orf65
MRPL1
BSPRY
ELAVL3
PSMD6
TTLL11
JUNB
SMARCD2
TSFM
RARA
DHRS3
DNAJC25-GNG10
DNAJC25
SCAND1
GEMIN7
ZNF296
ATP5MC2
BNIP1
ZC3H10
RPL41
SYT7
SRSF7
RANBP2
DUS1L
NT5C
REXO4
ADAMTS13
DDX1
GTF2H2
SNRPE
MLEC
F2RL1
ST3GAL2
GINS3
LAMTOR5
RPS20
NUP153
COMMD2
NSUN4
C8orf37
GRAMD1C
TEKT2
ADPRS
MRPL34
DDA1
ABHD8
FAM98B
PAFAH2
CCAR2
C8orf58
AQR
RPS5
SDHAF3
RPS2
RNF151
TBL3
NOXO1
ZNF358
MCOLN1
G6PC3
LSM12
BANP
COMMD1
CCT4
POLD1
NR1H2
SLC33A1
DDX19A
MRPS14
ISLR
ADNP
DCAF10
PYROXD2
STN1
WBP1
INO80B
MRPS35
RPS19
ALG10B
TMED2
TEX46
KDM1A
PHF12
ESCO1
VIM
GTF3C3
C2orf66
NSA2
GFM2
TEFM
RPL27
IFI35
MAPK1IP1L
BAX
WSB2
FAM133B
PRRT2
MAZ
SPRYD4
ZNF749
TRMT61B
RPS3A
PMPCA
ENTR1
TRPM7
TIMM22
SNRNP70
TDG
C12orf73
CLCN7
MRPS31
LDAH
SNRPB
CBX5
HNRNPA1
KCNMA1
SFPQ
WDR36
ABCC3
TMEM222
UCHL5
RO60
BRF2
RAB5IF
AP3S2
MED4
NFX1
PSMC2
DNAJC2
H4C3
H1-6
TESC
EIF1
MRPL55
CIAO3
RCAN1
PTGES2
USP30
RPL12
LRSAM1
MTIF2
ZNF398
ZNF425
MORF4L1
EFCAB2
ADAR
PHLDA1
NCOA7
ITPKC
COQ8B
GTF3C5
VIRMA
ILF3
UTP3
ERCC1
ACYP2
H2BC12
H2AC12
OMA1
DAB1
RPL29
TOR1A
PPP1R14B
LOC114841035
FKBP2
MED18
FZD1
PLCB3
MRPL58
EMC3
PPRC1
TOB2
MRPL20
CCNL2
ID1
PURB
CKAP2
VPS36
NPR1
ILF2
FCGR3A
FURIN
AARS2
GPRC5A
HEXIM2
FAM207A
BMS1
H4C2
H3C2
H2AC4
BRMS1
RIN1
CZIB
H4C1
H3C1
H1-1
NOTCH2NLC
RPL22
RNF207
C8orf33
CDK5RAP1
COX16
ATXN2L
NOL11
POLR2J
MRPS2
C9orf116
FAM228B
TACO1
TP53I3
SF3B6
TMEM101
INO80C
BHLHE40
PDE6A
ZER1
TMEM167B
GTF2B
TTI2
NDUFA11
VMAC
OTUD7B
RPL26L1
BCL3
PPP4R2
PLEKHB1
CAPS
ZC3H6
YIPF2
TIMM29
AP5S1
PRPF4
CDC26
VPS72
PIP5K1A
ZNF581
ZNF580
MBTPS2
HSPA6
FBN3
CCDC59
UBA52
SAMD1
C19orf67
MISP3
ZNF3
COPS6
ZC3HC1
CCDC15
MAP2K3
H4C7
H3C7
S1PR2
KCTD5
DPP8
UBL7
P2RY11
PNPT1
RRP15
TMEM39B
EIF3G
TBC1D13
RPS15A
CCNT1
HIPK1
ATAD2B
SYT5
CTNNB1
DCAF8
PHB2
RPTOR
HROB
MAF1
CYC1
WDR97
PANK4
HES5
IDH3B
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
NFKB2
LIG4
ABHD13
GPN1
CCDC121
SNRPD1
UQCC3
LBHD1
MRPL27
EME1
CSKMT
C11orf98
EPHB4
NANOS3
GSN
FAF2
UBA2
PRMT5
MBNL2
DUS2
DPEP2NB
DDX28
PRDX1
WDTC1
TOR2A
EMC4
RASA1
MYL5
ATP5ME
CRB1
ANGPTL4
PAQR5
EIF2B5
ARID3B
SEC22B
RPGR
NFYC
PARP2
ARL6IP1
TMA16
MLLT11
SLC39A4
CPSF1
CCNB1IP1
ALDOA
TMEM190
TMEM238
RPL28
CDC42SE1
TMEM250
YWHAE
TBL1X
PECAM1
ZNF789
ATP5MF-PTCD1
ATP5MF
PRR5L
COMMD9
TRAF7
RAB26
WDR70
NUP155
ZMPSTE24
MAN2C1
H2BC4
H2AC6
SMG7
TBPL1
MACC1
H3C10
H2BC13
H2AC13
PLIN3
DGKD
ZFAND2A
OAZ3
MRPL9
MRI1
C19orf53
TAS1R1
NOL9
NBPF1
EIF2B3
ADAM22
SOS1
FCHSD2
POU2F1
CLUAP1
C16orf90
RIPOR3
RAB13
RPS27
ITGB3BP
EFCAB7
TPD52L2
ABHD16B
BICD1
RRP9
PARP3
SIRPD
OPA1
HEXA
BTRC
DPP9
SNRPB2
LRWD1
ALKBH4
H2BC17
H2AC17
H3C12
H3-2
S100A10
NTSR1
MRPL3
MTR
RRAD
CIAO2B
CES2
RPS24
POLR3A
BIRC2
DRAP1
C11orf68
SHMT1
NID1
RNASEH2C
KAT5
SV2A
RAD52
SRCAP
LOC730183
RPL5
CD2BP2
MTMR11
SF3B4
TRIB1
SAAL1
ARID1A
MALL
TCF12
PCNA
TMEM230
RFXANK
BORCS8
MIA3
TSNAX
YTHDF2
MYH7B
GSS
BCAT2
ACBD3
TNFRSF10B
PRRT3
INPP4B
FRMD4A
SH3TC2
OSCAR
NDUFA3
SUPT5H
RPS16
EPRS1
H3C4
H2AC7
ZBTB40
H4C5
H2BC7
HSD17B12
TCF7L2
CORO2B
CALR3
C19orf44
TAF5
PARK7
PCIF1
IQCH
AAGAB
RBM45
PDE11A
CSRP1
ATF6
ZNF106
SNAP23
IQSEC3
PHLDB2
SYT8
POLR2J3
SART1
DNAJB1
R3HDM2
INHBC
TAF6
MBLAC1
CNPY4
TECR
RPL26
KRBA2
C5orf15
NACA
SLC20A1
NAA20
DCLRE1B
AP4B1
HEATR1
TGFA
CPT2
HPCAL1
RPS3
TMEM79
SMG5
BOD1L1
CNPY2
USE1
TMEM259
CNN2
ZNF286A
FAM3C
OCIAD1
TPCN1
IQCD
PDS5A
FAM53C
CDC25C
GALK2
COPS2
PUM3
POLR3B
NDUFAF5
ESF1
SYCE2
PPP6R1
NAA80
IFRD2
HYAL3
SNX17
ZNF513
EIF2B4
NUP107
MTOR
PRKAR1B
CDK12
ETV3
FAM200B
GATAD2B
MED1
NBPF15
CRTAM
H2AX
DPAGT1
HMBS
RBSN
GOLGA1
BUD13
PBRM1
GNL3
THEM4
QTRT1
SRA1
SLC35A4
APBB3
UBE2H
TGDS
GPR180
CEP135
EIF4EBP3
HOOK2
YTHDF1
SEMA3B
LSMEM2
NDUFS7
MRPL24
MDM4
STYXL1
CAAP1
ASB6
ZCWPW2
AZI2
LCMT2
ADAL
BLOC1S6
SRFBP1
C16orf86
PARD6A
ACD
TNFRSF1A
POLM
ASIC3
RBM28
NUCKS1
INPP5F
WWTR1
LY6E
PCM1
ZNF696
INTS4
H4C4
NDUFA12
ZSCAN30
TSSK6
NDUFA13
ADGRG1
H2BC6
PCARE
DOHH
FZR1
SNX19
ARHGAP19
NARS1
NUP133
CUTC
COX15
NCOA5
PSMA1
ACBD5
SQSTM1
PUSL1
ACAP3
ITGB3
GPR25
PSCA
CD22
UBE2D3
AP1G1
PGP
E4F1
DIAPH1
SACM1L
LARS2
DHX8
SNF8
SECISBP2L
BIN3
KLF9
RABGAP1L
SH2B3
CISD2
FOSL1
FCRLA
CALR
SMN2
SMN1
FARSA
CCDC124
WDR11
HAUS5
IRF2BP2
ENO1
ULK4
UTP25
DUSP7
CFAP45
B4GALNT3
TRIAP1
COX6A1
SLC3A2
SPHK2
RPL18
FAM83E
MAGOH
USF1
TSTD1
AVPI1
TPK1
KRR1
H3C8
H2BC10
ARHGEF12
CWC25
NDUFAF3
IMPDH2
DALRD3
TTC17
TEDC1
CDC73
RNF166
CTU2
TBC1D23
MITD1
TAMM41
YAE1
PKMYT1
PEMT
ZNF721
PIGG
PHAX
ALDH7A1
RPL6
PTPN11
POLR2C
MAP1LC3B
FBXO31
COMMD4
C1orf74
MAPK8IP3
IREB2
AMACR
ETS1
SSH1
ALDH1A3
ZCCHC4
SLC30A6
MFSD12
HMG20B
GTF2H3
EIF2B1
PKM
TBRG4
SRSF2
MFSD11
COPS7A
POR
GGCX
BORCS7
SLC39A3
SEC11A
MSL2
ZNF668
ZNF646
NOL12
SLTM
COA7
PDS5B
LGALS1
PSMD3
TOR1AIP2
TOR1AIP1
AP2B1
VAMP1
PEX12
HSPA9
AGAP3
TMUB1
FASTK
EXOSC6
NUP42
TTC1
STX4
INKA2
DDX20
CLDN4
FLOT2
DHRS13
INAVA
IL37
SSNA1
ANAPC2
TSN
NSFL1C
ESYT1
PTBP1
POLR2M
NOC3L
MUL1
DDX59
HSPA8
DIDO1
GID8
B3GNT7
CLDN20
TMEM208
LRRC29
ING4
RMND1
ARMT1
STMP1
ROM1
EML3
B3GAT3
RSRP1
UNK
H3-3B
NOTCH2NLA
NOL7
KLHL12
ZCWPW1
PPP1R35
MEPCE
C8orf76
RARS1
ORC5
SLC35E2B
VAMP4
ZDHHC7
MTAP
SOAT2
IGFBP6
MARCHF2
LURAP1L
LAT
SPNS1
FBXO24
LRCH4
ATN1
RDH5
ITGA7
BLOC1S1
CHD1L