ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375362 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◣ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DUX4
FRG2C
VASP
NLRP12
NFKB2
LAMP1
GATA4
AKR1C3
CMPK2
DENND3
FMNL3
LILRA6
LILRB5
WDFY3
MTRNR2L1
SPATC1
GNA15
ABT1
PLSCR1
TMEM45B
AGTRAP
LOC102724770
DGCR6
STEAP4
OR10J1
PGK1
FRG2
SFTPD
BOD1
PDLIM2
CALR3
C19orf44
GSTA4
XRCC5
NIBAN3
GPAA1
EXOSC4
NAA80
IFRD2
HYAL3
FEM1A
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
CBFA2T3
H4C12
H4C11
H2BC14
H2AC14
CTDSP1
KLF2
SMPD3
ZNF444
CTTN
ADGRG1
CALCOCO1
GSPT1
SEMA4B
RPS19
NEUROG1
H2BC15
H2AC15
CHMP4B
FGF6
DCP1A
DMPK
DMWD
TMEM39B
SLC18A2
PSTPIP1
NLRP2
RNF149
SCAF1
RRAS
CMIP
UBXN8
NUDCD1
SLC12A6
NUTM1
NOP10
DYNC2H1
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
DDX58
PEX3
ADAT2
GBA
TMEM243
NDUFS7
SORBS3
CCL26
KBTBD6
MTF2
NBEAL2
CCDC12
ZDHHC3
EXOSC7
DCAF12
NBN
RPL36
MICOS13
HSD11B1L
ZFYVE28
CFAP99
ZCCHC4
BCL3
CXCL8
SH3BP2
ZNF221
JRK
PRSS3
CYTH4
CSF1R
PANK4
HES5
MEF2C
EXD1
CHP1
FBXW4
PPIAL4C
NDFIP2
MED23
ENPP3
CYRIB
GPBAR1
PNKD
AAMP
PBK
PPP1R12C
TOR1AIP2
TOR1AIP1
MTMR9
DNAJC5B
GPR88
DPY19L4
MRGPRG
MRGPRE
TSSC4
GRPEL2
TSNAXIP1
RANBP10
INTS9
HMBOX1
ARHGEF1
CD79A
APOL6
MTIF2
SIGLEC1
SREK1IP1
CWC27
ZBTB45
SLC27A5
TMTC3
CEP290
ST3GAL2
PAFAH2
CLPB
POMP
KBTBD7
AXL
PGBD4
EMC7
DAZAP2
NFATC3
ZC3HAV1
H2BU1
H2AW
CD1A
TBPL1
TYROBP
NFKBID
HCST
NCF2
AP2B1
PEX12
CYP4V2
TRPV4
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
GNG2
C1orf159
JOSD2
ASPDH
CCAR2
C8orf58
SLC25A10
MRPL12
RPS20
GTF2H2C
GTF2H2
PRR5
TLR4
ACTN2
IL7R
ZC3H6
SLC1A5
HSH2D
ZNF554
UCKL1
TPRKB
MAPKAPK3
CISH
IL1B
USP3
GTF2H2C_2
FAM207A
MRPS31
CALM3
PPP5D1
HIKESHI
PEMT
SH2D3A
VAV1
BANK1
LRRC37A3
TMEM104
NAT9
GLRX
KMT2B
DRG2
CD40
AKR1A1
BMF
RIPK1
HPSE2
NPRL2
TMEM115
CYB561D2
FBXW11
SLCO2B1
BTRC
CCDC200
SPDYE17
CD33
ARID5A
SF3A3
FRG1
SSBP2
TMBIM4
MEFV
KANSL3
FER1L5
SLC39A13
TPCN1
IQCD
SYMPK
FOXA3
H3C13
H2BC18
B4GALT3
C10orf105
NUF2
DOCK8
FRA10AC1
MS4A3
PTK2
NOTCH2NLA
EAPP
FAM227B
DTWD1
MRPS18C
HELQ
PPP6R1
AURKAIP1
CTU1
DTX2
PHF2
COL8A2
SIGLEC9
ZNF76
RAB24
PRELID1
TCEA2
ICAM1
TIMM21
FBXO15
VCPIP1
C8orf44-SGK3
ZSCAN22
IPPK
BORCS7
TMEM91
B9D2
TGFB1
KIAA0895L
EXOC3L1
E2F4
ELMO3
MINDY3
SST
PLEKHM3
PRKCE
SLC27A3
OLFML2B
DHRS12
TMEM222
TRDMT1
ANKRD40
SLC24A1
INTS14
ARHGAP35
AP2S1
EXT1
BAZ1A
A2M
NAIP
SEPTIN9
SCNN1A
LTBR
HLA-DOA
CES1
CHPF2
ABCF2
HDGF
MRPL24
CCDC9
RNF220
HIBCH
FLT3
NOTCH2NLC
ODF3L2
MADCAM1
TNFRSF10B
LYN
WNT2B
LRP3
INO80D
RPS5
ITGA4
UNC45A
HDDC3
ARPC3
ARHGAP25
TAL1
PROB1
SPATA24
LRRC59
THAP1
RFX2
LCMT2
ADAL
RBCK1
H4C3
H1-6
SSBP1
BECN1
PSME3
PAF1
UBAP1
ZFP36
GNB4
DNAJC10
CXCL1
NR3C1
PROS1
ARL13B
SCRIB
POLE4
SNX11
CBX1
CCDC7
ADGRE2
GHRL
MAP3K5
SPINK8
DDX23
SPPL2A
POLRMT
FGF22
H2BC5
H1-4
RMDN2
ZNF333
GTF2H3
EIF2B1
CHMP7
ARID3B
IPCEF1
LARS1
CEBPD
TOMM22
TESK2
MMACHC
CCDC163
RRM2B
BNC2
PYCR3
GFUS
ALOX15
TMEM68
TGS1
VPS13B
DRAP1
C11orf68
CHCHD5
DENND4B
MUCL1
NDUFS3
KBTBD4
FAM180B
RPL29
ASGR2
PPRC1
FAM228B
TP53I3
SF3B6
RNPEP
TAF1B
MRPL34
DDA1
ABHD8
NSMAF
NEDD9
ITGB2
RASA1
RPS15
SIRT2
NFKBIB
APPL2
EIF2D
DNAH2
EFNB3
ZC3H3
JMJD1C
ZNF780A
ZNF513
SNX17
EIF2B4
ANXA2R
MAPK1IP1L
LIM2
GNA11
RPS3
KEAP1
ZNF148
STAT1
SLC35F5
COX18
SLC38A10
FUT10
NSFL1C
SLTM
TMEM204
INTS12
GSTCD
ADGRE1
DNAJC11
RAC2
RGS12
AARS2
H1-2
ZFP64
INPPL1
FOLR2
MRPS28
ALDOA
CCR5
CCR2
POLR2J3
RMND1
ARMT1
CCPG1
C15orf65
KLHL33
ZFYVE1
LRFN3
MITD1
RUBCNL
INVS
ERP44
TTC33
BRF2
DR1
XCR1
KIF25
DPY19L3
KASH5
UCHL5
RO60
FBXL19
INO80C
OPA1
H4C4
H3C4
H2BC6
CD1C
ZNF410
ELOB
ZNF286A
PRSS33
LTB4R2
LTB4R
CIDEB
PIWIL4
LYRM1
ZNF350
TDRD9
ATP5MPL
FNTA
PHB
SLC44A1
SEC14L1
KIAA0930
LRRC71
NOD2
PSMF1
PRKD2
HMGB1
USPL1
NTAN1
ZNF749
POR
IER3
FLOT1
CTSG
SIRT6
ANKRD24
RHBDL1
SNUPN
RHOT2
TIMM10
SMTNL1
PLAT
GPR15
CLDND1
ZNF180
PEAK3
MOB4
CHD1L
PRKAB2
ADAP1
TBL2
ANKRD18B
GPR68
PSMA8
ADGB
DCSTAMP
LILRA4
TNFAIP1
IFT20
TMEM229B
ASNSD1
ASDURF
CEACAM21
ENOSF1
ZAR1L
BRCA2
RPS6KA1
LILRA2
RPL5
JUND
TRABD2A
REXO1
ECSIT
CNN1
FBXW7
PIP4K2B
SMC6
GEN1
RASSF2
ACTRT3
MYNN
CHST13
NDUFB8
HIF1AN
DSCC1
PA2G4
HNRNPUL1
FOXS1
TSC2
NTHL1
NCBP3
LMO2
PCM1
RPL27
IFI35
TRIM25
EFCAB2
TRIM44
RASSF4
SDHAF3
AP3M2
GTF3C6
CALR
RAD23A
WDR87
SIPA1L3
RSU1
LIPM
RASSF5
AP1B1
SLC33A1
TSG101
ARHGEF18
RFESD
REX1BD
FZD1
HCK
SAMD1
C19orf67
MISP3
RPP38
ACBD7
WDR55
DND1
ANKRD39
RALB
SEMA4C
EDDM13
TMEM231
TSSK6
NDUFA13
KCTD18
HPS6
ARMH3
PDXK
OBI1
CTSB
TSC1
GFI1B
TMEM242
ZNF225
PRRG2
NOSIP
NDUFB7
KMT2A
RAB4B
MIA
RPIA
USP32
KCNK9
SDSL
C6orf89
SGF29
REEP3
LAMB3
RNF125
DNAJB2
EMP3
CCDC114
TCTE3
ERMARD
ANKRD46
NFE2
PARK7
RSAD1
CHAD
DCLRE1B
AP4B1
VWA3B
SPRED2
SMPD1
TMEM208
LRRC29
TRIB1
SIRT1
INTS10
YES1
MRPL44
CCER2
DSTYK
SNRNP200
DHX8
SLC35E2A
VSIR
PPP2R2B
TEFM
PGBD2
TMEM123
RCC2
INPP5D
CCDC152
RPS7
EXOSC3
ZNF557
PIK3CG
TFPT
PRPF31
SCRT1
DGAT1
POLR3B
DISC1
BLOC1S5
H4C9
H2BC11
H2AC11
PSMA1
H2BC12
H2AC12
GTF2A2
RBM17
DCANP1
UTP3
LHX9
C1orf53
CFAP298-TCP10L
CFAP298
ERICH4
DMAC2
PRSS36
PRSS8
TP53I11
SLC12A3
SIGLEC11
PNPLA6
RRS1
ADHFE1
HMOX1
LIFR
UNK
H3-3B
MDM4
MRPS23
TRAM1
H3C8
H2BC10
LSM14A
PLIN5
LRG1
SYNE3
PDE6D
COPS7B
COPS7A
TOMM6
PRICKLE4
FRS3
PISD
ZSCAN30
RMDN1
CPNE3
SUN1
BID
CCDC97
S1PR4
NCLN
MARCHF7
RFC2
CRH
ABCA9
NUP54
DHX16
NOTCH1
PPP1R18
NRM
ERMAP
SVBP
CAPN15
H4C2
ZNF235
THOC3
H4C1
FKBP1A
H3C1
H1-1
PEX2
ANKRD13D
LTB
LST1
NCR3
RAD54L2
RBM28
HSPE1-MOB4
HSPE1
HSPD1
ATXN2
SNRPB
ZNF226
MAP1S
RUNX1
OLFML3
MRPL3
MLLT1
H4C13
H3C11
H2AC16
H1-5
ZNF227
ALOX5
CCDC88A
CCDC124
TSPAN10
NPLOC4
MACROH2A1
HIGD2B
BBS4
CCDC150
GARS1
C10orf88
CIPC
NFKBIA
APBB1IP
SLC39A1
CREB3L4
UNKL
C16orf91
CRTC2
UBE2T
PPP1R12B
PERCC1
SLC4A2
CDK5
ASIC3
HUS1
WASHC4
SNCA
CPQ
PIP4K2A
SEC13
TXNDC15
MYC
CEBPA
H2BC21
H2AC21
H2AC20
RCOR3
MRPL1
LY6D
SLURP2
LYNX1-SLURP2
LYNX1
DHRS7B
PLEKHG3
GAB2
STON2
EEF2
UBIAD1
FEM1B
CAPNS1
ZNF558
MBD3L1
FIGNL2
HEXIM2
TEX44
RPL18A
YARS1
S100PBP
THEM4
ZNF696
PTK2B
TRIM35
JAK3
CCL3
NEUROG3
TRAK2
STRADB
HINT3
EPHB4
ELAC1
EIF4G3
USP15
FMNL1
MS4A6A
CCDC59
PPIL2
BIRC2
H4C6
TEX22
H4C7
H3C7
UBTF
H2BC9
RPS2
RNF151
TBL3
NOXO1
C8orf33
TPM4
CAMKK1
SYT8
TNNI2
SIGLEC6
BRIX1
TLN1
CREB3
UPF1
STING1
CTDP1
ATG16L1
CAPG
TMEM147
ZNF623
IQGAP2
STOML1
PML
MRPL16
TNIP1
FRAT1
SLC25A6
SERPINB1
RYK
TRIP4
PCLAF
KDM4B
LONP1
CATSPERD
CDKN2AIPNL
SELENOH
ZNF358
MCOLN1
GSK3A
BTBD18
WDR41
HENMT1
BLID
BRWD1
SOX6
C11orf58
MAN2C1
PDSS1
ACTR3
ZNF512
C2orf16
UBR2
GABPB1
CLK3
ROM1
EML3
B3GAT3
SCAMP1
GAS6
POMZP3
SLC35B4
SYCE2
MYO18A
IL1RN
H3C3
SMIM20
UBLCP1
H2BC3
NME7
BLZF1
RUVBL1
SNAP47
JMJD4
TMEM167B
EEFSEC
NUDT4B
QSER1
NINJ2
SERPINE1
MRPL21
IGHMBP2
ZNF56
ZNF567
MED4
S100A13
S100A1
CHTOP
TBRG1
NDRG1
RPRD2
PPIAL4H
TRIM65
MRPL38
KLHL20
MAK16
RECQL4
LRRC14
MFSD3
BSG
GPT
MLNR
INSC
MTRNR2L6
PRCC
TMEM70
ELOC
TMED9
B4GALT7
SH2B1
CCND3
TUFM
TATDN1
NDUFB9
MRPS33
CAB39
ARHGDIB
AHCYL2
WDR70
NUP155
RCBTB2
STX3
MRPS35
STK25
PRSS22
PLD3
C19orf47
AVEN
PIK3AP1
P2RY14
IRF9
EMILIN1