ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327759 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◣ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NAA80
IFRD2
HYAL3
HIKESHI
NPRL2
TMEM115
CYB561D2
PHB
CALR3
C19orf44
CALCOCO1
SMPD3
TCEA2
CLPB
TMTC3
CEP290
INVS
ERP44
UCKL1
PAFAH2
PPRC1
ST3GAL2
TESK2
MMACHC
CCDC163
GPBAR1
BOD1
PNKD
AAMP
AHCYL2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
SLC39A1
CREB3L4
CRTC2
LARS1
ODF3L2
MADCAM1
ORMDL3
GSDMB
STAU1
CCP110
GSPT1
ARHGAP35
AP2S1
PANK4
HES5
CHMP4B
TSNAXIP1
RANBP10
UBE2T
PPP1R12B
PYCR3
GFUS
NUDCD1
KBTBD7
SYMPK
FOXA3
ZNF189
MRPL50
HDGF
MRPL24
UNKL
C16orf91
PERCC1
NTAN1
ZNF225
PPP1R12C
KBTBD6
SCRIB
TNFAIP1
IFT20
DDX23
BTRC
ZFYVE28
CFAP99
CTU1
TSSC4
TTC13
SNX17
ZNF513
EIF2B4
DEXI
CLEC16A
C1orf159
PEMT
MED15
UBQLN4
LAMTOR2
FASTKD1
GATB
RPL36
MICOS13
HSD11B1L
PHF12
MAD2L1BP
GTPBP2
SLC35B4
SV2A
BOLA1
CNIH4
ZNF749
UBAC1
NUDT13
VCPIP1
C8orf44-SGK3
FEM1A
ING4
UNK
H3-3B
TSC2
NTHL1
TIMM21
FBXO15
SCAF1
RRAS
CBARP
MIDN
ATP5F1D
SIRT2
NFKBIB
TMEM127
CIAO1
TFEB
TMEM59
WDR87
SIPA1L3
ZNF444
RPIA
WNK1
CCDC146
NDUFS2
ADAMTS4
ZNF56
AP2M1
RASSF1
ZMYND10
BANP
TTC33
OSCAR
NDUFA3
NOP14
GRK4
SLC4A2
CDK5
ASIC3
DYNC1I2
MRI1
C19orf53
COX7C
PHF13
JOSD2
ASPDH
SMARCAL1
ZNF517
ZNF34
RPL8
TRAK2
STRADB
ZNF169
ZFYVE19
DNAJC17
CHPF2
ABCF2
ZFYVE1
SNX27
RPS2
RNF151
TBL3
NOXO1
CTF1
BCL7C
SMUG1
TRAPPC3
MAP7D1
PRCC
RIC8B
BUB3
HMX2
NFXL1
DSTYK
TMEM208
LRRC29
TMEM70
ELOC
STK25
ZSCAN22
THRAP3
LETM1
CCDC174
PEX14
DFFA
HTRA2
DQX1
TFPT
PRPF31
ING3
VARS2
GTF2H4
WDPCP
MDH1
FBXW11
VPS50
HEPACAM2
USP48
ZNF337
TTBK1
ZNF235
CAPN15
ZNF384
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
TMEM101
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
UFSP2
C4orf47
CTDP1
ZNF420
ZNF350
CCDC150
EMILIN1
OST4
KHK
SOX6
C11orf58
GPKOW
AURKAIP1
DESI2
ATP5PO
ZNF37A
RPS7
CLP1
YPEL4
RABAC1
UBR2
SERPINI1
PDCD10
BUB1B
CNOT1
MYLK4
WRNIP1
LMNB2
NMT1
DCAKD
PSMD11
CCDC90B
RPGRIP1L
FTO
SDCCAG8
CEP170
ZNF768
ZNF747
ZNF224
RBM6
MON1A
SSBP1
RAB1A
CHCHD3
NUP153
SUFU
ACTR1A
ZC3H11A
ZBED6
TRAF7
RAB26
PEX26
ZNF133
PDE6D
COPS7B
RPS20
B3GALNT2
INTS1
ZNF230
DDX49
COPE
SEC61A1
CDK5RAP2
RPS6KB2
PTPRCAP
TIMM13
KMT2B
PRR14
FBRS
MARS1
ARHGAP9
AKIRIN2
FBXO46
MEIOSIN
SLMAP
MED27
PTDSS2
ANO9
TMEM43
CHCHD4
INTS9
HMBOX1
THYN1
ACAD8
UCHL5
RO60
IPPK
GPR108
TRIP10
PNPLA6
ZNF554
TTC1
TOR1AIP2
TOR1AIP1
KAT7
GPR15
CLDND1
PSMB4
POLR2E
GPX4
NCDN
KIAA0319L
CWC22
RALBP1
ZNF514
ZNF2
PSMD4
RTN2
FBXL19
GPAA1
EXOSC4
SAMD1
C19orf67
MISP3
MGRN1
UBALD1
CNOT4
ZNF484
ZNF32
PRRG2
NOSIP
ZNF354A
S1PR4
NCLN
SCAMP4
ADAT3
PANK3
ZNF419
ZNF772
ZGPAT
ARFRP1
RALGAPA2
UBL7
SPHK2
RPL18
FAM83E
TXNDC9
EIF5B
FBXO48
APLF
FAM193A
MXI1
ZCCHC4
PKLR
FDPS
PA2G4
ZNF227
SEC11C
RANGAP1
SNX1
CIAO2A
FHIT
VIPAS39
AHSA1
TMEM160
GABARAP
PHF23
DVL2
ZMYND15
MED11
CXCL16
ZNF547
TRAPPC2B
STK17A
ENOX2
WAPL
BICD2
LEMD2
RAB13
ZNF527
RPS27
MAF1
CYC1
WDR97
RAB5C
ZCCHC8
PHB2
VPS4B
EXOC4
LUC7L
FAM234A
RPS3
MAX
ZNF140
FHL3
UTP11
ZNF17
VAPA
CRK
ZNF226
WBP1
INO80B
YPEL3
TBX6
TMEM69
GPBP1L1
ZW10
CLDN25
EMP3
CCDC114
MRPL20
CCNL2
RAB29
FAM185A
SLC25A19
PRR5L
COMMD9
PTBP1
ZNF805
AURKC
NARS1
LTA4H
RGL2
PFDN6
WDR46
CDK8
CLDN6
TNFRSF12A
THOC6
HCFC1R1
ZNF862
RPL18A
CDCA8
C1orf109
SCYL3
FAM53C
CDC25C
SCRT1
DGAT1
AQR
PSMD2
LIN37
PROSER3
HSPB6
PSENEN
ASXL1
GINS3
DDX47
RACGAP1
PCM1
PIH1D1
ALDH16A1
DBP
CA11
SLC17A7
ZNF343
MBD1
CXXC1
PGBD4
EMC7
NEK8
RPL23A
RAB34
TLCD1
PROCA1
RAB30
METTL26
WFIKKN1
NFKBIL1
DDX39B
ATP6V1G2
NDUFB5
MRPL47
GPR137
ZNF773
METTL3
SNRPE
WBP2
IGSF8
CIAO3
COPS8
OPA1
SSR2
GID4
ATPAF2
CAND1
MUS81
CFL1
PIGU
SSR3
RPS26
BIRC5
KATNB1
CNOT6
TMEM186
PMM2
ZNF277
DOCK4
MORF4L1
PSMC4
MITF
ZMAT5
UQCR10
ABRAXAS2
EEF1AKMT2
AHCTF1
ZNF26
PRR22
DUS3L
CCAR2
C8orf58
PES1
RPL34
USP31
RBL1
TMEM94
TOR2A
DPH2
B4GALT2
ATP6V0B
SEPTIN9
TRUB1
PPP1R13L
POLR1G
WDR53
FBXO45
EIF2S2
TLE3
TERF2
CLPP
GSC2
WIZ
FAM228B
TP53I3
SF3B6
RPS13
VMO1
PSMB6
GLTPD2
USP35
KCTD21
BDP1
TPGS1
L3MBTL2
SLC50A1
DPM3
VRK1
ZNF451
ZSCAN5A
TMEM245
NAT14
ZNF628
THAP1
SH2D3C
CDK9
ZNF436
RAB7A
CAPN10
DPP9
TRABD
ZNF584
HSPA13
OAZ3
MRPL9
ZNF586
RNASEH2C
KAT5
ZNF500
SUCLG1
RWDD1
NOLC1
DOHH
FZR1
RETSAT
SESN1
CEP57L1
MED23
ENPP3
PRKCI
SYPL1
ZNF776
HSP90B1
NOP53
CWC25
FCSK
GEMIN6
ABCC5
EIF1B
NUP205
TMED9
B4GALT7
ZNF585A
RAD51AP2
SHLD1
DCP1A
SYNGR4
TMEM199
SEBOX
POLDIP2
STMN3
RTEL1
FBXL18
NUF2
ZNF25
TRMT1L
SWT1
USHBP1
BABAM1
POLRMT
FGF22
RPL12
LRSAM1
ZBTB7A
RXFP4
KHDC4
CSRNP2
PNKP
AKT1S1
TBC1D17
QTRT2
CCDC191
PRKCSH
CCDC151
BOD1L1
SNAPIN
ZNF764
GFM1
CARS1
EML6
KPTN
PPP6C
SUGP1
MAU2
CFAP410
ACLY
LSG1
CNPY2
TOR1A
RPP40
GGPS1
ARID4B
UBE2Q1
CHRNB2
CAPG
SH2D6
TOMM22
C12orf43
KBTBD8
CCDC124
XPOT
TRMT2A
RANBP1
ZNF599
IPO8
SCAMP3
FAM189B
ZSWIM9
LIG1
MRPL54
APBA3
RAX2
THRA
MED24
ZNF317
SF3A3
DNAJC28
ZNF416
ZIK1
FAM222A
UBE2V1
TMEM33
DCAF1
ELP6
ZNF221
SKIV2L
NELFE
RBBP5
ZNF567
RPL37
CARD6
RBL2
ZNF548
KCTD5
RAB3C
SEL1L
HIRIP3
SLC33A1
TSN
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
TMEM109
PRPF19
SMN2
SMN1
UBA52
CCNT2
ZNF446
ZNF324
ZNF789
ATP5MF-PTCD1
ATP5MF
INTS4
NME1-NME2
NME1
PCNA
TMEM230
ADSS2
CATSPERE
ZNF605
COG2
BET1
ZBTB45
SLC27A5
ILF3
VEZT
FGD6
STRN
MTA2
TUT1
GALM
THAP11
NUTF2
CENPT
GSK3A
BOLA2-SMG1P6
HPS6
ARMH3
YIPF2
TIMM29
CMPK1
ZBTB7B
GALK2
COPS2
ZNF180
MACC1
CHCHD6
SMIM13
IPO7
WASF1
CDC40
PPP2R5B
ATG2A
FBXO38
TMEM262
OSBPL11
SLC38A9
FAM149B1
ECD
FAM168A
NDUFS7
CCDC117
SERP1
EIF2A
ZNF268
MEN1
MAP4K2
SNRPB2
EIF3C
EIF3CL
SETMAR
ZDHHC16
EXOSC1
NUMA1
LRTOMT
SETDB1
NKIRAS1
RPL15
LRFN3
SASS6
REXO1
WDR45
PRAF2
ZNF45
ZNF550
NCBP2AS2
NCBP2
CCDC77
CACTIN
THAP4
ATG4B
SAMD10
PRPF6
EIF3F
PRPF4
CDC26
C15orf40
YJU2
TSACC
CCT3
TM9SF4
C1orf54
APH1A
RPS3A
SKP2
LMBRD2
TXNL4B
DHX38
DNAJC11
BRIX1
DAZAP1
GAMT
CLINT1
WDR18
COPS7A
RAB8B
YY1AP1
DAP3
OLFML2A
NR6A1
ESCO2
WDTC1
TIMM22
MVB12A
ZNF304
SH2B1
TUFM
MTR
DEDD
DARS2
CENPL
DNM1L
ZNF101
ATP13A1
SDF4
B3GALT6
UBA1
ZC3H10
RPL41
TMEM88
ESYT1
NAA38
CYB5D1
ADO
IFRD1
SF3B2
GAL3ST3
SHPK
CTNS
POLR2J3
GPT2
EIF3D
JRK
LRRC47
NSA2
GFM2
SART1
NMNAT1
LZIC
TOGARAM1
KLHL28
AP2B1
PEX12
DHX8
VKORC1
PRSS53
VAMP7
ZNF614
POMZP3
AKAP8
TSPAN4
POLR2L
CD151
UFD1
CDC45
SZRD1
ERF
RPS19
NOP16
HIGD2A
PNISR
ZNF721
PIGG
ZNF211
ZNF417
PGAM1
RBM41
DHX33
PSMD10
ATG4A
MRPS15
SUPT5H
RPS16
GPS2
EIF5A
TSNAX
ZNF155
KNSTRN
HEXIM2
MRPS16
DNAJC9
TMEM147
PIP5KL1
DPM2
PRPSAP1
PSMD3
PCNX3
MAP3K11
TSNARE1
IPO13
SLC39A13
ARHGEF1
CD79A
PRDX2
RNASEH2A
ZNF530
LRPAP1
STX10
IER2
NR1H3
ACP2
MAMSTR
UBE4A
N4BP2L2
CACYBP
ZSCAN32
ZNF174
PSMA2
MRPL32
SAP30
PPIP5K2
GIN1
CEP350
PPP1R11
POLR1H
RNF39
PUS3
DDX25
UBXN6
ZNF324B
ALG10B
ZNF165
OR1F12
HSPH1
CCNL1
TRUB2
COQ4
TTLL11
METTL18
C1orf112
UCK1
TINF2
GMPR2
NEDD8-MDP1
NEDD8
NAPB
ZNF79
CUEDC2
UBE2N
HSCB
CHEK2
FBF1
PARK7
WASHC3
MIA3
SNIP1
DNALI1
SLC37A3
RAB19
PSMC5
FTSJ3
STX16
CDC34
CTNNBL1
ALG10
MRPL21
IGHMBP2
PRUNE1
MINDY1
R3HDM1
ZRANB3
COA3
CNTD1
UBE2J2
RPP30
PSMC3
PURB
KIFBP
SSNA1
ANAPC2
NUP214
TMEM79
SMG5