ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9730734 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◣ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

UBC
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
H1-2
H3C3
H2BC21
H2AC21
H2AC20
H4C2
H3C2
H2AC4
H4C1
NFYC
PABPC4
CITED4
H4C6
H1-3
H3C6
RCC1
H2BC5
H1-4
WDR74
STX5
TSPOAP1
PLPPR3
AZU1
EAPP
H4C9
H2BC11
H2AC11
GPX1
EGR1
H3C13
H2BC18
TAF12
H2BC12
H2AC12
CAP1
H2BC17
H2AC17
H3C12
H4C12
H4C11
H2BC14
H2AC14
H2BC15
H2AC15
PARP2
H4C13
H3C11
H2AC16
H1-5
SLC3A2
HSPA1B
ST3GAL3
H4C7
H3C7
PARP16
ZMPSTE24
TMCO2
H3C8
H2BC10
EEF1A1
CEBPA
H2BC8
H2AC8
H2BC4
H2AC6
TASL
KIF2C
PTMA
ACTB
ZFP36
PLEKHG2
CCDC200
H1-10
H4C3
H1-6
H3C1
H1-1
H3C10
H2BC13
H2AC13
H2BC9
FTL
EXO5
H2BC3
PNP
PIP4P1
TMEM107
SIRT4
EIF4A2
H4C4
H2BC6
ZNFX1
TIMP3
DUX4
PRRC2A
AIF1
ZFP69
H3-2
TXNIP
ID1
NDUFAF3
IMPDH2
DALRD3
ANKRD13D
ZFP69B
MCL1
TRAF7
RAB26
POLDIP3
H3C4
H2AC7
H4C5
H2BC7
CD68
EIF4A1
LOC100996842
GBA
CFD
ELANE
ZBTB4
SLC35G6
POLR2A
MS4A6A
SRGN
ZFP36L2
CITED2
ZBTB37
CA2
TMSB4X
ZNF684
ZEB2
PLAC8
H1-0
GCAT
IRF2BP2
COL9A2
ZNF438
PRDX2
JUNB
RAB13
RPS27
MS4A7
RPL10A
BAHCC1
HNRNPA2B1
CBX3
H4C8
FAM166A
STPG3
TUBB4B
CALR
RAD23A
FARSA
PPIA
MRPS18B
ATAT1
FAM200B
MFSD2A
LOC730098
CCL27
SRSF2
MFSD11
METTL23
AMD1
HSPA8
HMGN2
UNK
H3-3B
PABPC1
ADAMTS1
LOC102724770
DGCR6
TNFSF9
IRF8
SLC25A11
RNF167
PFN1
ENO3
PPT1
FUS
MYBPH
CHI3L1
MBNL1
SRSF3
H2AX
DPAGT1
HMBS
S100A13
S100A1
CHTOP
MTF2
YBX1
IBA57
TRIT1
JMJD1C
MAT2A
HMGB2
ERMAP
SVBP
MYC
SLC38A2
HSP90AB1
SLC35B2
RPL10
RPL12
LRSAM1
MUS81
CFL1
RPS2
RNF151
TBL3
NDUFB10
RPL3L
DNAJB4
BBC3
FASN
NFKBIL1
DDX39B
ATP6V1G2
BMP8B
RPS20
RPLP0
GCN1
GAPDH
KLF7
HNRNPH1
HYI
NKIRAS1
RPL15
HEXIM2
SLC39A10
LYST
RPL27A
IMMT
MRPL35
C6orf226
H2BS1
TCTEX1D1
DHRS9
HSPB1
PRTN3
TOMM20
CIRBP
FAM174C
RPL11
DESI2
TEX30
BAZ1A
STAT1
MEF2D
RPL5
RPLP1
RNF220
TEDDM1
GLUL
ATF4
TUBB
MDC1
NUDT7
RPS6
FOS
MBD6
DDIT3
MTRNR2L1
ID2
SLC39A4
CPSF1
TRIM25
BRWD1
CTPS1
UQCC3
LBHD1
CSKMT
C11orf98
CDC20
ELOVL1
SMAP2
NRROS
STX10
IER2
SLC25A6
H2AZ1
DNAJB14
SP9
HSPA5
RPS11
RPL13A
MACROH2A1
RUNX1
HEYL
C6orf62
RBL1
EIF1
ZNF143
CBX5
HNRNPA1
YWHAG
ZBTB45
SLC27A5
RPS8
EFCAB2
HMGA1
PCIF1
H2BU1
H2AW
CARD9
GPSM1
AGPAT2
AURKAIP1
PTBP1
TPCN1
IQCD
PDLIM2
DPY19L4
ISOC2
GTF2A1
RIMS3
PLEKHM3
SDCBP
PTEN
KLLN
LIN9
RLF
TMSB10
ZC3H10
RPL41
SUPT5H
RPS16
SLC16A3
FAM43A
CCDC30
ZMYND12
PPCS
ZNF92
FOXD1
PPIF
INTS6
RPS3
COA6
RNPS1
SRSF7
RNF149
ATXN7L2
CYB561D1
PPP2R5D
PEX6
INO80D
RNASEH2B
MEF2C
ABTB1
SCRIB
FAM133B
RSRP1
GTF2IRD2B
P2RY2
RAD54L2
OARD1
NFYA
GRK2
ZNF124
COQ8A
ZBTB11
RPL24
TAF1D
C11orf54
LMNB1
MAN2C1
CTBS
PTPN6
C12orf57
ATN1
NCL
P4HB
TP53BP2
NSUN4
TTI2
TMBIM4
LAIR1
LDHA
HNRNPAB
ACTRT3
MYNN
NDUFB3
FAM126B
GMNN
NDUFS7
TCF3
ZFAND5
NOTCH1
KAT7
GLO1
RASSF5
PGBD2
DENND3
ZSCAN31
ZNF517
ZNF34
RPL8
RPL22L1
VASP
SEC22B
ZFAND3
RPL30
PPM1N
KCNQ4
GSTA4
C19orf48
TUBA1B
VGLL4
TMPO
TMA16
ZNF670
EIF2S2
RPL35A
IQCG
LMLN
KATNBL1
USP4
COQ2
SUZ12
RGL2
PFDN6
WDR46
JUND
IQCN
CHD2
TOR1AIP2
TOR1AIP1
ZNF207
C17orf75
RBBP5
YWHAH
C22orf24
SPI1
DOCK8
RRM2
S100A4
S100A5
S100A6
MYCL
S100A3
DDX60L
DDX1
MTR
EXOSC3
FOXP1
FUT7
C9orf139
ABCA2
EEF2
RFX3
CYTH2
MAF1
CYC1
CNPY3
PKNOX1
ANXA4
KCTD18
COMMD3-BMI1
COMMD3
BMI1
METTL21A
LAT2
TUBB6
PTCRA
CDKN2C
FAF1
RPL3
DDX59
MRPL1
RPL36AL
MGAT2
TBC1D5
FRG2
SLC25A28
CYP7B1
CCAR2
C8orf58
DCAF12
RPS19
RPL13
NARF
CYBC1
DMAP1
RPL17-C18orf32
RPL17
C18orf32
MRPL2
KLC4
CUL7
ANKRD40
RXRA
BAZ1B
DEF6
CLTC
LUC7L2
MARCHF7
GPR160
TRAM2
ERLIN2
REXO5
ERI2
TNRC6B
DENND4B
SUPT3H
COX7A2
SLC9A8
SRCAP
LOC730183
SEPHS2
PMAIP1
EIF2D
PPIH
HIPK1
SMARCD2
ZNF93
MRPL21
IGHMBP2
MLLT11
CDC42SE1
ZNF7
UBE2I
NLRP3
TRIM55
ZNF804A
RCOR3
ZER1
SERP1
EIF2A
TNPO1
KRCC1
PTGER4
FOXD4
KMT5B
KDM4A
PCM1
NUCB2
SNUPN
PEX3
ADAT2
EXOSC6
ZNF787
WDFY1
LDHB
PAXX
CLIC3
LCNL1
DLX4
RPLP2
PNPLA2
PIDD1
RPSA
GADD45B
EGLN1
PAIP1
PPP1R27
MCRIP1
FOXJ3
ASH2L
GABPB2
RNPEP
IL17RA
MS4A6E
UBB
TMEM70
ELOC
ARL8B
UCP2
AMACR
PXT1
KCTD20
CAPRIN1
NCAM2
RPL22
RNF207
SRSF1
LZTS2
SRF
RPL31
TCOF1
CUL9
ELAC1
HAUS4
LRRC24
ZNF22
C8orf82
CYCS
UNC45B
NLE1
ARF6
NOXA1
PDLIM7
FUT4
NSD1
RWDD1
POLG2
DDX5
PAF1
NPIPA3
NPIPA2
PLA2G10
CPEB2
SPN
FES
NPM1
NDUFS8
DHRS12
TCIRG1
REEP3
B3GNT2
FRY
ATAD2
MRPS16
DNAJC9
C6orf47
APOM
DCAF10
GPANK1
CSNK2B
LY6G5B
CBWD5
CBWD3
CBWD6
NRL
DCAF11
TUSC1
MRC2
OR52W1
C11orf42
DSTYK
SMG8
PYROXD1
ATIC
H3-3A
SCP2
ZNF341
CLPTM1
APOC2
UBE2R2
SINHCAF
ECHDC2
APOC4
BRF2
ITFG2
FKBP5
GRIN2D
TMEM216
ARMC12
KDELR1
ZC3H6
OAZ1
RPS15A
DHX9
RTL10
GNB1L
GTF2H2C_2
GTF2H2
MPDU1
VPS52
RPS18
B3GALT4
VPS28
COX20
NSMAF
HPS6
ARMH3
RPS23
ATP6AP1L
TSNAX
DPY19L3
NFKBIA
LCP1
LAPTM5
THSD7A
FRG2C
SRP9
TRA2B
USF1
TSTD1
STIL
CCDC85B
FIBP
PIP4K2B
FOSL1
ARHGEF2
D2HGDH
CSF1R
FSTL3
UBL7
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
C6orf89
TCTE3
ERMARD
SRSF10
SURF2
SURF1
RPL7A
MED22
TIGD5
EEF1D
VRK2
PPIL1
RACK1
EPM2A
SLAIN2
PTER
SFTPD
TIMM13
SLC39A7
RXRB
RING1
HSD17B8
FLYWCH1
APBB1IP
C9orf64
TMEM262
TMEM79
SMG5
ZFPL1
CDCA5
PSMD8
HNRNPU
AZIN1
LHX9
C1orf53
NLRX1
RASSF4
IRF5
MTRNR2L8
NOCT
ZNF200
SCAF8
CTSB
RPS7
TSPAN10
NPLOC4
TPM3
CC2D1B
PEAK3
RAB3GAP1
GMEB1
SLC39A1
CREB3L4
CRTC2
RPL36
MICOS13
HSD11B1L
AARS2
ZNF696
MARCHF6
VPS29
RAD9B
CRADD
BTBD1
CLSPN
FAAP20
TBC1D3H
TBC1D3G
TBC1D3I
TBC1D3D
TBC1D3L
TBC1D3B
TOB2
GTF3C3
C2orf66
S100A11
APOC3
APOA1
NBN
ZNF76
GEMIN7
ZNF296
EMC4
TCTA
RHOA
ANP32B
ZNF217
NUDT4
VAX2
STMN3
RTEL1
TMEM167B
SRSF6
DMTF1
LCN12
FBXW5
C8G
PPIE
HES6
ZNF107
P2RY6
ADGRL1
LEMD2
USE1
GNAI2
CLK1
TPM4
UAP1
MSN
UNKL
UCHL5
RO60
ZNF691
SLC35E2B
OIP5
NUSAP1
HYLS1
SMC4
IFT80
COTL1
IRX3
AHCTF1
ZWILCH
SNAPC5
RPL4
DRG2
NUCKS1
BIVM-ERCC5
POGLUT2
BIVM
TRAPPC4
RPS25
SLURP1
RABGGTB
CAMK2D
ENDOV
MYH9
SLC35D1
DCP1A
R3HCC1
PSEN1
GSDMD
BZW1
ANP32A
PARP1
DNAJC5B
SNAPC3
PCNA
TMEM230
CDS2
SELENOT
ACYP2
PCBP1
PSMA1
IPP
KLF9
TMCO1
SAYSD1
CBY3
TWIST1
SLC22A16
CCNL1
MAMDC2
LSG1
HNRNPA3
CAAP1
PRDM10
GPCPD1
SCARF1
RILP
CCR5
CCR2
HMGB1
VCP
FANCG
RBM25
ATP23
PDE12
GGNBP2
MYO19
PIGW
CHEK1
SLC20A1
SREBF1
PLEKHF2
TOLLIP
ZDHHC18
XPOT
TMED5
CCDC18
CHMP6
CEBPD
REEP4
TMEM117
HNF4G
BRIX1
PRDX1
SLC39A13
GOLGA3
PDE7A
GOLPH3
RDX
TYMSOS
TYMS
EIF2S3
MUC1
CMTR1
SLTM
GZF1
PIM3
E2F3
RPL36A-HNRNPH2
RPL36A
BTK
CCR1
GOLGA8N
GPIHBP1
MRPL40
HIRA
MYL12A
CEBPG
GFI1
GABPB1
TOP3B
CLPTM1L
RAC3
LSM8
CGAS
MTO1
DCXR
LARP1B
LILRA5
TPT1
THUMPD3
KEAP1
HYOU1
PTBP3
SMURF2
PNMA1
TMED9
B4GALT7
SDE2
ATP5F1A
THEM4
CYREN
TSSK4
MDP1
CHMP4A
OSBPL1A
ZBTB25
ZBTB1
DNM1L
TAGLN2
ENSA
DNAH14
ARFGEF1
SATB1
MYB
PECAM1
USPL1
SHC1
SNAP47
JMJD4
PYGO2
PBXIP1
LOC101928120
ANP32E
EIF4G1
BRPF3
SMAD7
LYN
ZAR1
SLC10A4
NXF1
POLR2M
ZCWPW1
PPP1R35
MEPCE
TRIM27
NOTCH2NLC
EPC1
UQCRFS1
ADGRE5
SCRT1
DGAT1
GRB2
DPYSL2
PROS1
ARL13B
XKR5
RPS5
TCF12
PKLR
FDPS
DNAJC25-GNG10
DNAJC25
PET117