ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

SRSF7
EAPP
HEXIM1
JPT1
SRSF2
MFSD11
TAF12
JUN
ZBTB45
TRIM28
PPM1D
FAM53C
CDC25C
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZBTB4
SLC35G6
POLR2A
RPL5
RPL3
NGRN
RHOB
ID4
NPR1
ILF2
C15orf39
TMEM167B
EIF4G2
CIRBP
FAM174C
HNRNPAB
TUBA1B
FUS
SFPQ
PIK3R3
HSPA1B
C12orf65
BCAR3
TAF4
THADA
KLF6
SRSF6
TRA2B
POLG
H1-10
EEF1A1
RSRP1
CALR
RAD23A
FARSA
ATF4
PPP4C
ALDOA
ZC3H10
RPL41
RSPH3
RPLP1
MDM4
JUND
IQCN
PRDX1
UNK
H3-3B
EIF4A2
CDH11
SND1
SLC38A2
ZBTB37
COQ8A
RCC1
PARP16
NCOA7
POLG2
DDX5
HNRNPH1
INTS6
DUSP1
SOD1
TPI1
SPSB2
YWHAE
GTF3C6
RPS14
GTF2H5
SRCAP
LOC730183
RPS11
RPL13A
TRAF7
RAB26
HNRNPA2B1
CBX3
TMEM242
SETD5
KCTD13
INTS2
WDR1
GPR61
GNAI3
SIRT4
SESN2
COQ2
FAM219B
SEPHS2
PABPC4
GBA
H2BU1
H2AW
RPS8
ECI1
KNTC1
NUP133
CITED2
CD68
EIF4A1
TFRC
UBB
EIF5
FBXL3
EEF2
RPL11
NKIRAS1
RPL15
DNTTIP2
BTG3
CZIB
AAAS
UBE2S
RPS2
RNF151
TBL3
NDUFB10
RPL3L
ACTB
VPS72
PIP5K1A
NOL11
NASP
ZNF143
STMN1
DLG2
CBX5
HNRNPA1
SNRNP48
FSCN1
MRPS18B
ATAT1
ZBED8
OAZ1
E2F3
CALM2
MYLIP
LTA4H
MTRNR2L1
SRSF1
SLFN11
MAT2A
BAMBI
IDH2
TOB1
SMOC1
TP53BP2
RBM26
SLC27A3
C19orf48
PRRC2B
SRSF5
SPECC1L
RNF220
POLE4
S100A13
S100A1
CHTOP
NDUFV3
SCAMP2
RRP1B
HSF2BP
MAPT
LUC7L
FAM234A
RPL6
PTPN11
EFCAB2
PPIA
NFYC
HMGN2
LTN1
TUBD1
RPS6KB1
NOP14
GRK4
C16orf72
FAM166A
STPG3
TUBB4B
SIPA1L1
SV2A
DPP9
MTMR11
SF3B4
HSP90AA1
HSDL2
PSRC1
SOD2
WTAP
WDR74
STX5
CCDC200
ITFG2
TMEM107
DDX17
SLC1A5
UBC
EIF1
B4GALT3
ARIH1
MTHFS
NUP214
NABP1
ATP5PO
TBCE
RPL31
PSMC6
TSPAN3
POLR2J3
KIF5B
MTHFD2
RPL19
CACNB1
ABCA5
LUC7L2
FMC1-LUC7L2
FMC1
LSM14A
LOC105378979
BBC3
LAP3
TIA1
PCYOX1
HINT3
RBM12
CPNE1
ALOXE3
HES7
MKNK2
MESD
DEGS1
HSPA5
DCPS
XBP1
DGCR8
GADD45A
ALDH3A2
MCMBP
MTRNR2L2
MSH3
DHFR
CHRNA5
MORC3
ZDHHC4
DYNLL2
RPS15
LIN9
YBX1
FAM200B
BTBD10
SDHAF4
HEXIM2
DCAF8
WRAP53
TP53
RAB11A
VAMP1
SRSF3
UGP2
UGCG
DHX9
EIF4A3
PKM
AFF1
TRAF4
DLX1
H4C2
GDI2
H4C1
SRRM2
H3C1
H1-1
TGOLN2
CDK1
AMD1
AGL
FAM71E1
EMC10
OAZ3
MRPL9
MYBL2
NCL
ACTRT3
MYNN
CHEK1
C1QTNF6
TAF1D
C11orf54
RPP25L
DCTN3
CFAP20DC
CALM1
ACAD9
MCL1
SACM1L
TEDDM1
GLUL
TM2D3
DHRS12
PHAX
ALDH7A1
RNPS1
H2AX
DPAGT1
HMBS
TAF15
SNX3
TAOK1
ZNF771
YWHAQ
ESR2
ULBP1
STAT1
YWHAG
RBM25
KLHL11
SMYD4
RPA1
PHF10
FZD8
C6orf62
ACSL3
COMMD4
GGA2
RNF122
MTF2
THOC3
ZNFX1
GORASP2
HDAC1
TRA2A
NDUFAF3
IMPDH2
DALRD3
BLOC1S5
MANSC1
BORCS5
ARPC1A
HNRNPDL
ENOPH1
RCBTB2
KLC1
CENPH
NCOA5
USP10
ASCC1
ANAPC16
H2AZ1
DNAJB14
MSH6
LRIF1
ID2
RBBP6
WBP11
C12orf60
KIF2C
HSPA1L
HSPA1A
LSM2
TXNDC15
RNF146
NCAPG
GDPD3
MAPK3
MICU2
POLR3E
PMF1-BGLAP
PMF1
RPL37A
INTS5
GANAB
LENG8
PSMA3
CEBPA
MAP3K21
MAD1L1
NUDT1
MRM2
TMED4
DDX56
SPTAN1
MTRNR2L8
H2AZ2
UFL1
BRD2
ATP1A1
TSC22D2
NXF1
NFKBIL1
DDX39B
ATP6V1G2
ZSWIM7
TTC19
IER5
AMZ2
MSX1
MPZL1
BCLAF1
RPSA
USP1
IFIT3
ADPGK
HERPUD1
SP1
DYNLL1
GGPS1
ARID4B
ZBTB11
RPL24
CDK12
SRSF9
TEX30
SOAT1
SLC22A4
HDHD3
RPL22L1
SLC20A1
PUM2
CLSPN
HFM1
BUB3
HMX2
MTF1
EXOSC9
PUM1
EPC2
WDR35
NGB
HACD3
ING3
MTMR2
NEK4
ITIH1
EZR
PTPN6
C12orf57
PCIF1
FDXR
ATF3
RGPD1
RGPD2
CKB
TRMT61A
ZWILCH
SNAPC5
RPL4
UMPS
RPL13
ADAM17
HMGB2
TRIM7
UCHL1
MESP1
PPP6R2
TCTE3
ERMARD
DNAJC25-GNG10
DNAJC25
LRCH3
CLN5
GLS
RBM15B
MANF
RPL10A
SLIT2
ISL2
IL4I1
NUP62
ATF5
FTL
DNAH14
ZBED4
NDEL1
PHGDH
INTS7
DTL
PPY
THAP9
SEC31A
ARF6
DDX19B
AARS1
RTL10
GNB1L
MRPL17
HINFP
LEFTY1
TMEM63A
RPL29
PABPC1
KANSL2
THUMPD2
DPY30
FBF1
EPC1
ZNF830
CCT6B
PRMT2
UBA2
ANKRD13C
TARS3
DMWD
CSNK1E
TSNAX
TTLL12
DDIT4
TUBGCP3
PMPCA
ENTR1
SIL1
MAN2C1
HSP90B1
MFSD14A
ZCCHC17
SNRNP40
RPAP2
GLMN
CBY3
ZBTB25
ZBTB1
SLC16A1
BOD1L1
HIRIP3
HNRNPR
PCBP1
CHIC2
ZMYM1
HOXD12
EVX2
HOXD13
TLE3
TMSB10
COX20
PIGF
CRIPT
ADAMTS1
GNA13
CSRNP2
RPL12
LRSAM1
CD164
EXOC7
BPHL
TUSC1
RAP1GDS1
MSRB2
RPS7
PRADC1
CCT7
TMEM39B
DNMT1
COMMD6
ZNF627
FASN
YWHAH
C22orf24
PELP1
ARRB2
ZBTB2
BTG1
MRPS21
ZYG11B
FTH1
ZKSCAN2
ATXN2L
RPS19
NUP188
DOLK
HSPA8
SLC25A3
RBMXL1
KYAT3
CASP3
DHX15
PRKACB
SLC5A3
MRPS6
CYCS
CCDC137
POLR2J2
PDE6G
SLC35E2A
SOX4
POLR3B
EPM2A
LRRC37A3
SURF2
SURF1
RPL7A
MED22
PDSS2
ADM
PHF14
FAM89A
ACTN4
MCM5
LAG3
CPT2
SETD9
PTMS
SLC25A19
TAOK2
C7orf25
TOMM20
AKR1A1
RBM34
ZNF131
USP25
MATR3
URB2
TAF5L
MACROH2A1
STT3B
PIP4K2B
ATP2A2
SLC3A2
SLC7A5
NEFL
TOB2
RXFP4
KHDC4
CANX
HES1
VPS37B
MIF
CANT1
SRP68
ZACN
GALR2
ING5
PAN2
IL23A
MAGI3
FAM117B
SCAF4
AKAP7
RPLP0
GCN1
MRPL40
HIRA
MYL6B
MYL6
SLC26A2
YEATS4
SLC25A4
NSUN4
USP38
TTC32
HSPA6
TEX14
RAD51C
SMURF2
ZMYND15
MED11
CXCL16
DNAJB1
ARL1
C22orf39
REEP5
IP6K1
C15orf61
ATXN7L2
CYB561D1
ZFAND5
SAE1
SUMF2
GPATCH3
SRSF4
CSDE1
PRPF38B
CDC20
ELOVL1
BORCS6
CKS2
SECISBP2
MCM7
AP4M1
SLC33A1
TBC1D22A
TM9SF4
ZNF3
COPS6
SZT2
MED8
SLC39A10
PRDX3
EZH2
SREBF1
RBM8A
PEX11B
RPL9
LIAS
RNF149
PPP1R8
RPL23
CLNS1A
H4C8
NPIPA3
NPIPA2
PLA2G10
OSTM1
ILKAP
NAV2
SMIM13
MPI
ARL6IP1
LUC7L3
MDM2
BCAS4
ADI1
RPS15A
NTMT1
C9orf50
ATG16L2
NCKIPSD
RASSF1
RPS3
ZMYND10
SLC35F5
TUSC2
LDHA
DNAJC27
ERO1B
GAPDH
TCAIM
H4C3
H1-6
NT5DC1
TIPIN
USP24
MOB4
LATS1
TMEM129
TACC3
SLBP
BCL2L13
ATP6V1E1
MYO1G
TRIM13
CSE1L
TBC1D2B
IFNAR1
OGFR
CDKN2AIPNL
RANBP2
EIF3A
SLC16A10
MBOAT2
PRPSAP2
NARF
CYBC1
TRIM65
MRPL38
ZNF589
PSMG3
STIL
MAP3K3
KEAP1
UCHL3
C21orf91
OLA1
PPP1R27
MCRIP1
UHRF1BP1L
ANKRD31
NMT1
DCAKD
PYCR2
TSEN34
PRPF4
CDC26
MAP4K1
EIF3K
ZDHHC14
NSRP1
THNSL1
MEF2A
GTF2A1
UBE2Z
ZC3H4
PARN
BFAR
SLC25A11
RNF167
PFN1
ACACA
FOXO3
TADA2A
GP1BA
NDUFS7
H2BC21
H2AC21
H2AC20
XPO1
ENO1
BMP2K
HACL1
BTD
ALG6
TBC1D4
POLE3
C9orf43
ALAD
UBAP2L
C1orf43
MRFAP1L1
BLOC1S4
ING1
CARS2
IREB2
POU4F1
SNRNP70
USP39
C2orf68
KIF5C
TMEM150A
SEC14L1
SGTA
THOP1
CD320
DBNDD2
NBPF1
EIF3L
ANKRD54
MLLT11
GABPB2
HASPIN
PPP6R1
SQSTM1
MRPS14
TMEM116
ERP29
SMARCC1
ZSCAN12
ENAH
H4-16
H2AJ
NAXE
GPATCH4
NUCB2
UGT1A4
UGT1A3
KMT5B
SELENOW
PITRM1
PCDH9
TNRC6B
ARL15
FARP2
LZTR1
C10orf143
TNKS2
PHF2
RACK1
SRRM1
DIS3L
SP2
IPO7
FBXW2
TOE1
MUTYH
MSTO1
ZNF326
ANXA11
LYPLAL1
CCDC136
OPN1SW
FAM133B
PMPCB
IMMT
MRPL35
MVK
EXOSC10
CNOT11
NPM1
PCGF6
HEATR1
SF3B1
PSMA4
ZC3H6
DIP2A
MRPS15
SPRYD3
RPP38
ACBD7
ADIPOR2
MAP2K2
TRIM26
HYLS1
GEMIN4
VIM
RNF130
CCSER1
TBX2
VARS2
GTF2H4
MRPL39
OSCP1
BTBD1
RNF135
DDX6
SIN3B
TIMM44
ZNF574
GRIK5
CKAP2
VPS36
TIMELESS
MIP
TRAP1
HMGN1
MUC1
RAB13
RBSN
RPS13
RPS27
NUCKS1
HNRNPU
UBTD1
MMS19
PRRC2C
ZFP36L2
HNRNPD
MYDGF
TRIM25
MICOS10-NBL1
MICOS10
TNFRSF10B
TMX1
CSK
POLR2E
GPX4
CWC25
ZNF839
CDC6
SLC25A36
RPS24
POLR3A
THAP6
INTS3
SNRNP25
POLR3K
RPF2
CDR2
TXN
ZNHIT6
PPP1R12C
USP48
C2orf42
PUS7
RINT1
C16orf95
FAM162A
CCDC58
FER
SIRT1
PRMT5
PCMT1
RASA2
RPRD2
TNIP2
AUH
WNK1
PTBP1
PSTK
TNPO1
ZDHHC7
TPRA1
MCM2
ZNF282
RNF19B
TARBP1
KAT7
METTL23
TMEM128
JMJD6
NRDC
SERTAD2
BSG
KNL1