ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244177 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◣ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

HIKESHI
NAA80
IFRD2
HYAL3
BOD1
PHB
NPRL2
TMEM115
CYB561D2
TMTC3
CEP290
TCEA2
CLPB
FASTKD1
PAFAH2
CALR3
C19orf44
CALCOCO1
SMPD3
PPRC1
ORMDL3
GSDMB
CCP110
GPBAR1
PNKD
AAMP
UBE2T
PPP1R12B
DEXI
CLEC16A
ZNF225
INVS
ERP44
DDX23
PANK4
HES5
COX7C
ST3GAL2
TTC13
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
ZNF189
MRPL50
STAU1
CHMP4B
ODF3L2
MADCAM1
MED15
LARS1
SCRIB
TESK2
MMACHC
CCDC163
UBAC1
ZNF749
ZFYVE28
CFAP99
UCKL1
RPIA
CTF1
BCL7C
BTRC
GSPT1
SLC39A1
CREB3L4
CRTC2
SYMPK
FOXA3
KBTBD6
CTU1
TSNAXIP1
RANBP10
SLC35B4
TTC33
AHCYL2
NTAN1
NUDCD1
PPP1R12C
MRI1
C19orf53
ZNF517
ZNF34
RPL8
NOP14
GRK4
STK25
PYCR3
GFUS
WDR87
SIPA1L3
C1orf159
ARHGAP35
AP2S1
TNFAIP1
IFT20
ZNF169
CBARP
MIDN
ATP5F1D
CHPF2
ABCF2
PEMT
TMEM127
CIAO1
ING4
UNKL
C16orf91
PERCC1
SV2A
BOLA1
TMEM208
LRRC29
MAD2L1BP
GTPBP2
ZNF513
SNX17
EIF2B4
ZSCAN22
ATP5PO
TRAPPC3
MAP7D1
ZFYVE1
TFEB
RPL36
MICOS13
HSD11B1L
ZNF235
PHF12
BUB1B
RASSF1
ZMYND10
TMEM59
ZNF56
ZNF420
SMUG1
UNK
H3-3B
KBTBD7
TSC2
NTHL1
WNK1
RALBP1
UBQLN4
LAMTOR2
DYNC1I2
SMARCAL1
TSSC4
GATB
BANP
HDGF
MRPL24
SLC4A2
CDK5
ASIC3
TIMM21
FBXO15
SNX27
CNIH4
NFXL1
FBXO46
MEIOSIN
AP2M1
TRAK2
STRADB
ZNF337
THRAP3
OSCAR
NDUFA3
ZFYVE19
DNAJC17
NDUFS2
ADAMTS4
SCAF1
RRAS
ZNF444
PHF13
LETM1
DESI2
VCPIP1
C8orf44-SGK3
CCDC146
TTBK1
ZNF224
RPS2
RNF151
TBL3
NOXO1
SIRT2
NFKBIB
ZNF384
RIC8B
SLMAP
UFSP2
C4orf47
MYLK4
WRNIP1
ING3
PEX26
HTRA2
DQX1
ZC3H11A
ZBED6
LMNB2
UBR2
FEM1A
POLR2E
GPX4
EMILIN1
OST4
KHK
CCDC150
ZNF350
NUDT13
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
RAB1A
BUB3
HMX2
CNOT1
CLP1
YPEL4
ZNF514
ZNF2
TMEM70
ELOC
B3GALNT2
PSMD11
STK17A
SERPINI1
PDCD10
DSTYK
SOX6
C11orf58
IPPK
ZNF554
TMEM101
ZNF230
PRCC
SEPTIN9
TFPT
PRPF31
CCDC90B
CTDP1
RPGRIP1L
FTO
JOSD2
ASPDH
ZNF37A
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
CAPN15
GPKOW
YPEL3
TBX6
ZNF862
NMT1
DCAKD
RPS7
VIPAS39
AHSA1
NDUFB5
MRPL47
MARS1
ARHGAP9
CCDC174
INTS9
HMBOX1
USP48
PANK3
FBXW11
WDPCP
MDH1
VARS2
GTF2H4
FBXO48
APLF
SLC25A19
WAPL
FAM185A
INTS1
CDK5RAP2
PTDSS2
ANO9
VPS50
HEPACAM2
RABAC1
RTN2
TTC1
MXI1
NFKBIL1
DDX39B
ATP6V1G2
THYN1
ACAD8
PEX14
DFFA
EMP3
CCDC114
TRAF7
RAB26
CNOT4
ZW10
CLDN25
RAB5C
RANGAP1
SSR2
PRRG2
NOSIP
RPS6KB2
PTPRCAP
GPR15
CLDND1
MED27
AKIRIN2
ZNF547
TRAPPC2B
SSR3
ZBTB7A
CWC22
PIGU
RAB13
RPS27
TMEM69
GPBP1L1
TMEM43
CHCHD4
SAMD1
C19orf67
MISP3
ZGPAT
ARFRP1
VAPA
SEC61A1
AURKAIP1
IGSF8
SCAMP4
ADAT3
CHCHD3
RPS20
TIMM13
KMT2B
FHL3
UTP11
ZNF419
ZNF772
PGBD4
EMC7
FHIT
SUFU
ACTR1A
ZNF226
PA2G4
RPL18A
RALGAPA2
ZNF484
ZNF32
GPAA1
EXOSC4
ZNF25
TOR1AIP2
TOR1AIP1
PCM1
CLDN6
TNFRSF12A
THOC6
HCFC1R1
TMEM160
BICD2
KAT7
TMEM245
PSMD2
WBP2
RBM6
MON1A
DDX49
COPE
METTL3
LEMD2
GABARAP
PHF23
DVL2
PHB2
AHCTF1
NUP153
MRPL20
CCNL2
PSMC4
EIF1B
RAB30
SPHK2
RPL18
FAM83E
PNPLA6
PRR14
FBRS
SSBP1
ZNF527
SDCCAG8
CEP170
SYPL1
MBD1
CXXC1
SLC50A1
DPM3
PDE6D
COPS7B
PSMD4
VPS4B
MAX
ENOX2
UBL7
PKLR
FDPS
GID4
ATPAF2
ZNF354A
CIAO3
TMEM186
PMM2
USP35
KCTD21
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
BIRC5
SCAMP3
FAM189B
NCDN
KIAA0319L
UBE2Q1
CHRNB2
TXNDC9
EIF5B
FBXL19
SYNGR4
PRR5L
COMMD9
DDX47
USP31
RPS3
BOLA2-SMG1P6
UCHL5
RO60
ZCCHC8
HIRIP3
SCRT1
DGAT1
GPR108
TRIP10
SNRPE
CFAP410
FAM193A
S1PR4
NCLN
ZNF140
NOLC1
SEC11C
EIF3C
EIF3CL
METTL26
WFIKKN1
CARS1
ZNF133
PSMB4
TOR2A
MUS81
CFL1
RAB29
ZNF586
PTBP1
PIH1D1
ALDH16A1
SLC17A7
SLC38A9
NKIRAS1
RPL15
ZNF764
WDR53
FBXO45
SNX1
CIAO2A
DCAF1
ADSS2
CATSPERE
PSMD3
BOD1L1
ZNF584
NEK8
RPL23A
RAB34
TLCD1
PROCA1
RPS13
GINS3
MAF1
CYC1
WDR97
CRK
ZNF599
L3MBTL2
ZCCHC4
RAD51AP2
LIN37
PROSER3
HSPB6
PSENEN
RPL34
NUF2
LTA4H
BET1
RPP40
OPA1
SMN2
SMN1
ZNF26
RPS3A
ABCC5
TLE3
ZNF227
ZNF567
EIF2S2
CAPN10
DNM1L
TERF2
LUC7L
FAM234A
ZNF500
TMEM199
SEBOX
POLDIP2
XPOT
MGRN1
UBALD1
CDCA8
C1orf109
ZNF343
NCBP2AS2
NCBP2
WASHC3
RETSAT
MITF
NAT14
ZNF628
CCNT2
ABRAXAS2
EEF1AKMT2
EXOC4
HSP90B1
STRN
WBP1
INO80B
TRMT1L
SWT1
ZNF451
GEMIN6
TRABD
CAPG
SH2D6
COG2
TPGS1
RAB7A
RPS26
ZNF768
ZNF747
C1orf54
APH1A
TMED9
B4GALT7
RAB3C
PPP6C
ZNF805
AURKC
OAZ3
MRPL9
LRFN3
SNAPIN
ZNF776
BRD3
VMO1
PSMB6
GLTPD2
CLPP
FAM222A
HSPA13
ZNF277
DOCK4
ASXL1
DPP9
ZNF17
SERP1
EIF2A
TSACC
CCT3
SKIV2L
NELFE
FBXL18
SHLD1
KBTBD8
CSRNP2
TRUB1
UBA1
ZMAT5
UQCR10
RACGAP1
BLOC1S5
THAP1
DCP1A
CAND1
ZMYND15
MED11
CXCL16
ZNF585A
COPS7A
DPH2
B4GALT2
ATP6V0B
PPP1R7
PASK
RXFP4
KHDC4
IPO8
THAP11
NUTF2
CENPT
SF3B2
GAL3ST3
GFM1
RAB8B
CWC25
GPT2
C7orf25
BDP1
UBE2N
USHBP1
BABAM1
POLRMT
FGF22
PPP1R13L
POLR1G
RAD52
ZNF773
KATNB1
EML6
CCAR2
C8orf58
ZNF684
TMEM33
CHCHD6
MVB12A
NARS1
WASF1
CDC40
DBP
CA11
AP2B1
PEX12
CDK8
ZNF180
PES1
ZNF416
ZIK1
BRIX1
MED23
ENPP3
RNASEH2C
KAT5
NOP53
QTRT2
CCDC191
CNOT6
GPR137
INTS4
HEXIM2
ZNF436
MORF4L1
UCK1
ELP6
SCYL3
ZNF134
GSC2
WIZ
NME1-NME2
NME1
PARK7
TMEM88
NAA38
CYB5D1
CMPK1
SKP2
LMBRD2
TOR1A
NUP205
MACC1
CCNL1
STMN3
RTEL1
ACLY
CANT1
UBA52
FAM228B
TP53I3
SF3B6
GAPVD1
LSG1
POLR2J3
SUGP1
MAU2
IFRD1
CLINT1
SLC33A1
DARS2
CENPL
ILF3
MYBL1
PRKCSH
CCDC151
RPL37
CARD6
KCTD5
ZNF548
PUS3
DDX25
CNPY2
ITPR1
MRPS16
DNAJC9
TM9SF4
OSBPL11
SH2D3C
CDK9
RRP36
MEA1
KLHDC3
RGL2
PFDN6
WDR46
MAP3K13
DEDD
AQR
DMAC1
COPS8
TMEM94
TTLL11
ZDHHC16
EXOSC1
SASS6
EMSY
TOMM22
TPR
ODR4
MTA2
TUT1
RBL1
NDUFS7
POMZP3
DYNC2LI1
SF3A3
CAMLG
TMEM222
ESCO2
AKAP8
C12orf43
ZNF45
MRPS15
VEZT
FGD6
CD2BP2
TIMM23
ZSWIM9
LIG1
CUEDC2
EIF2D
FAM149B1
ECD
USP15
MTR
ZBTB45
SLC27A5
PCNA
TMEM230
GGPS1
ARID4B
SZRD1
FIS1
CLDN15
BIVM-ERCC5
POGLUT2
BIVM
FBXO9
CILK1
NDUFS3
KBTBD4
FAM180B
TRMT2A
RANBP1
PRDX2
RNASEH2A
SART1
NUMA1
LRTOMT
PIP5KL1
DPM2
RBL2
PNKP
AKT1S1
TBC1D17
ALG10
ZNF417
NDUFV1
PRR22
DUS3L
TSNAX
C8orf33
WDTC1
MRPL54
APBA3
RAX2
TOGARAM1
KLHL28
SNIP1
DNALI1
VRK1
RWDD1
ZSCAN32
ZNF174
ZNF460
HPS6
ARMH3
GALM
IPO7
ALG10B
ZNF324B
WDR18
SMIM30
ZNF721
PIGG
CDC34
CTNNBL1
DNAJC28
TMEM214
ZC3H10
RPL41
ESYT1
IPO13
THRA
MED24
RPL29
ZNF530
THAP4
ATG4B
SLC37A3
RAB19
SLC25A44
JTB
COA3
CNTD1
DHX33
R3HCC1L
ZNF668
ZNF646
C15orf40
UBE2J2
FAM53C
CDC25C
FBXO38
ZNF101
ATP13A1
CCDC124
DTX2
UBE4A
TMEM109
PRPF19
ECHS1
DNAJC11
ZNF317
PGAM1
ZNF155
SAP30
CEP350
ARHGEF1
CD79A
CCDC117
GSK3A
UBE2V1
UBE2D1
DHX30
EIF3D
TSN
LRPAP1
HBP1
FCSK
TXNL4B
DHX38
STXBP2
XAB2
PCP2
PHLPP1
SMIM13
RPS19
ZNF268
CLPTM1L
ERF
RPL12
LRSAM1
SEL1L
CCDC77
MAMSTR
SERBP1
PSMA2
MRPL32
API5
MAP1LC3B
FBXO31
PUM3
PURB
ZNF446
ZNF324
ZNF550
CBR4
TMEM147
TMEM129
TACC3
SLBP
DNAJB6
FBF1
ZNF211
ZNF221
VAMP7
ACP6
SHPK
CTNS
AMT
NICN1
FOXJ3
FAM166A
STPG3
MRPL19
NELFB
SETDB1
RPL22
RNF207
XRRA1
SPCS2
PCBP2
ZNF286A
LRRC47
N4BP2L2
AMD1
CDK19
NFATC3
VPS45
SDF4
B3GALT6
DOHH
FZR1
ELOB
PDF
NIP7
COG8
SESN1
SNAP47
JMJD4
TCTEX1D4
BTBD19
CEP57L1
SLC25A10
MRPL12
ZMAT2
HARS2
HARS1
NDUFB10
RPL3L
EIF3F
LAMTOR3
OLFML2A
NR6A1
DMAP1
C8orf76
AP5S1
GALK2
COPS2
PNISR
VKORC1
PRSS53
SUCLG1
ZNF304
TP73
WRAP73