ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20230570 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◣ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

LRP6
KMT5B
CALM1
CTNNB1
CLTC
B4GALNT3
MTF2
BRWD1
ATAD2
ZC3H6
NOTCH2NLC
DOLPP1
DDIT4
MXD4
NOTCH2
CALM2
KPNB1
CALM3
PPP5D1
NOTCH2NLA
CCDC88A
TMEM41A
CCNL1
NXF1
PHIP
HEXIM2
SOD2
WTAP
PNRC2
CKS2
SECISBP2
STX18
ARNTL
MRPL21
IGHMBP2
PIK3IP1
MRM3
GLOD4
LAMP1
PRKACA
UBC
KDM4B
DIP2A
SSNA1
ANAPC2
ZFAND2A
KMT2D
RHEBL1
SPATC1L
TRIP12
FBXO36
EIF2D
PKM
NCBP2AS2
NCBP2
TCF3
TOB2
NOTCH2NLB
MCM7
AP4M1
NAGPA
SNRNP70
CYP51A1
PDE6D
COPS7B
ADNP
RPS2
RNF151
TBL3
NOXO1
ENDOV
RERE
RCL1
ATG14
ADK
SESN3
CHD2
MRTO4
EMC1
IST1
PNRC1
HEXA
TSPYL2
SEC13
ZKSCAN2
TAF5
TMEM222
TSC1
GFI1B
GPAM
KCNIP2
PCID2
CUL4A
DYRK1B
WASHC2A
WASHC2C
KCTD9
CDCA2
CYCS
HAGH
FAHD1
RPLP1
UBQLN1
SPATA25
NEURL2
CTSA
ZSWIM1
PIK3R3
NBPF1
MANF
RBM15B
UBE2D3
PEPD
GHITM
PBLD
HNRNPH3
SPRYD3
ADPGK
DSTYK
ARF4
IPO11
DIMT1
PRTG
ARHGEF12
HOXD9
HOXD8
H2AX
DPAGT1
HMBS
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZNF212
PSMD3
UBE2B
CDKL3
PI4K2A
MORN4
CORO7-PAM16
CORO7
DNAJA3
SPRED1
MRPL58
TSN
LAT
SPNS1
VCP
FANCG
IER5
WDR25
WARS1
CASC3
CCDC77
KDM5A
RCOR3
TBCB
POLR2I
OVOL3
YPEL2
PDCD4
COQ9
CIAPIN1
APTX
DNAJA1
MYLIP
VPS37A
CNOT7
HSP90AB1
UBN1
GLYR1
MSMO1
ATXN2L
HMGCL
FUS
TIMM22
TRIAP1
COX6A1
MCU
SRSF6
DOHH
FZR1
HERPUD1
UBALD2
ZSWIM7
TTC19
TMA7
CCDC51
ATRIP
TOMM22
IP6K2
MVD
OPA1
EIF4A2
TCF12
TMEM199
SEBOX
POLDIP2
WDR53
FBXO45
PINX1
DDX23
COPS8
SP2
MTMR2
SCGB1C2
GTF2H3
EIF2B1
WASHC5
NSMCE2
POMZP3
OAZ1
ACSL3
TOB1
KDM4A
USP42
RCOR1
NMNAT1
LZIC
CALR
RAD23A
SMN2
SMN1
AMIGO3
GMPPB
FRA10AC1
HNRNPAB
NUP214
TIMM50
POLR3D
FBF1
TULP3
PPIL4
HMGB1
USPL1
RASEF
C8orf33
SUMF1
STX16
POLR2J3
DPP8
NUDT15
VAMP2
PER1
POLG2
DDX5
HOXD10
AMD1
NABP1
TAOK2
IDI1
WDR37
TOP2B
COQ7
FOXJ3
TMEM88
KDM6B
TXN2
RPS28
NDUFA7
NLK
MRPL4
AJUBA
ZWILCH
SNAPC5
RPL4
CCDC134
RBM42
AP5Z1
MRPS35
MYBL2
MFN2
FDFT1
TMEM104
NAT9
ZNF721
PIGG
PPT1
RFX3
USP30
TARBP2
MAP3K12
NPFF
DUS2
DPEP2NB
DDX28
DIABLO
PGP
E4F1
MLST8
BRICD5
PSTK
SCGB1C1
ODF3
FAM207A
TNKS
DNAJB12
SYNGAP1
CUTA
PHF1
GTF3C5
NUP188
DOLK
GTF2IRD2B
MARCHF8
H2BC21
H2AC21
H2AC20
GABPB1
MAN1A2
FAM180B
NDUFS3
KBTBD4
SARAF
RPL22
RNF207
PSPH
CCT6A
VDAC2
TEDC1
CRIP1
DDAH1
CCN1
YWHAQ
PACSIN2
CNP
MRPS16
DNAJC9
TBCCD1
DNAJB11
RPLP0
GCN1
ZFAND4
DCP1A
PARL
ZNF839
HNRNPL
ID2
EIF3F
ZNF148
ATF4
NOC4L
DDX51
AMOTL2
LMTK2
UHMK1
PELP1
ARRB2
TAF15
APLP2
CRBN
DIP2B
FEM1C
RLF
LONP1
CATSPERD
CDH1
SLC44A2
PCIF1
EIF3A
JPT1
CLDN6
TNFRSF12A
THOC6
HCFC1R1
SFR1
ECSIT
CNN1
AURKAIP1
CDK11B
ZC3H3
CTDP1
TEPSIN
NDUFAF8
DCAF8
ZNF337
VCPKMT
RPS5
POLR3E
GOLGA1
CCNG2
PALB2
DCTN5
ATG7
WDR43
SRSF2
MFSD11
METTL23
FAM131A
WDR81
TLCD2
TFRC
SLC38A2
TDRKH
GET3
NFYC
C16orf89
ALG1
SLC9A3R1
CCDC130
LNPK
TIMM21
FBXO15
ARRDC4
CDKN2AIPNL
ARHGAP19
TMEM79
SMG5
ATAD3B
RRBP1
FAM53C
CDC25C
PACSIN3
ARFGAP2
RUBCN
MICU2
CFAP410
DDX50
ARHGEF7
ULK2
EIF1
NDUFS7
SUMF2
TPM1
PTPN6
C12orf57
COMMD1
CCT4
CACTIN
PKN2
ATN1
GXYLT1
PRDX1
GABARAP
TTC4
ELP5
CTDNEP1
ETNK1
CLDN7
MEF2D
MRPS15
MRPL39
EEF2
SLC25A28
PTP4A1
CDKN2C
FAF1
ATP8B1
CMTR1
ZER1
CLCN7
RPSA
CEP192
EIF5
ABRAXAS2
EEF1AKMT2
GIPC1
C19orf48
GSTO2
ATP5F1A
C4B_2
C4B
STK19
LOC110384692
DXO
C4A
TXNDC15
RAB4B
MIA
TMEM217
TBC1D22B
LATS1
GTF2I
TMEM128
TK1
TPRN
TMEM203
NDOR1
FARSA
COQ8A
IER5L
SMPD4
MZT2B
GTF2B
LANCL2
DNAJB1
TECR
COQ10A
ANKRD52
FAM204A
YEATS4
EPHB3
EDF1
TRMT61B
RNASEH2C
KAT5
DYNLL1
PHAX
ALDH7A1
STX6
PPP1CA
RAD9A
CREM
ADARB1
RHNO1
FOXM1
OAZ3
MRPL9
CAPN10
ZNF518A
TFDP2
BECN1
PSME3
KLF10
CABIN1
ATP9B
RPS3
CNOT1
PARPBP
NUP37
TENT5C
NOP14
GRK4
SUCO
PANK2
ANXA7
STARD7
KLF5
SLC2A1
NDUFB8
HIF1AN
PRSS22
VAMP1
TMPO
ATP6V1C1
MRPL20
CCNL2
CFAP20
THOC3
CRY2
SH3GL2
DBNDD2
ACAD9
RRP7A
MTHFD2
RUSC2
PEX3
ADAT2
XPO4
VCL
MARK3
UQCRC1
H2BC5
H1-4
PCNA
TMEM230
SHBG
FXR2
HMGCS1
MRTFA
UNK
H3-3B
AARS2
ZNF398
ZNF425
PCCB
DPP9
ZNF124
C6orf226
SRSF11
LRRC40
POLG
SF3A1
CCDC157
PTEN
KLLN
TMEM42
IL4I1
NUP62
ATF5
TAF1B
ZBTB20
DDX1
GNB2
ZFAND5
ELF1
WBP4
TMEM262
ZFPL1
CDCA5
C6orf132
WDR61
SRRD
HPS4
WSB1
SPOUT1
CSRNP2
TOP3B
HSP90B1
DCAF10
ZNF594
HDAC4
NRL
SLC25A42
PCK2
TSNAXIP1
RANBP10
FBXW2
NDUFV1
GARS1
DEXI
CLEC16A
NSFL1C
CHCHD1
FUT11
ASF1B
SLC35B1
SFPQ
RNASEK
C17orf49
ABAT
BCL6B
TDRD9
ATP5MPL
NEK9
RPS26
GID4
ATPAF2
STAT1
ASCC1
ANAPC16
CCT2
SLC25A38
PITPNM1
SERTAD1
PRX
SMIM13
EXOSC8
ALG5
VRK2
BCKDHB
ANKRD17
RNASEH1
TEDDM1
GLUL
SURF6
PGAM1
LDHA
SNX13
FOS
UBB
MRPS7
MIF4GD
GGA3
TRMU
FRG2C
PSMD8
PDK2
FAR1
NOM1
STRIP2
NBN
SETD1A
ORAI3
RAD50
EFCAB2
LRRC57
HAUS2
HOMEZ
ASNS
PFDN2
NIT1
CLIC4
PLEKHM3
MRPL37
CYB5RL
PIGU
TIMM44
NDUFAB1
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
UBIAD1
C14orf93
RANBP2
ATP6V0D1
AGRP
THBS1
ZNF517
ZNF34
RPL8
C10orf143
ICE2
LGMN
STARD4
SPTLC1
STIP1
TEKT2
ADPRS
FBXO24
LRCH4
FAM161B
COQ6
PPRC1
SFSWAP
TSEN54
CASKIN2
LLGL2
KPTN
NOCT
MALSU1
RPS6KB2
PTPRCAP
WDHD1
SOCS4
ZFP1
PRRT2
MAZ
TPP2
LUC7L
FAM234A
NAGK
SIVA1
CEP55
FAM133B
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
SMIM12
ACTB
SLC39A5
RNF41
NABP2
PMPCA
ENTR1
SMIM41
ATG101
MON2
BLOC1S2
LASP1
ZBTB45
SLC27A5
KCTD7
LRCH3
TBRG4
BICD1
HTRA2
DQX1
VPS33A
MAN2C1
TIPARP
ORMDL3
GSDMB
MKNK2
AVPI1
GRHL2
PSMD6
MTG1
H3C13
H2BC18
RAB8A
DNAJC3
NDUFAF3
IMPDH2
DALRD3
TAGLN2
FNIP1
REXO1
NOL7
PLAG1
CHCHD7
ANAPC1
RPUSD4
FAM118B
ARL6IP1
SCFD1
ZNF672
IARS1
HDAC10
TUBGCP6
TIGAR
SPRYD4
HBS1L
WDR6
PHF5A
ACO2
MCCC1
METTL9
KHSRP
RPP38
ACBD7
MAPKAPK5
MRPL40
HIRA
PCNX4
ZBTB8OS
RBBP4
HSPA1L
HSPA1A
LSM2
PCDH9
SRPRA
CNTRL
C5
TIFA
PPP2R3B
CAPZA2
SUPV3L1
RTF2
TOMM40
CZIB
CFAP43
CCNA2
YIF1A
TMEM151A
PAK4
GCHFR
RMDN3
CAAP1
ZNF775
ZC3H10
RPL41
ESYT1
HPS5
GTF2H1
H1-10
GLG1
SCNN1A
LTBR
MFSD14A
SH3GLB2
MIGA2
HES1
PCBP2
ALDH3A2
CHPF2
ABCF2
TRIP4
PCLAF
WDR4
INO80
KHDRBS1
TMEM109
PRPF19
PITRM1
PHF23
DVL2
EXT1
CNIH3
SENP2
ATXN2
MMAA
SNRPD1
C2orf69
DOK7
PALLD
RPL17-C18orf32
RPL17
C18orf32
TRIM13
EXO5
GADD45G
EPN1
DCP1B
ACOX3
TRMT44
TOP3A
SMCR8
DCPS
SNAPC3
CANX
CALU
HSPE1-MOB4
HSPE1
HSPD1
PPP4R3A
NTMT1
C9orf50
MATR3
MARCHF3
BOD1L1
EHD4
ING5
NCL
SGSM3
DLG4
ACADVL
RBM4B
SLC7A6OS
PRMT7
DPY19L4
CLN8
C4orf36
GPX1
ANXA2
WFDC3
DNTTIP1
MAP4
ATXN7L2
CYB561D1
SYCE2
EXOSC6
ATF3
FEM1A
SELENOI
ADGRF3
C16orf95
CLASRP
SPG11
PGM2
STYXL1
MAGEF1
SC5D
DNAJC10
FLYWCH1
FAM71E1
EMC10
FREM2
EIF2B5
TMEM170A
SHC1
TPT1
AFF1
BUD13
PYGO2
PBXIP1
LOC101928120
SMIM10L1
PRH1-TAS2R14
NARF
CYBC1
MAML3
HACD2
CNBP
PDF
NIP7
COG8
NELFA
SRSF10
UBL5
PIN1
LPCAT3
BRIX1
MSTO1
WDR18
KLHL12
FAM156A
FAM156B
RNMT
FAM210A
MED4
MVK
SRSF5
NDUFV3
SUPT5H
RPS16
RPL6
PTPN11
GPN2
ZSWIM6
USP32
RFXANK
BORCS8
CYP20A1
PA2G4
PLPBP
PDIA4
SH3BGRL3
C2orf42
TTC21B
ERCC6
POR
HGS
ARL16
C5orf51
LRRC37A3
BCL2L1
AHCTF1
COA6
UBAP2
NDUFS6
MRPL36
ACTN4
PPM1K
UBE3B
ATAD3A
RAB11FIP1
CYP11A1
DTX2
NME6
TRIM65
MRPL38
ASAH1
NKX2-5
MLF2
COG2
TIGD6