ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22001292 | DLD-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◣ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

LOC102724770
DGCR6
DUX4
H4C12
H4C11
H2BC14
H2AC14
GSTA4
H2BC15
H2AC15
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
UBC
MAMDC2
IER3
FLOT1
GULP1
KLF6
H4C2
H3C2
H2AC4
H4C1
HEXIM2
AREG
H2BC5
H1-4
CALM2
EIF2D
DRD4
BTNL9
DCP1A
H4C9
H2BC11
H2AC11
FRG2C
GDF15
LRRC25
H3C4
H2AC7
H4C5
H2BC7
PRDX1
ERRFI1
MTRNR2L1
KMT2A
EEF1A1
H3C13
H2BC18
FAM53C
CDC25C
ZBTB4
SLC35G6
POLR2A
KRT19
KRT15
EREG
H4C3
H1-6
H2BC21
H2AC21
H2AC20
ZFAND5
RGS19
OPRL1
LKAAEAR1
TMEM262
LOC102724265
GTF2IRD2B
BBC3
MTHFD2
GAPDH
ARPP19
CITED2
PKM
VRK2
HEXB
ID2
TRIB3
H2BC4
H2AC6
NT5C
ARHGAP32
PHRF1
DRG2
PMAIP1
RNF43
PPP4R3B
EGLN1
ZNF207
C17orf75
GTPBP6
NUCKS1
DDAH1
CCN1
H1-2
NECTIN4
INO80D
TMEM242
EPC1
STX16
CALM1
ZC3H11A
ZBED6
BCL9L
H2BC17
H2AC17
H3C12
TMEM68
TGS1
VWA8
ZER1
ACYP2
H2AX
DPAGT1
DCAF10
HMBS
GTF2H2C_2
GTF2H2C
ZCCHC3
C20orf96
SYDE2
TOB2
H3C1
H1-1
GTF2IRD2
ZNF341
NRL
PCK2
POLR3D
EPCAM
RCOR3
LMNB2
ACSF3
PERP
RHOB
ZNRF3
SRSF2
MFSD11
MKNK2
MED23
ENPP3
PRSS22
PTBP1
GTF2H2
COL23A1
AAR2
TMSB10
CIRBP
FAM174C
NFKBIA
KRT39
RPL18A
NOTCH2NLA
GEMIN7
ZNF296
FRG2
H4C6
H4C7
H3C7
H2BC9
TPD52
MGAT4B
LAMA3
LTC4S
PRSS23
PLEKHM3
H4-16
H2AJ
IST1
SRSF6
AMOTL2
KRT8
ZNF518A
NABP1
TUBGCP3
JUNB
STX18
TRA2B
SMAD3
TAF12
ELOB
BUD13
SDC4
PATZ1
ONECUT3
TBC1D22A
TP53BP2
MIER1
DNAI4
HNRNPA3
FLOT2
DHRS13
TNFRSF6B
FAM227B
DTWD1
GRAMD1A
P4HA1
TPI1
SPSB2
MEAK7
TMA16
SNRPG
FAM136A
LOC388282
LOC100129484
TNRC18
GBA
MYL12A
LATS1
C5orf24
UBE3C
ANXA4
TACSTD2
AFAP1
TBC1D14
ARHGEF35
PPFIBP2
TRAM2
ADPRHL1
DDIT4
GTF2A2
CASC3
PRRC2A
AIF1
SNX5
MGME1
ETS1
RORA
PRAG1
FRA10AC1
RPL10A
SRSF3
DMTF1
TMEM250
SRCAP
LOC730183
ZNF143
KRT18
MRPL44
H4C4
GADD45B
STN1
MLLT10
SKIDA1
NOXA1
KNTC1
ALDH3A1
NFIB
HIC2
INO80
ZNF292
ZNF410
HMGN2
GRHL3
CTNNB1
SLC24A1
INTS14
PSMD8
RTN4
BCAS4
TRIB1
ITGB1
ARL15
SIPA1L1
TNFSF15
HRH1
MANF
RBM15B
SLC44A2
MPHOSPH10
MCEE
KEAP1
CHAC1
MTF2
USP30
MTMR2
ZMPSTE24
SAR1B
COX18
KIF21A
ZNF609
TBX3
PNRC1
RNF220
FAM162A
CCDC58
ZC3H12C
TGFB2
XPO4
PHKB
ITFG1
DDX6
RUNDC3B
CCDC153
CRIM1
PDZD3
EAPP
GTF3C2
RBM25
TM2D1
H4C13
H3C11
H2AC16
H1-5
PIAS3
CFL2
KDM7A
KANK2
TMC1
NDUFS7
ODF3L2
MADCAM1
RMDN2
BMP4
RAD54L2
NFYC
H2BC12
H2AC12
TMEM106B
MTCH2
PFKFB3
ADAP1
DNPH1
CHD2
TUBA1B
EIF4A3
GET4
DNAJC19
TBC1D19
UGP2
PDCD2
ZC3H4
ARID3A
DYNLL2
MRPL21
IGHMBP2
PPIA
EIF1
ZBTB7B
AFF1
LHX9
C1orf53
EIF4G1
LSM14A
CBX4
ATP8B1
LDHA
RFT1
VPS35L
SPTAN1
RHBDD1
METTL15
KIF18A
RNF146
ZCCHC4
RPL5
CREBL2
TRDMT1
WSB1
ZDHHC17
ZNF706
POLR3H
NIPSNAP2
PDF
NIP7
COG8
ATP9B
DUS1L
ZBTB37
USP3
NOXO1
ATF4
BSPRY
UBE2J1
ZNF84
DARS1
USP24
TBL1XR1
ZFAND6
GFER
SYNGR3
NFKB1
FECH
ANKRD18A
GTF3C5
MCL1
UBE2S
BMF
STAG1
SUCLG2
TRIOBP
TMEM249
SLC52A2
FBXL6
TATDN3
NSL1
KMT2E
STMP1
ARID1A
H2BC6
RGS3
MTA3
TRIM55
TFF1
NME1-NME2
NME1
TERF2
PRDM15
SYK
DOCK7
NIBAN2
HUS1
FRG1
VHL
PKP4
CCDC148
DENND6A
ASB2
TMEM88B
VWA1
DLX4
FOXJ3
TOB1
SLC25A51
ERCC1
SMIM19
SLC20A2
MEMO1
HILPDA
TJP1
VPS54
FAM240C
LOC100130520
CD300H
LAMP1
COMMD1
MTIF2
TRIP11
UBE2V2
CDKN1A
ERMAP
SVBP
SHB
GATA6
NPY4R
NPY4R2
ZBTB45
SLC27A5
HSPA5
INTS12
GSTCD
SEC11A
KAT6A
TJP2
LEPROTL1
EPB41L4B
ELF3
RBM43
MUC20
KMT5B
TMEM222
ATG5
PSMA1
KDF1
EBAG9
TM2D2
ADAM9
SMC5
CEBPA
REL
SLC39A14
IL20RA
NUF2
VARS2
GTF2H4
ACTB
CDC73
ZNF76
ANKRD40
CDH1
SAV1
FUT4
YWHAH
C15orf61
ARHGAP45
C22orf24
FAT1
PLD4
RAPH1
PARP9
DTX3L
BANP
MYLIP
ZNF770
EIF4G2
PCBP1
CA5A
ARHGEF38
HMGB1
WDR11
ZSWIM7
TTC19
MRPS31
HOMER1
BCL3
FANCL
PCBD1
PAK6
CAV1
EIF4A2
PSMF1
ACTRT3
MYNN
HNRNPF
ZNF286A
BCL2L1
CREBZF
PAIP1
SH3RF1
CMTM8
SEC13
AURKAIP1
RPS3
REXO4
ADAMTS13
MFF
C6orf62
ZFP62
PTDSS1
MTERF3
PSMC1
KAZALD1
ZBTB38
TGFA
ITPRID2
RALGAPA1
SEC24D
TMEM41A
GPN2
RPL27A
ZBTB26
RABGAP1
KATNBL1
UFL1
MAP2K2
LNPEP
TMEM216
GADD45GIP1
AAK1
EPN2
PATL2
WDR74
STX5
HERPUD1
SLC38A2
MRPL1
MTHFD1L
EZR
NFAT5
USP34
SMCHD1
AHR
UBE2E3
SPRY2
SLC16A5
PPL
LRP5
EPHB2
LRP6
NSFL1C
SLC44A1
IPO9
CCDC7
BTG1
DEK
CHMP6
ACTR3C
CEBPB
LRRC61
IFITM1
IFITM2
IFITM5
RPS5
RNF225
SLC35A3
CTDSP1
SOCS5
MTHFS
DISP1
PDE2A
PAQR5
WSB2
SLCO1B3-SLCO1B7
SLCO1B3
ZNF789
ATP5MF-PTCD1
ATP5MF
USPL1
BRIX1
CCT4
EIF2S2
MRPL3
CIAO3
UQCC3
LBHD1
CSKMT
C11orf98
SELENOT
HEBP2
TMEM45A
ARHGEF5
F3
CLU
KLRC2
OR10V1
SOD2
WTAP
CHCHD1
PTEN
KLLN
FUT11
KIAA0232
NR4A3
ARL5A
SNTB2
SOCS1
IGF2R
VWA7
ACOT2
BOD1L1
CGGBP1
SLC25A3
C14orf93
SP1
C3orf38
TACC1
C4orf36
TCF20
PSMC6
ITGB6
TM4SF1
DNAJC11
CD68
EIF4A1
EXOSC8
ALG5
ZFP36
PLEKHG2
XBP1
SRSF4
H1-3
H3C6
UAP1L1
NAPEPLD
MAN1B1
PXT1
KCTD20
TMEM95
KCTD11
PAK1
IRS1
DBF4B
GOLGA7B
SRSF1
RPL37
CARD6
RPL13
PCNX4
THEM4
RNF6
AKIRIN1
PTP4A2
ANKRD36C
CENPB
CDC25B
MED16
SPEF1
PRDM5
TRIP4
PCLAF
FUS
TUBA1C
EMC4
UBA2
BRD2
PIK3R1
SENP6
CD55
ZYX
FAM131B
FOXH1
TMCO3
DCUN1D2
PPP1R16A
CASD1
ZNF562
PGM1
TMCO4
NRP1
TNS4
SHC1
SMIM12
YWHAQ
PYGO2
PBXIP1
LOC101928120
ERCC6L2
RRP1B
HSF2BP
ARF6
FTH1
SMG6
CPPED1
PSKH1
NRN1L
MACC1
ZBED8
PKP1
SRR
BAHCC1
ALG13
BCAR1
PHLDA2
RIPOR3
FAM166A
STPG3
DR1
EXD2
SCNN1A
LTBR
NELFB
CPOX
CXXC5
TEX22
PHLDA1
TMEM17
DLC1
STAT5B
MYO5A
TEX46
KDM1A
TRIM3
TIMM10B
ARFIP2
BAZ1B
THBS1
DCLRE1B
AP4B1
MTHFD2L
ERN1
EHMT1
TGM1
RABGGTA
FUT10
SYNJ2
ZFHX3
ISG20
ARRDC1
DSG2
SYT8
TNNI2
TNKS1BP1
SERPINE1
HTRA2
DQX1
MAD2L1BP
GTPBP2
MDM4
PCBP2
RPL6
PTPN11
ELF2
ZNF623
SP3
SRD5A3
UPF2
FOXJ2
UGDH
RSPH9
SRXN1
SLC9A5
FHOD1
MOV10
SURF6
POR
TVP23B
NUDCD3
SLC39A13
LYPLA2
GALE
XRCC5
AGPS
LEKR1
PGGT1B
ITGAV
LSR
RPL19
CACNB1
RANBP9
CTBP2
H3C10
H2BC13
H2AC13
CCNI2
PRELID2
KIF3A
FAM184A
SASH3
PDE6D
COPS7B
KMT2D
RHEBL1
SNAP47
JMJD4
HEXIM1
NDUFAF1
TSPAN10
NPLOC4
ZNF740
CSAD
HNRNPU
ATL2
ZC3HC1
FH
AKAP10
RCC1
LRP2BP
GSK3B
OAT
SMARCA4
SBNO2
EPG5
SLC25A37
FAM151B
TNFSF9
ANKRD37
DLAT
PRKCE
CRYBG1
EPM2A
PSME4
TAF4
NIPA1
PRTFDC1
ZC3H6
CCDC88A
PACSIN3
ARFGAP2
AP3S2
SRSF7
SNRPC
HECTD2
STK40
ANP32B
PDS5B
KCNQ1
KDM4B
TUBB4B
ARL6IP1
VPS45
MIDEAS
STARD10
SQSTM1
CLDN4
PHF3
RFESD
ZSCAN9
PBK
ZAR1L
BRCA2
SGK1
CELF2
SCRN1
MYO1B
CLSTN1
TMPRSS13
SULT1C4
SRP68
ZACN
GALR2
MOB3A
IZUMO4
RRM1
WIZ
AVPI1
KIF22
INTS6
CEP135
SLC39A10
VPS9D1
FGGY
ZNF621
LAMC2
RHOG
SMIM3
TESMIN
ICMT
HES3
YAP1
SMURF2
EP400
DPY19L1
FOXO6
TCF12
DPY19L4
GRHL2
DMAP1
STX6
SCFD1
MARCHF7
SMAGP
RBM45
PDE11A
BLOC1S6
OCIAD1
CHAMP1
COMT
TXNRD2
RNF135
TIA1
PCYOX1
MPP5
TSKU
AIFM2
BCL9
PFKL
MB
XRRA1
SPCS2
POLDIP3
PPP1CC
GMFB
LEMD3
DDX59
PLK2
STK11
SERTAD1
NDST2
ZNF185
SCAP
PRX
CELF1
POLR3G
MBLAC2
DPYSL2
DCK
ZNF236
UEVLD
DNAAF2
ABCA5
PTPMT1
FAIM
CROCC
SH3D19
GSAP
ENPP7
HKDC1
LOC112267881
KIR2DL1
KRT72
TOMM22
ARHGEF12
SCRT1
DGAT1
GPAA1
EXOSC4
RAD52
ADK
LRRC37A3
TET3
NDUFC2-KCTD14
NDUFC2
HSPA9
REPIN1
UBE2F
TMEM168
APOLD1
CDKN1B
KIF5B
MFSD10
DMXL2
NLN
SGTB
SDC1
AGR2
DSTYK
DCAF8
RBL2
RPS14
SERTAD3
DGKZ
COPS3
IMPACT
KLF9
PTPDC1
COMMD10