ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

GNA15
DCAF12
CD40
RLF
UBAP1
ZNF684
IPPK
ZMPSTE24
TMCO2
CAP1
MTMR9
CMIP
MAP3K5
EXO5
DEFA1B
DEFA1
CD33
CCAR2
C8orf58
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
PRSS3
GRPEL2
ITGB2
ZFP69B
SH3BP2
RPS19
ZDHHC3
EXOSC7
LAMP1
NCF2
ALOX5AP
GLRX
ZNF696
SPATC1
NLRP12
NFYC
CAB39
NCF1
CD1C
TEAD3
IL1B
RAB24
PRELID1
NDUFS2
ADAMTS4
PGK1
B4GALT3
LGALS8
RXRA
APOA2
FCER1G
TLE3
DUX4
GPBAR1
PGA4
PGA3
CSF1R
NLRP2
PAQR8
TMEM45B
PNP
PIP4P1
CEBPD
WDFY3
AGTRAP
MTF2
ZNF408
ARHGAP1
ZFP69
SETDB1
YES1
FRG2
PPT1
HBS1L
ITLN1
LILRA6
LILRB5
FLI1
ADGB
MTPN
LUZP6
CD244
CDKN2C
FAF1
PSTPIP1
DEFA3
TP53I11
RNF149
SDCCAG8
CEP170
URM1
VASP
VPS33B
AXL
AKR1A1
SLC38A10
THEMIS2
PGA5
STEAP4
TDRD9
ATP5MPL
SNRNP200
SMAP2
PPP1R12C
TLE4
XRCC5
ARHGAP30
ZNF227
NDRG1
ACTN2
MFSD2A
IL7R
TIGD4
ARFIP1
SUN1
STK36
RNF25
ARHGEF12
MEFV
RUNX1
DENND3
TESK2
MMACHC
CCDC163
TDRD10
SHE
POMP
VCPIP1
C8orf44-SGK3
RUBCNL
FAM207A
MDM4
FOXJ3
MRPS18C
HELQ
NUDT4B
CCL3
CCL3L3
CCL3L1
EXOSC3
TRIT1
APPL2
HSPA6
CEACAM21
FCAMR
NUF2
ITGAM
TMEM30A
DUSP7
TRPV4
KLHL33
IPCEF1
F11R
UXS1
VPS13C
FEM1A
SREK1IP1
CWC27
VTA1
NMBR
CLIC5
KRT36
KRT13
AKR1C3
MMP9
PISD
SASS6
CITED4
TTC14
NUBP1
PPIH
CPLX1
ABT1
RASA1
PRR5
CXCL8
RAB3IL1
HDGF
MRPL24
SP140
SP110
C4orf3
DOCK10
CARD8
MSH6
KIF5C
GABRR2
SEC11A
MIA3
GOLGA7
LCP2
MED23
ENPP3
MXD3
TEKT2
ADPRS
CES1
HAUS6
NIBAN3
KIFAP3
SELENOH
MED18
MED10
IL16
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
OAS3
OAS2
OR52K2
MTRNR2L8
TEP1
SEMA4C
PTTG1IP
ZNF780A
RNPEP
CD1A
LCP1
PDCD2
C5AR2
ROPN1L
FCGR2B
PDF
NIP7
COG8
PPIAL4G
UBXN8
MTRNR2L2
MSH3
DHFR
UGGT1
OTUD7B
DOCK8
ARPC2
C22orf34
CTDSP1
PIKFYVE
UBL7
PALLD
KLF2
TSSC4
USF1
TSTD1
RHEX
RNASE10
TCF12
UTP3
SLC12A6
NUTM1
NOP10
KBTBD7
UBR7
GON7
ARID2
B3GALNT2
EPRS1
ZNF56
NFATC3
COL9A2
GTPBP10
LOC102724770
DGCR6
BRIX1
LYN
UCHL5
RO60
CD53
UCKL1
SCAF11
NCSTN
COPA
USP3
INPP4B
INAVA
TLR4
RPL37A
FAM167A
SIGLEC11
SIGLEC16
ID1
CTSB
ELOF1
SERPINB13
CHMP4B
MAP2K1
PIGM
IFNGR1
TNS1
HIBCH
ZDHHC19
NAIP
TMEM154
FCGR2A
TFB2M
CNST
SDHC
MPZ
DPYSL2
CCDC149
C6orf89
EXT1
MTFP1
RMND1
ARMT1
DBI
C2orf76
IFI16
NAA80
IFRD2
HYAL3
CD79A
TOMM34
STK4
RASSF5
NECAP2
IL1RN
PGBD4
EMC7
TCTE3
ERMARD
CXCL1
TUBA8
EIF2D
KBTBD6
METTL18
C1orf112
SCAMP2
ZNF622
YIF1B
KCNK6
FAM227B
DTWD1
DAP
MFN2
RPL37
CARD6
HIGD2B
BBS4
PPIAL4H
DEFA4
PA2G4
ARPC3
TNFAIP1
IFT20
DCAF10
TBPL1
FASLG
ZNF484
RMDN1
CPNE3
DENND4B
C1orf198
SUSD6
MEF2C
ATP2B4
AP1B1
CTSG
WDR70
NUP155
TMEM53
ARMH1
ADGRE1
INTS9
HMBOX1
RAPGEF1
PDXK
ARHGEF1
GPR68
TIPRL
ZNF410
TLN2
CCND3
TCTEX1D1
ALDOA
TMEM39B
TRIAP1
COX6A1
NOTCH1
DDO
RGL1
ARPC5
NR3C1
DISC1
ZP3
SNAPC3
LRFN3
CHCHD5
PDLIM2
HLA-DOA
THYN1
ACAD8
MTMR14
SCRG1
TPRKB
XRN2
NDFIP2
TNIP1
TMEM231
GPAA1
EXOSC4
FBXO38
LILRA2
NUDCD1
TATDN3
NSL1
APOL6
HM13
COL8A2
NOTCH2NLC
IPP
TMEM59
CMTR1
SBNO2
S100A8
HK3
NOL11
LAMB3
MARCO
TAF11
ANKS1A
SDHAF3
CFAP298-TCP10L
CFAP298
MAPKAPK2
SKP2
LMBRD2
DAZAP2
LYRM1
ADAM10
HMGB1
USPL1
SEPTIN9
GALK2
COPS2
ZNF226
CPNE5
TOMM20
MAP1S
AOPEP
ZMAT2
HARS2
HARS1
LILRB4
TMEM208
LRRC29
EIF3D
ZDHHC7
ITGA4
ZNF658
SLC22A16
STAU1
MRPS23
HEXA
PRPF3
TLE1
JAML
MPL
KCTD5
FCRL4
MS4A3
NOTCH2
FKBP1A
FUCA1
WDR86
DUSP6
ARHGEF10
VIRMA
SNRPC
TOX2
NME7
BLZF1
LMNA
RGS12
GPIHBP1
EIF2B3
NSUN5
RAB7B
PHIP
TPT1
MIDEAS
PLEC
P2RY12
PTK2B
TRIM35
IL6R
SRSF11
LRRC40
ATG16L1
TPM3
TOR1AIP2
TOR1AIP1
NCOA3
ERLIN2
RNGTT
OTULINL
AK2
ALG10
SDHAF2
CPSF7
KIAA0895L
EXOC3L1
E2F4
ELMO3
TMIGD3
ADORA3
PKN2
TMEM104
NAT9
PPP4R3A
CBWD1
ISY1-RAB43
ISY1
TRIB3
KIF2C
DNAJC10
FIGNL2
WNT10A
IRAK1BP1
XRRA1
SPCS2
TLE2
MRPL3
IKBKE
TBRG4
PRRG2
NOSIP
SCRN2
MRPL10
LRRC46
OSBPL7
MRPL2
KLC4
CUL7
EAPP
TATDN1
NDUFB9
THOC5
DPY19L3
CYB5R1
FCAR
SCAF1
RRAS
MAMDC2
WDR61
NMNAT1
LZIC
TFIP11
CCL22
ADORA1
JOSD2
ASPDH
TMEM33
SNX3
ZNF197
SORBS3
PPIAL4F
PPIAL4E
PPIAL4D
DCSTAMP
ZC3H3
KLHL20
PRAM1
LMO2
VASH1
ZWILCH
SNAPC5
RPL4
ATG5
SMARCA4
ZNF614
FAM200B
GGPS1
ARID4B
MAGEF1
PHACTR4
PDPR
TACC1
LTB
LST1
NCR3
SAMHD1
BCAS1
TRIP4
PCLAF
C6orf47
APOM
GPANK1
CSNK2B
RTF2
LY6G5B
SRP9
SEC22B
ARHGEF3
SSC4D
SV2A
BOLA1
STYXL1
GHRL
TREM1
SNX19
LYPLA2
GALE
TPK1
ZNF221
HEATR1
SLC8A1
PHB
TBL2
RPS2
RNF151
TBL3
NOXO1
INTS12
GSTCD
MOB4
CNGA1
BOD1L1
FBF1
NAT10
MAP3K7CL
MYBL1
CCT8
CMPK2
NDUFS3
KBTBD4
FAM180B
TTC13
DR1
RPS6KA2
AP2B1
PEX12
NDUFA12
ZNF668
ZNF646
RTCA
SCML1
OSCAR
NDUFA3
GADD45B
WNK4
VPS25
TPST2
SUCNR1
MAML2
TOR1A
PCM1
THAP9
SEC31A
ZFYVE1
DDX18
LAMTOR5
CD99
TRNP1
CDKN1A
MTERF1
MFSD10
CASS4
GPA33
RPS20
MTRNR2L1
RAB1A
ERI1
GPR88
SLC34A1
ASXL2
CHMP5
BAG1
P3H1
LRRFIP1
PEX3
ADAT2
TMEM43
CHCHD4
HSPA13
TBC1D8B
CAVIN2
TMEM222
NUS1
PBK
GTF2H3
EIF2B1
GTF2H2C
ZNF26
GTF2H2
ZNF224
DHDDS
CHMP7
SLC35F6
FCGRT
CMKLR1
MYL5
ATP5ME
STK38L
NUP133
SLC35B4
PHC2
CCDC86
A2M
POR
SNUPN
PPIE
WASHC5
NSMCE2
PPIL4
NR1D1
BID
ZNF398
ZNF425
TRIP11
CERS2
ANXA9
NCF4
PLEKHO1
MRPS35
CCNT2
DNAJC5B
LRP3
CSF2RB
ATG7
MTIF2
ALG10B
WDR55
DND1
TMX3
CCDC102B
TCHP
RPL36
MICOS13
HSD11B1L
TAGAP
CIITA
TNFSF10
RAB44
TMTC3
CEP290
RPAP3
MFSD4B
LMBR1
ZNF142
BCS1L
NEK7
CBFA2T3
BIN2
PPP1R8
TAF1B
UBAP2L
C1orf43
LTBP2
RGS18
MMUT
CENPQ
ZNF350
DOK2
ARHGAP18
ORMDL3
GSDMB
STK25
RWDD1
SRPRA
TRAPPC8
NECTIN4
PRKCSH
CCDC151
WNT2B
AOAH
CHPF2
ABCF2
ABRAXAS2
EEF1AKMT2
GTF2H2C_2
PSMD7
PIGF
CRIPT
UNK
H3-3B
TMEM127
CIAO1
WBP1
INO80B
ACSL3
VPS26C
DECR1
FPR2
FPR1
SYMPK
FOXA3
PSMD3
SCAND1
GNPAT
C1orf131
TRIM25
RCSD1
CEACAM4
IBA57
RNF139
SERPINB6
MR1
TTYH2
RPL38
PTPN4
SPG11
PPP6C
UBE4A
TNPO1
SEMA4B
AHI1
MINDY3
TERF2
RBM45
PDE11A
PPME1
C2CD3
SF3B1
ZC3H13
RPIA
RPL27A
WIPF2
LARS2
SRFBP1
PDSS2
KIZ
RAD50
RAB27B
BAZ1A
RPL5
CLPP
BCL3
MRPS14
HMOX1
MLKL
PGLYRP4
S100A9
GIMAP6
MAD2L1BP
GTPBP2
NTAN1
EPN1
CAPG
FAM120B
TIMM10
SMTNL1
TIMM21
FBXO15
ZNF697
TMEM121B
CCDC30
ZMYND12
PPCS
UBLCP1
WDR7
COX7A2
SYK
LY6E
CD5L
NOTCH2NLA
GNAL
CHMP1B
TBC1D23
MAGOH
CBWD5
LATS1
ZNF513
SNX17
EIF2B4
PRR22
DUS3L
GET4
RPL27
IFI35
ATP6V1C1
ARL4A
KPNA5
ZNF3
COPS6
FRG1
OTUD6B
MS4A7
C1orf74
PARP10
GRINA
NPRL2
TMEM115
CYB561D2
RPS6KB2
PTPRCAP
ZNF225
CBWD3
CBWD6
THEM4
PUM1
IL10RB
VIT
PHLPP1
CYB5B
NLRP3
DCANP1
TIFAB
SLC24A1
INTS14
SF3B5
ARID3B
NUP42
TLN1
CREB3
ADAR
COX16
ARHGAP42
NGB
DAGLA
FRG2C
PGS1
N4BP2L2
COX5B
MYCL
LPAR5
ACRBP
PRKCB
BATF
DCP1A
METTL9
SNAP47
JMJD4
TPR
ODR4
ETNK1
SLC30A5
HCN3
CLK2
ANXA2R
PICALM
ATP13A2
IRF8
CCDC182
CBWD2
RANBP3
CYRIB
WDR27
C6orf120
ZNF318
VSIR
CASP8AP2
MDN1
SECISBP2L
ATP1A4
NKIRAS1
RPL15
SLC33A1
NCKAP1L
GYPC
ZNF337
SESN1
CEP57L1
NUP58
HIP1
CLASP1
PIGBOS1
PIGB
CTNNB1
PRCC
TRAK2
STRADB
CDCA8
C1orf109
STK10
ICAM1
NCALD
CALHM6
OR4D9
OR4D11
AHCTF1
DCLRE1B
AP4B1
SH2B3
RASA3
IGF2R
ACSL1
NFKBIL1
DDX39B
ATP6V1G2
YTHDF2
ETFDH
C4orf46
SUCLA2
SMARCD3
WDR43
TOMM40
MCPH1
ZC3HAV1
FCGR3A
TAF12
RIC8B
DESI2
AP3S2
RRS1
ADHFE1