ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327758 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◣ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

HIKESHI
NAA80
IFRD2
HYAL3
DDX23
BOD1
CALCOCO1
NPRL2
TMEM115
CYB561D2
PHB
CALR3
C19orf44
LARS1
GSPT1
TCEA2
AHCYL2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
GPBAR1
PNKD
AAMP
ORMDL3
GSDMB
UBE2T
PPP1R12B
TMTC3
CEP290
ZNF225
TESK2
MMACHC
CCDC163
CHMP4B
ST3GAL2
CLPB
SMPD3
BTRC
CTU1
UCKL1
ODF3L2
MADCAM1
NTAN1
INVS
ERP44
PAFAH2
SYMPK
FOXA3
SLC39A1
CREB3L4
CRTC2
KBTBD6
PPRC1
WDR87
SIPA1L3
TMEM127
CIAO1
TTC13
RPIA
PANK4
HES5
SNX27
CCP110
ZNF189
MRPL50
MAD2L1BP
GTPBP2
UBAC1
SNX17
ZNF513
EIF2B4
DEXI
CLEC16A
TRAPPC3
MAP7D1
TSNAXIP1
RANBP10
SLC35B4
MED15
STAU1
TNFAIP1
IFT20
CBARP
MIDN
ATP5F1D
HDGF
MRPL24
C1orf159
PPP1R12C
PYCR3
GFUS
FASTKD1
PHF12
ZFYVE1
ATP5PO
TTC33
ZFYVE19
DNAJC17
ING4
ZFYVE28
CFAP99
SCRIB
VCPIP1
C8orf44-SGK3
ING3
ZNF749
UNKL
C16orf91
PERCC1
UNK
H3-3B
TSSC4
AP2M1
TSC2
NTHL1
RASSF1
ZMYND10
NUDCD1
FEM1A
THRAP3
GATB
TMEM59
ZC3H11A
ZBED6
TRAK2
STRADB
SMARCAL1
STK25
KBTBD7
COX7C
ZNF384
BANP
ZNF444
SCAF1
RRAS
PHF13
CHPF2
ABCF2
WNK1
TIMM21
FBXO15
UBQLN4
LAMTOR2
TMEM208
LRRC29
CLP1
YPEL4
CCDC146
RPL36
MICOS13
HSD11B1L
CTF1
BCL7C
PEMT
SLC4A2
CDK5
ASIC3
PRCC
SIRT2
NFKBIB
SV2A
BOLA1
DESI2
HTRA2
DQX1
ZNF517
ZNF34
RPL8
NOP14
GRK4
ZNF56
POLR2E
GPX4
NDUFS2
ADAMTS4
NFXL1
UBR2
RPS2
RNF151
TBL3
NOXO1
VARS2
GTF2H4
EMILIN1
OST4
KHK
ZNF169
ZNF420
FBXO46
MEIOSIN
UFSP2
C4orf47
STK17A
ZSCAN22
MYLK4
WRNIP1
PEX26
DDX49
COPE
ZNF235
OSCAR
NDUFA3
FBXW11
ARHGAP35
AP2S1
RAB1A
LETM1
RALBP1
RPGRIP1L
FTO
TFEB
TTBK1
BUB1B
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
SEPTIN9
PSMD11
RBM6
MON1A
JOSD2
ASPDH
SSBP1
CHCHD3
CCDC150
ZNF224
SMUG1
PEX14
DFFA
DSTYK
MRI1
C19orf53
CNIH4
SLC25A19
TMEM70
ELOC
THYN1
ACAD8
ZNF337
CAPN15
UBE2Q1
CHRNB2
SEC61A1
GPR15
CLDND1
NMT1
DCAKD
TMEM43
CHCHD4
SERPINI1
PDCD10
BICD2
INTS9
HMBOX1
CNOT1
UBL7
USP48
DYNC1I2
PKLR
FDPS
LMNB2
IGSF8
TMEM69
GPBP1L1
TOR1AIP2
TOR1AIP1
EMP3
CCDC114
B3GALNT2
PSMD2
ZNF32
TFPT
PRPF31
KMT2B
PTDSS2
ANO9
SLMAP
PANK3
RANGAP1
RAB5C
GABARAP
PHF23
DVL2
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
ZNF230
AKIRIN2
CCDC90B
WDR53
FBXO45
LTA4H
RTN2
SEC11C
IPPK
CFAP410
WDPCP
MDH1
ZNF554
MARS1
ARHGAP9
ZNF37A
TIMM13
CDK5RAP2
PIGU
DDX47
ZNF354A
RALGAPA2
ZNF133
RABAC1
SSR2
BUB3
HMX2
FAM185A
ZW10
CLDN25
CTDP1
AURKAIP1
USP31
PA2G4
PRR14
FBRS
CLDN6
TNFRSF12A
THOC6
HCFC1R1
WAPL
ZNF419
ZNF772
YPEL3
TBX6
SOX6
C11orf58
NDUFB5
MRPL47
WBP2
RPS6KB2
PTPRCAP
SNX1
CIAO2A
SAMD1
C19orf67
MISP3
FBXO48
APLF
GPT2
PNPLA6
RPS20
CDCA8
C1orf109
CCDC174
EIF2S2
RPS26
SCAMP4
ADAT3
ZNF547
TRAPPC2B
FHIT
RIC8B
GPKOW
WBP1
INO80B
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
RAD51AP2
RPS13
TXNDC9
EIF5B
UCHL5
RO60
CCNT2
FHL3
UTP11
FAM193A
ZNF277
DOCK4
NUP153
ZNF350
EXOC4
USP35
KCTD21
SYNGR4
KAT7
CNOT4
MXI1
FBXL19
PDE6D
COPS7B
RPS7
TRAF7
RAB26
ZNF527
GID4
ATPAF2
VPS50
HEPACAM2
SYPL1
INTS1
PSMC4
PSMD4
ABCC5
LUC7L
FAM234A
RPL18A
TRABD
PIH1D1
ALDH16A1
ZNF451
SLC17A7
ZNF768
ZNF747
ZNF586
VAPA
TTC1
SUFU
ACTR1A
ZGPAT
ARFRP1
DEDD
TRMT1L
SWT1
PGBD4
EMC7
TLE3
SNRPE
TMEM101
XPOT
ZNF862
MGRN1
UBALD1
CLPP
ZNF484
AHCTF1
ILF3
SPHK2
RPL18
FAM83E
MAX
MED27
GPAA1
EXOSC4
METTL26
WFIKKN1
CSRNP2
PTBP1
ZCCHC8
VIPAS39
AHSA1
ZNF514
ZNF2
HSPA13
TMEM245
RBL1
L3MBTL2
PHB2
MRPL20
CCNL2
S1PR4
NCLN
ZCCHC4
QTRT2
CCDC191
ZNF548
SSR3
NCBP2AS2
NCBP2
ZMYND15
MED11
CXCL16
KATNB1
SCAMP3
FAM189B
TMEM186
PMM2
CORO1A
CRK
ZNF773
NFKBIL1
DDX39B
ATP6V1G2
SCYL3
PPP6C
LRFN3
ZNF140
PRRG2
NOSIP
RAB30
VPS4B
ZNF343
RPS3
GINS3
BIRC5
CNOT6
LIN37
PROSER3
HSPB6
PSENEN
LEMD2
SDCCAG8
CEP170
SLC38A9
RETSAT
RPL12
LRSAM1
ADSS2
CATSPERE
POLR2J3
METTL3
COPS8
ASXL1
NKIRAS1
RPL15
ZNF599
KBTBD8
UBE2N
PRKCSH
CCDC151
DCP1A
ENOX2
ZNF226
MUS81
CFL1
TMED9
B4GALT7
MAF1
CYC1
WDR97
ELP6
DNM1L
DCAF1
CAPN10
POLRMT
FGF22
RAB7A
ITPR1
FAM149B1
ECD
ZNF585A
PRR5L
COMMD9
DNAJC28
SH2D3C
CDK9
UBA1
ZNF567
EML6
GGPS1
ARID4B
SCRT1
DGAT1
AKAP8
PSMB4
WASHC3
GFM1
MBD1
CXXC1
SF3B2
GAL3ST3
ZNF45
ZNF584
TPGS1
ZMAT5
UQCR10
ZNF227
FAM53C
CDC25C
FAM222A
ZNF25
CIAO3
CWC25
CARS1
TOR2A
HSP90B1
COPS7A
TMEM94
ZNF764
OPA1
COG2
MORF4L1
RPS3A
NOLC1
PCM1
FBXO38
TSNAX
C1orf54
APH1A
UBA52
AQR
IPO13
WASF1
CDC40
ABRAXAS2
EEF1AKMT2
NCDN
KIAA0319L
SERP1
EIF2A
CTNNBL1
PPP1R7
PASK
RXFP4
KHDC4
C12orf43
MTR
BET1
IFRD1
CDC34
MED23
ENPP3
ZNF17
CDK8
SLC50A1
DPM3
TERF2
ZNF416
ZIK1
DOHH
FZR1
SKP2
LMBRD2
ACP6
DPP9
PGAM1
CAPG
SH2D6
SUGP1
MAU2
TSN
CEP350
EIF3C
EIF3CL
ZBTB7A
MRPS16
DNAJC9
UBE2V1
FAM228B
TP53I3
SF3B6
RAB8B
TMEM33
CAND1
RAB29
SNAPIN
PPP1R13L
POLR1G
TMEM199
SEBOX
POLDIP2
RPL22
RNF207
NAT14
ZNF628
DBP
CA11
MRPL54
APBA3
RAX2
OAZ3
MRPL9
CUEDC2
MEN1
MAP4K2
RWDD1
ZNF500
SKIV2L
NELFE
VEZT
FGD6
RPL34
GSC2
ACLY
EIF1B
DARS2
CENPL
TRUB1
TOR1A
RPP40
CCDC124
HEXIM2
BOD1L1
EIF3D
VMO1
PSMB6
GLTPD2
RBL2
NUMA1
LRTOMT
NAPB
HIRIP3
SLC25A44
RPS19
SF3A3
ZNF805
AURKC
ZC3H10
RPL41
ESYT1
ZNF304
PARK7
PRR22
DUS3L
SMN2
SMN1
MPI
NPL
CHCHD6
ESCO2
NUF2
CCAR2
C8orf58
CD2BP2
SLC37A3
RAB19
KYAT1
LRRC8A
TMEM160
CLINT1
PSMD3
TOGARAM1
KLHL28
MAMSTR
ZSWIM9
LIG1
TSACC
CCT3
NUDT13
DPH2
B4GALT2
ATP6V0B
PRPF4
CDC26
ZNF155
AP2B1
PEX12
NARS1
THAP1
RAB3C
C15orf40
BLOC1S5
CMPK1
SERBP1
IPO8
CCNL1
STRN
HSCB
CHEK2
YY1AP1
DAP3
R3HDM1
ZRANB3
USHBP1
BABAM1
PSMC3
REXO1
INTS4
RRP36
MEA1
KLHDC3
GPR137
NOP53
ZNF26
RAB1B
TTLL11
SDF4
B3GALT6
RNASEH2C
KAT5
LRPAP1
SUPT5H
RPS16
UCK1
ZNF789
ATP5MF-PTCD1
ATP5MF
RPL27
IFI35
BDP1
PRKCI
SENP5
TOMM22
DAZAP1
GAMT
SASS6
NEK8
RPL23A
RAB34
TLCD1
PROCA1
ZNF436
VAMP7
ZNF268
THAP11
NUTF2
CENPT
ARPP19
MITF
IPO7
SH2B1
TUFM
ZNF691
ALG10B
FBXL18
DMAC1
CANT1
ZNF530
RPP30
ABLIM2
EMSY
RCAN1
STXBP2
PCP2
XAB2
UBE4A
XRRA1
SPCS2
PUS3
DDX25
ZNF180
ZNF550
ZNF286A
RAB13
RPS27
AMT
CCDC117
ZNF211
NICN1
ZNF317
GSK3A
KLHL24
SLC33A1
NUP205
COA3
CNTD1
WDR18
C7orf25
ZNF221
TMEM222
TCTEX1D4
BTBD19
HPS6
ARMH3
FBXO9
CILK1
MVB12A
MYBL1
ZBTB6
RC3H2
TSNARE1
VRK1
OSBPL11
KPTN
STMN3
RTEL1
TPR
ODR4
ZNF605
JTB
KNSTRN
FCSK
ZNF446
ZNF324
MYL6B
MYL6
NME1-NME2
NME1
DNAJB6
NCOA3
GHITM
VKORC1
PRSS53
SAP30
DENND1A
AMD1
CDK19
YIPF2
TIMM29
SND1
ZBTB45
SLC27A5
DYRK1B
CPEB3
MARCHF5
ZNF165
OR1F12
ZNF668
ZNF646
NFATC3
FBF1
SART1
FIS1
CLDN15
POLR2H
CLCN2
USP15
KIAA0930
TMEM258
FEN1
TIMM22
TMEM88
NAA38
CYB5D1
ERF
SHLD1
R3HCC1L
CWC22
ZDHHC16
EXOSC1
ALG10
WDTC1
PCNA
TMEM230
PRDX2
RNASEH2A
NMNAT1
LZIC
ECHS1
PRPSAP1
RACGAP1
ZNF417
TMEM262
PIP5KL1
DPM2
SNIP1
DNALI1
DHX30
ZSCAN32
ZNF174
SETDB1
ZNF460
LRRC47
NUP214
CACTIN
RAD52
ZNF324B
TXNL4B
DHX38
TPRKB
NDUFS7
ARHGEF1
CD79A
NDUFB10
RPL3L
CDC6
UBE2D1
SHPK
CTNS
CCDC142
TTC31
ELOB
PRSS33
TIMMDC1
REXO2
FAM193B
THAP4
ATG4B
C16orf86
PARD6A
ACD
RPL29
STX10
IER2
TMEM214
YJU2
SLC30A6
ETFDH
C4orf46
PRUNE1
MINDY1
TMEM79
SMG5
BRIX1
SLC35E1
WDR45
PRAF2
ZNFX1
SNAPC3
RPL37
CARD6
RAB5IF
DYNC2LI1
WIZ
PSMD10
ATG4A
AP5S1
TMEM147
YWHAG
TOE1
MUTYH
PCNP
TRMT2A