ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7366781 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◣ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

EIF5AL1
UBB
GTF3C5
TUBA1B
TUBA1A
RNF169
HSPA5
TUBB
MDC1
SERBP1
H2BU1
H2AW
RBBP9
SEC23B
HMGB1
GSTA4
PCNP
EEF1A1
PABPC3
UNK
H3-3B
TBCA
SLC25A5
STPG4
GPX1
TUBA1C
HNRNPF
EYA3
SMOC1
HNRNPA3
HLA-E
DSE
TSPYL4
CHD1L
PRKAB2
PCBP1
NEMF
SLC25A4
HNRNPA2B1
CBX3
POLG2
DDX5
NKIRAS1
RPL15
CYBRD1
DLK1
HSPA8
UBC
PHB
EHD1
RPS29
ISY1-RAB43
ISY1
POLB
PARP2
PTMA
CCNB1IP1
H2AZ1
DNAJB14
CDH12
KLF17
DVL3
ARF6
ACTB
TUBA4B
TUBA4A
STK16
GLB1L
WWP2
NOB1
SLC5A1
DUSP13
FAM166A
STPG3
TUBB4B
ZNF286A
CDON
EFCAB10
RPL21
ANP32C
EIF4A2
PABPC1
SRSF1
GLUD2
ABLIM1
SUGT1
DUX4
SAXO1
RRAGA
H2AX
DPAGT1
HMBS
MFSD2A
SERF2
SERINC4
HYPK
KRBOX4
NPC2
SRSF2
MFSD11
METTL23
JMJD6
H4C12
H2BC15
H2AC15
MAT2A
YBX1
HSP90AA1
MARCKS
GJB1
H3-5
SLC13A2
GAPDH
COQ3
SIT1
CCDC107
ARHGEF39
ZNF485
PRRC1
VIM
RBMXL1
KYAT3
GOLGA3
YWHAQ
NAPEPLD
HEXIM2
HEXIM1
NDUFB3
FAM126B
GDA
NATD1
CSNK1A1L
UBR1
EIF2S3B
EVL
UBQLN2
GABBR1
INTS6
TBC1D28
RPL36AL
MGAT2
MUS81
CFL1
ZNF564
SRSF5
H4C4
H2BC6
PGRMC1
ALDH1B1
RPL10L
MAF
ID2
TTPAL
GSPT2
SOD2
ACAT2
CNTF
TUBB2B
SIRT4
FGA
CALHM6
CSNK2A3
H1-2
SAR1A
RBMX
TMEM183B
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
DEGS1
TMEM248
TUBB2A
ZNF217
ART1
HNRNPH2
PTPDC1
PYGM
FSCN1
CITED2
TMEM30B
TAF9
RAD17
AK6
PNN
COX18
H2BC21
H2AC21
H2AC20
KLHL9
TLL2
EAPP
WDR74
STX5
GART
RHOB
PIGV
PARD6B
H1-0
GCAT
GTF2IRD2B
GYG1
GABPB1
YY1
STAB1
FAM214A
H4C9
H2BC12
H2AC12
KMT2E
PRRT2
MAZ
PAGR1
KLF5
ZC3H6
HLA-C
CSF1R
H3C13
H2BC18
PPM1D
ZMYM5
NCOA3
MSL1
KRT8
SPPL2A
DDX23
MTF2
NAA80
IFRD2
HYAL3
LAMP1
RPS2
RNF151
CCNL1
KMT5B
CTNNB1
TBL3
CLTC
FEM1A
DSTYK
PDE6D
COPS7B
NOXO1
FRG2C
EIF2D
CHPF2
ABCF2
CALR3
C19orf44
NOTCH2NLC
STX18
TMEM41A
TIMM21
FBXO15
BRWD1
NCBP2AS2
NCBP2
MRPL21
IGHMBP2
LAT
CALCOCO1
DCP1A
UCKL1
CKS2
SECISBP2
ATAD2
SPNS1
TSNAXIP1
PAFAH2
RANBP10
CALM3
PPRC1
PPP5D1
GSPT1
TMEM199
SEBOX
POLDIP2
POLR2J3
NPRL2
WTAP
HDGF
WDR53
FBXO45
NOTCH2NLA
TMEM222
TMEM115
CYB561D2
SPATC1L
CALM1
GATB
ARHGAP35
AP2S1
FOXJ3
RASSF1
NDUFS7
CLPB
OPA1
CALR
HEXA
SSNA1
ANAPC2
RBL1
TSN
CCDC88A
SEC13
DOHH
TOMM22
SLC39A1
CREB3L4
CALM2
LRP6
MRM3
GLOD4
AURKAIP1
ZSCAN22
NMNAT1
LZIC
CYCS
UNKL
ORMDL3
GSDMB
NOTCH2
MRTO4
EMC1
TCF3
TIMM22
FAM180B
STX16
NDUFS3
KBTBD4
ZNF517
ZNF34
RPL8
COPS8
FZR1
TRIP4
PCLAF
KBTBD7
NOP14
GRK4
CCDC77
GPBAR1
BTRC
TNFAIP8L2
NUP214
SMN2
SMN1
CNOT1
KMT2D
PEMT
C16orf91
TMEM262
MED23
ENPP3
B4GALNT3
CRTC2
ST3GAL2
CFAP410
TESK2
MMACHC
CCDC163
KPNB1
RHEBL1
POMZP3
SCAF1
RRAS
CHMP4B
SYMPK
FOXA3
CTDP1
ZNF337
MRPL24
BOD1
IPO11
DIMT1
RPS3
SNX17
ZNF513
EIF2B4
PSMD3
PNKD
AMD1
TSSC4
IST1
ZBTB45
AHCYL2
PEX3
ADAT2
PRCC
RPS20
WASHC2C
AAMP
TOB2
TCEA2
DDIT4
RAD23A
ING3
HTRA2
DQX1
TAF12
TSC1
GFI1B
PA2G4
FRA10AC1
UBE2B
CDKL3
GTF2H3
EIF2B1
DEXI
CLEC16A
PHIP
RPL36
MICOS13
HSD11B1L
ADPGK
ZNF212
MAF1
CYC1
ZFAND2A
SMPD3
THRAP3
NUF2
WASHC2A
ZMYND10
ARHGEF12
PEX26
UBE2T
PPP1R12B
DYRK1B
NAGPA
RPL18A
KCTD9
CDCA2
KBTBD6
RPL22
RNF207
PKM
RPS6KB2
PTPRCAP
USP30
TTC13
SCNM1
LYSMD1
ZNF789
ATP5MF-PTCD1
ATP5MF
VARS2
GTF2H4
NUDCD1
FAM207A
PERCC1
MED15
ZCCHC4
HIKESHI
NOTCH2NLB
KDM5A
SLC27A5
ZKSCAN2
TRIAP1
COX6A1
PARL
OSCAR
NDUFA3
ZNF721
PIGG
NXF1
UBE2D3
TMOD4
MCM7
AP4M1
OAZ3
MRPL9
RPS28
NDUFA7
WDR97
ATG14
INVS
ERP44
TMEM127
CIAO1
MAD2L1BP
GTPBP2
USPL1
PNRC2
KCTD5
SCRIB
RPIA
FAM53C
CDC25C
MRPL20
CCNL2
PANK4
HES5
C8orf33
PTPN6
C12orf57
ZNF444
WDPCP
MDH1
TMTC3
CEP290
RPS26
C1orf159
PPP1R12C
RNASEH2C
KAT5
DNAJC11
FUS
GABARAP
KDM4B
TNFAIP1
IFT20
TRAPPC3
MAP7D1
TMEM79
SMG5
GPAM
DIP2A
RANGAP1
DUS2
DPEP2NB
DDX28
ZNF384
FARSA
CCAR2
C8orf58
CLP1
MRPS15
ZW10
CLDN25
CYP51A1
LOC102724770
DGCR6
BRIX1
SLC35B4
FRG2
MAPKAPK5
MFN2
MXD4
UBR2
MRPS16
DNAJC9
INTS9
HMBOX1
ATXN2L
CORO7-PAM16
CORO7
NME1-NME2
NME1
DNAJA3
RBM42
SRSF11
ZC3H10
RPL41
ADNP
TMEM208
LRRC29
ZNF56
NUP153
UBQLN1
PEX14
SCGB1C2
RPS5
PGBD4
EMC7
PCID2
CUL4A
TBRG4
ALKBH3
BANP
KAT7
RLF
MDM4
C6orf47
APOM
WBP1
PSMF1
DFFA
CHD2
BOD1L1
INO80B
ABRAXAS2
VCP
FANCG
PSMD11
COMMD1
MANF
SLC25A19
EEF1AKMT2
PINX1
MRPS35
SV2A
NSFL1C
UBE2Q1
CHRNB2
UBQLN4
LAMTOR2
CCT4
TOR1AIP2
TOR1AIP1
MRI1
C19orf53
HMGCL
DPP8
NMT1
DCAKD
RBM15B
GHITM
STK25
H4C11
CCDC146
ZFYVE1
MTRNR2L1
TAF5
FBXW11
GID4
ATPAF2
PBLD
HNRNPH3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TRIP12
FBXO36
DPP9
TMEM70
ELOC
CLDN6
DCAF10
AP2M1
RIC8B
PRR5L
LRRC40
SPRYD4
NOC4L
DDX51
TEPSIN
NDUFAF8
SLC33A1
LUC7L
FAM234A
VPS37A
CNOT7
CDKN2C
TMEM88
ZGPAT
ARFRP1
SCGB1C1
ODF3
SPATA25
NEURL2
RPLP0
GCN1
TTC33
SEPTIN9
PHF23
DVL2
UCHL5
RO60
ENDOV
DOLPP1
AHCTF1
ZNF420
CIC
ZFYVE19
DNAJC17
PIGU
CTSA
HNRNPAB
ZSWIM1
EIF3F
NTAN1
PYCR3
GFUS
RBM6
FBF1
SP2
RPL29
CSRNP2
SPTLC1
MRPL58
CHCHD1
SUPT5H
RPS16
TCF12
COMMD9
CRBN
H2BC5
H1-4
LETM1
STAU1
ACOX3
EMILIN1
IDH3B
DNAJB12
PHF12
SUFU
ACTR1A
RCL1
CCP110
SMARCAL1
CANT1
LONP1
CATSPERD
TFPT
PRPF31
MTMR2
MON1A
RALBP1
BIRC5
HSP90AB1
PHF13
SSBP1
TRMT44
UBL7
PIK3R3
SNAPC3
SUPV3L1
ARF4
HSP90B1
TRAF7
NDUFV1
GTF2I
OST4
TSC2
NTHL1
CTU1
ZFPL1
CDCA5
PKLR
MTRNR2L2
MSH3
FDPS
DHFR
COQ9
CIAPIN1
TMA7
CCDC51
ATRIP
DDX49
COPE
DNM1L
MARS1
ARHGAP9
JOSD2
ASPDH
RPS7
DDX1
COG2
SF3A3
TMEM242
P2RY11
ZNF749
SART1
ODF3L2
MADCAM1
ZSWIM8
SNRNP70
RCOR1
DCAF8
RPL12
LRSAM1
SNX1
CIAO2A
TOP3B
RAB26
RAB5C
TMEM59
MRPL39
BOLA1
TMED9
B4GALT7
MYBL2
DCAF1
WASHC5
NSMCE2
PNRC1
DESI2
RWDD1
PRSS22
WAPL
ZFYVE28
METTL9
CAND1
TNFRSF12A
THOC6
HCFC1R1
CFAP99
CHCHD3
TRAK2
STRADB
B3GALNT2
IP6K2
CD68
SOX6
C11orf58
PCNA
TMEM230
POLR2E
VCPIP1
C8orf44-SGK3
TLE3
COX7C
POLG
SLC24A1
INTS14
SLC7A6OS
PRMT7
ESYT1
PIK3IP1
GTF2H2C_2
GPX4
CCDC59
TTC4
BICD2
ATF4
FAM228B
PTEN
KLLN
FBXL12
NLK
WDR87
SIPA1L3
FBXO46
TEKT2
ADPRS
IPPK
DPY19L4
MCU
SLC3A2
H2BC14
H2AC14
PSMD2
TRMT61B
BCKDK
ZNF500
USP48
SKIV2L
NELFE
PRKACA
RPS19
BRF2
NEK8
MTRNR2L8
THYN1
BECN1
ACAD8
PLEKHM3
SIRT2
NFKBIB
PIH1D1
ALDH16A1
PSME3
SMIM13
PSMD4
SSR3
UBE3B
RPLP1
STAT1
CAPN10
TARBP2
MAP3K12
FAM149B1
ECD
GTF2H2C
ZNF148
TIMM13
TACO1
GFM1
SLC4A2
CDK5
NDUFB5
MRPL47
CCDC90B
ZC3H3
RCOR3
CMTR1
ASIC3
MYLK4
KAT8
SRRD
HPS4
VIRMA
ZER1
TFRC
NPFF
CTF1
BCL7C
SLX1B
SLX1A
BOLA2B
BOLA2
RUVBL1
NOP53
TMEM217
TBC1D22B
COQ7
ASXL1
TRUB1
COA6
COPS7A
NOLC1
LARS1
UBA52
EIF4A1
RFXANK
BORCS8
SESN1
BMS1
CDKN2AIPNL
HAGH
FAHD1
PCBP2
CFAP20
KDM4A
KHK
PPAN-P2RY11
PPAN
ANGPTL6
SRP68
REXO1
SPRED1
ACTRT3
BUB3
FAF1
KPTN
NDUFB8
HIF1AN
PHB2
CACTIN
SF3B2
GAL3ST3
EEF2
WNK1
NDUFB10
SHC1
RPL23A
USP15
PARK7
RAB34
YPEL4
TLCD1
RAB13
XRRA1
SPCS2
WBP2
HMX2
NDUFAB1
PTDSS2
ANO9
BUB1B
WRNIP1
ZNF518A
RPL3L
ZACN
GALR2
KMT2B
FBXO24
PHAX
EMP3
CCDC114
ALDH7A1
GPANK1
CSNK2B
ZNF225
TMEM109
PRPF19
RANBP2
SULT1A4
SULT1A3
LRCH4
CWC25
XPOT
PI4K2A
MORN4
SMIM12
TIGD6
HMGXB3
PALB2
DCTN5
TATDN3
NSL1
MRPS11
MRPL46
PTBP1
TSFM
EEF1AKMT3
EIF2S2
SELENOH
CEP350
WDR25
WARS1
PROCA1
CCDC150
ZNF189
MRPL50
OAZ1
SNRPD3