ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144543 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◣ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

OSGIN1
TNK2
GSDMD
RBFOX3
DHX16
PPP1R18
NRM
IAH1
CPXM1
UBE4A
GTPBP6
INKA1
CDHR4
UBA7
ELOA2
LGR6
DUX4
PRL
AUNIP
NCF1
MEF2C
SARAF
LEPROTL1
HACL1
BTD
FABP6
DENND3
ADAMTS15
VASP
ENG
TMC8
TMC6
LYL1
NME1-NME2
NME1
TBKBP1
AKR1A1
CYB561
LOXL2
UCN3
HNRNPF
NKX6-3
TMEM275
SLC38A10
CTSD
IFITM10
ZNF696
CTRC
RHPN1
F11R
USH1G
OTOP2
ZNF562
FAM107B
NUF2
FMNL1
RNF166
CTU2
SH2D3A
VAV1
SLC9A3R1
RAB37
EGFL7
DPY19L4
BMS1
NIBAN3
CEP295NL
PRAM1
NFRKB
IREB2
DRC7
EVPL
CRYBB2
MTSS1
CCL3
CCL3L3
CCL3L1
S100A8
CSF1R
MTRNR2L1
TNFRSF1A
MUC6
GALNT7
PLAUR
EPHA8
UHRF1
OLFML2A
TMIGD2
FSD1
STK10
RPS6KA1
PRRC2B
FRA10AC1
TMEM104
NAT9
NEK6
TPM4
SBK3
SBK2
AGTRAP
CHST13
SPINK8
KLF2
C1orf159
NINJ2
SMG8
B4GALT3
MRPS18C
HELQ
PDXK
TBX10
ACY3
OLIG1
C3
ARHGAP25
SH2D3C
CDK9
DCAF10
ADAP1
GTF2H5
KRT17
MYO1G
GNAI2
CRYAA2
CRYAA
KCNK9
TACO1
IGF2
TOR1AIP2
TOR1AIP1
CBFA2T3
RNF220
DGCR6L
SUSD1
GNA15
SAMD14
MMEL1
GSX2
SCAMP2
CAMK2G
TEPSIN
NDUFAF8
CEP131
DHRS12
MPPE1
CLIP3
CLEC5A
ZNF620
SIPA1
GP6
CENPI
FAM180B
NDUFS3
KBTBD4
LPCAT2
TAF12
MTPN
LUZP6
PLXNA4
NBEAL2
CCDC12
PRR5L
VSX1
ACSS1
NFE2L2
RGS19
OPRL1
LKAAEAR1
SUN2
DYRK1A
SLCO2A1
CYTH4
SLC24A1
INTS14
GTF3C3
C2orf66
GRIFIN
SAMD11
MAMDC2
ZNF595
CHSY1
TMEM262
FGGY
PCSK4
REEP6
PDE6B
TEAD3
IL16
NDUFS7
HNF4A
RPL19
CACNB1
TBC1D16
STING1
SMIM33
POTEH
ANXA6
CCDC149
CRH
ADRA2A
NFATC3
RXRA
SHANK3
NSA2
GFM2
MAPK6
LTB
LST1
NCR3
INTS12
GSTCD
HM13
SHANK1
CLEC11A
SEPTIN9
NEDD9
ZMIZ1
NCF2
FAM207A
ODF3L2
MADCAM1
TPGS1
CSNK1D
GTF2H2C
GTF2H2
RAPGEF1
VWA3B
ZNF852
GPAA1
EXOSC4
METRNL
NDST2
FBXO24
LRCH4
STXBP4
COX11
ZASP
SIGLEC8
SAP25
SLC39A4
CPSF1
CSRP1
GSN
CACNG4
CD300C
SIGLEC5
NRROS
CSK
STX16
ZNF207
C17orf75
PRRG2
NOSIP
FCMR
PSD2
TMED9
B4GALT7
RAG1
TRAF6
CMTM7
MAPKAPK3
CISH
ADA2
CEP112
SLC18A3
CHAT
GTF2H2C_2
DUSP7
LYN
EXT1
SNRPB
LYRM1
DCUN1D3
SPN
MILR1
STK32B
GBP3
MAF1
CYC1
WDR97
GRK2
ARPC3
RARA
RFLNA
PLEC
ARHGDIB
POLR2E
GPX4
ZNF565
GRPEL2
TOP3B
ZNF792
PHC2
PITPNM2
CCM2
TMEM45B
LMO2
DUS1L
SDF4
B3GALT6
TNFRSF4
LY86
WDR36
BCL3
FBXO11
SH3BP2
FOXI1
LIME1
SLC2A4RG
BAIAP2
PSMC5
FTSJ3
SEC14L1
CELF2
SERPINB9
MYO18A
POTEJ
MITD1
LAMB3
POPDC3
PGS1
RASGRF2
TEFM
RHOF
TUBB3
MC1R
PALD1
CCAR2
C8orf58
KLHL20
DGKZ
WDR11
CNPY3
ITGA5
CDK5RAP1
POLD1
NR1H2
TM9SF1
IPO4
IQUB
CD33
TNFAIP2
AATK
TGM5
AHDC1
RNASET2
SKIV2L
NELFE
MS4A15
UNC13D
SCGB1C2
VPS9D1
PPP1R9B
FZD9
C1QTNF4
SSBP1
CD82
SSB
HBEGF
SLC39A3
ADAM10
ZBTB10
ITGA9
FGF7
KRT80
F2RL3
STAB1
RORC
DPYSL4
NTMT1
UBE2J1
FLI1
NPEPL1
MMRN1
PYCR3
GFUS
NFKB2
TIGD5
EEF1D
PPIP5K2
GIN1
LPIN1
ZDHHC18
CLEC4E
PPIF
ERLIN2
ANKRD40
RMDN1
CPNE3
MRPL23
ZNF165
OR1F12
WDR55
DND1
IKBKE
SLC30A8
USP32
IL17RE
CA12
TPT1
ANAPC5
ASPSCR1
ARAP1
LAMB4
ACTB
TPD52
STX1A
WNT7B
STARD8
CLCA2
ACBD5
ARSG
SLC16A6
GATD3B
GATD3A
EMID1
GNG2
NR2F1
HOPX
SYNJ2
BAZ1A
BID
RFX2
RCSD1
STXBP5
LRCH1
PCBP3
SLA
KISS1
TMCC2
INAFM1
DLK1
EAPP
EMILIN1
OST4
KHK
ZFHX3
IL32
ASS1
PPIAL4G
KCTD12
CD300A
MN1
RAB3IL1
P2RX1
PLCXD1
SIRPB2
MTA2
TUT1
LIMS1
SNUPN
STAP1
HRCT1
SPAAR
CNPY1
AURKAIP1
DNAJB6
CCL4L2
WNT1
WNT10B
ADRM1
MAP1LC3B2
GIMAP1-GIMAP5
GIMAP1
SDCCAG8
CEP170
HHEX
KCNN4
RAD54L2
TFF3
UTP3
CDH23
ARHGEF12
SLC33A1
EDC4
MNAT1
LINGO1
TLCD5
UNC5A
WDR74
STX5
JRK
TSPAN10
NPLOC4
THUMPD3
USP3
GNAI3
ANKRD13D
GATA2
PGLYRP4
S100A9
MPO
PSCA
NT5C2
PXK
LPAR1
PCNX3
MAP3K11
DR1
IER5L
ZNF221
PHYKPL
GREB1L
RAB24
PRELID1
KBTBD2
ARHGAP30
NAPRT
MROH6
LHX6
HDC
AP3S2
COL23A1
DMAP1
S1PR4
NCLN
PROSER1
NHLRC3
DUSP6
ITGA4
KRTAP10-12
SEC14L5
TSPEAR
NABP1
TBXA2R
CXCL2
OR4K3
OR4K2
TRIP4
PCLAF
NFXL1
IFIT3
SERPINA1
NOL4L
NFE2
FASLG
TCIM
SLC16A3
SH3TC1
SLC43A3
TP53I11
MTMR9
HIP1
UBXN8
NAA10
ARHGAP4
PLPPR3
LAPTM5
SLC22A16
AZU1
TMPRSS9
LPIN2
CD36
LAMP1
TATDN3
NSL1
MRPL40
HIRA
ARMC7
ZFYVE28
CFAP99
NUP54
MRPL1
MAP3K5
TRAF3IP3
RFTN1
TBX2
ZMPSTE24
TMCO2
LMBR1
COLGALT1
CERS3
CHRNA1
STAT1
PHB2
GALK2
COPS2
TCTEX1D4
BTBD19
PLK3
PRLH
PPP1R27
MCRIP1
TM4SF18
MRPL21
IGHMBP2
NDUFB8
HIF1AN
PPP1CA
SLC44A1
TBC1D10C
CARNS1
ADORA2A
XCL2
MREG
PADI1
CIITA
ANPEP
ISLR
LINC01638
NDUFC2-KCTD14
NDUFC2
PPP1R15B
TRIB1
SEMA4B
ATP6V0E2
CXCL8
LILRA2
LHX1
ALDH8A1
GTF2H3
EIF2B1
GMCL2
CLTC
NUPR2
CHCHD2
MYEOV
CXCL1
TFAP2E
ELMO1
TXLNB
ID1
PDP2
SPOP
MLXIP
RASA3
RASAL3
SLC12A7
PSMF1
SF3A3
FHL3
ALG10B
RAB7A
CYREN
ACOT11
PSD4
ZNF467
PTPN6
C12orf57
SELENOH
LAMTOR1
ZNF408
ARHGAP1
TMIE
ALS2CL
C20orf203
BDNF
PTGR1
APOBEC3H
CRB2
COQ3
LCP1
C9orf62
ZBTB45
SLC27A5
SIRT4
MYL12A
TRMT6
MCM8
RPS14
LSM4
TAS1R3
INTS11
CPTP
MFNG
ATP2C2
RAB8A
TMBIM4
FERMT3
SLC22A14
LTO1
ZNF391
SPATC1
RHOH
CHRM3
SHISA7
JMJD1C
TBC1D19
GRB2
ATG16L2
COX16
DUSP22
TMEM154
RPL29
AGK
WNK4
VPS25
JUP
TIMP2
PDLIM2
NUP210
PSTPIP1
MEIS1
SYT7
IFITM1
IFITM2
CRACR2A
ARAP3
IFITM5
SLC16A2
TTR
DHRS7C
STX10
IER2
DGLUCY
RPS6KA5
MMP9
RNF165
ARHGAP28
SFTPD
LSG1
PLCXD2
IER3
FLOT1
NOXA1
MAP1S
PLEKHO1
NAIP
TBC1D3K
TBC1D3
RHOG
RAG2
IFTAP
IPCEF1
GYPC
TMEM72
KNDC1
HDGF
MRPL24
TNFSF9
CAPZB
HPCAL1
CCN4
POTEM
TRAF7
TNIP1
ZNRF3
GNPDA1
GHRL
RGS14
LMAN2
TMA16
ZNF570
ZNF569
ARHGAP45
ZP3
DENND10
ALOX5
SSC4D
NMNAT1
LZIC
TSSC4
KPTN
SDE2
SH3BGRL3
OSM
SIGLEC9
CCDC77
KDM5A
TUBGCP3
TRIM65
MRPL38
C10orf88
TMEM222
STYK1
CCDC170
CABP1
HPN
SELENBP1
PRRC2A
AIF1
PPIL3
NIF3L1
SEC22B
ZDHHC23
RPS6KL1
CSF2RA
ZER1
CASC3
ING4
PPP6R1
KCNAB2
TYROBP
NFKBID
HCST
GSR
PIK3CG
RASSF2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
GOLGA3
GNG14
PSD
FBXL15
DHPS
RGL2
PFDN6
EIF1AD
CST6
BANF1
WDR46
FBXW9
KLHDC8B
CCDC71
ZFP37
STIM1
PRR35
NHLRC4
PIGQ
INPP5D
BIN1
KLHL6
CXorf49B
CXorf49
GPR174
DIO3
GPR108
PDF
NIP7
COG8
GBA
CALHM3
ARL11
PADI4
ZNF384
DCTN4
OGFOD2
ARL6IP4
ANXA2R
CARMIL1
C1QTNF1
LIMD2
TM6SF1
KMT2D
MRPL39
BRMS1
RIN1
B4GAT1
MAML3
PARG
NUCB2
PTK2B
SAMD4B
GMFG
CSRNP1
ACCS
SPTBN1
UNC5B
TNKS1BP1
RUNX2
KCNQ5
ARHGEF7
TSNAX
MLNR
YIPF7
CALR
CFAP410
RAD23A
KDM4B
FARSA
PLEKHN1
KLHL17
PUF60
KLF5
PRUNE1
MINDY1
MCMBP
ATP6V0A1
TNFRSF10B
CDYL
PPIAL4H
SLCO2B1
PTPN7
RNASE2
DDN
CSF3R
DCAF12
RRP12
PIGV
ADA
KIAA0513
AKNA
TAGAP
MS4A3
UBE2V1
USP4
ST3GAL1
MEX3B
AOAH
TRPM6
DCP1A
MDM4
TOB1
NFKBIL1
DDX39B
ATP6V1G2
TTYH2
ZDHHC6
VTI1A
LAIR1
SH3BP1
PPIAL4A
FURIN
RASGEF1A
DVL1
CCNC
RSRC1
CHKA
AK1
SKI
FERMT1
PARVG
CMTM2
TNFSF8
MAGEF1
MXD3
CXCR5
SH2B3
RASSF4
DEPP1
CEACAM4
AP2B1
PEX12
VPS18
TSPOAP1
ADGRE1
BCAR1
TMIGD3
ADORA3
MRPL58
NR1H3
ACP2
TFIP11
ZNF550
GTSE1
PLD1
LOC112694756
C6orf136
DISP2
HSPB9
TLCD3B
RAC2
PHGR1
CHRNE
C17orf107
UNCX
CRHR2
MTRNR2L8
MAK16
ZCWPW1
PPP1R35
MEPCE
PODNL1
FKBP1A
TM7SF3
BMF
MED21
GRIN1
ETV6
RUNX1
UGCG
ARHGEF18
TRIM46
KRTCAP2
RAB27B
SLC26A11
SGSH
APBB1IP
PRCD
CYGB
GGTLC2
OPA1
IPPK
RAB18
RBM47
PPIAL4C
DAB2IP
SUCNR1
IL18RAP
CD7
STX18
SLC66A1
AKR7A2
CSNK1G2
KLHL33
AGRN
GPR88
CEP170B
EMP3
CCDC114
MRPL16
TBC1D14
ULK4
SENP6
EPS15
C3orf86
FAM163B
GPR6