ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
GNA15
RLF
ZNF684
CCAR2
C8orf58
IPPK
ZMPSTE24
TMCO2
PRSS3
EXO5
CD40
CD33
UBAP1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
CAP1
NCF2
ZFP69B
CMIP
MAP3K5
GRPEL2
MTMR9
LAMP1
B4GALT3
SH3BP2
CD1C
ALOX5AP
NDRG1
CAB39
GLRX
PSTPIP1
ITGB2
TEAD3
CSF1R
RPS19
ZDHHC3
EXOSC7
WDFY3
ITGAM
NFYC
LILRA6
LILRB5
NLRP12
RXRA
NCF1
LGALS8
SUN1
TMEM45B
MFSD2A
DUX4
VASP
STEAP4
DEFA1B
DEFA1
PNP
PIP4P1
RAB3IL1
ZNF696
VASH1
PGA3
NDUFS2
ADAMTS4
SNRNP200
S100A8
CDKN2C
FAF1
IL1B
RAB24
PRELID1
TLE3
DENND3
PGK1
SMAP2
AGTRAP
SPATC1
ZFP69
VTA1
NMBR
TSSC4
IL7R
CD244
PPT1
HBS1L
HAUS6
NLRP2
ABT1
MTF2
ITLN1
GPBAR1
AXL
EXOSC3
MRPS18C
HELQ
ARHGAP30
TRIT1
SP140
SP110
SETDB1
APOA2
FCER1G
TDRD10
SHE
PGA5
CITED4
CEBPD
PTTG1IP
FRG2
AKR1A1
FLI1
RMND1
ARMT1
EXT1
IPCEF1
TP53I11
GPA33
KLHL33
RASA1
SLC12A6
NUTM1
NOP10
PPIH
PGA4
SPDYE13
HDGF
MRPL24
SDCCAG8
CEP170
SLC38A10
PDLIM2
FCGR2B
ARPC3
TMEM154
SPDYE9
SPDYE8
SPDYE15
SPDYE11
RMDN1
CPNE3
COL9A2
SNAPC3
IL16
ZP3
SSC4D
DUSP7
SASS6
RNF149
NDFIP2
F11R
NAA80
IFRD2
HYAL3
MTPN
LUZP6
FCAMR
NUF2
UCKL1
MTRNR2L8
POMP
ZNF408
ARHGAP1
VCPIP1
C8orf44-SGK3
MMP9
PRR5
OR52K2
CCND3
LAMB3
UBR7
GON7
SRSF11
LRRC40
PDF
NIP7
COG8
ID1
TLE4
AKR1C3
CCL3
CCL3L3
CCL3L1
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
NUDT4B
SIGLEC11
ARPC2
FAM207A
RNPEP
GPR68
CXCL8
CTDSP1
PPIAL4F
PPIAL4E
PPIAL4D
FOXJ3
CMTR1
NUBP1
RASSF5
ZNF410
HIBCH
MIA3
DISC1
TDRD9
ATP5MPL
TESK2
MMACHC
CCDC163
RPL37
CARD6
SLC25A32
DCAF13
MSH6
FEM1A
VPS33B
RAPGEF1
RUNX1
UBAP2L
C1orf43
HEATR1
RWDD1
TFB2M
CNST
PAQR8
USP3
CEACAM21
TBL2
MRPL2
KLC4
CUL7
ATG5
TIGD4
ARFIP1
PPP1R12C
URM1
EIF3D
TOMM34
STK4
PTK2B
TRIM35
SORBS3
EIF2D
SELENOH
YES1
IFNGR1
EPRS1
ADGRE1
NOTCH2NLC
KHDRBS1
MEFV
ANKRD33
ZNF484
TMEM30A
CD79A
SUSD6
CBWD5
MAP2K1
USF1
TSTD1
RUBCNL
CD99
PCM1
MOB4
MTFP1
LOC102724770
DGCR6
CYRIB
RTF2
UBXN8
KRT36
KRT13
GABRR2
HMGB1
USPL1
TMEM59
MAP1S
KCTD12
MPL
UCHL5
RO60
NIBAN3
FCRL4
TNFAIP1
IFT20
INTS9
HMBOX1
TIPRL
DNAJC10
ADGB
DCP1A
CHMP4B
TMEM127
CIAO1
PAPOLB
PISD
MXD3
OAS3
TTC14
WDR70
NUP155
TOMM20
SFTPD
AOPEP
ARHGEF10
MRPS31
DOCK8
CD1A
GPAA1
EXOSC4
MED18
CPNE5
ZNF197
CPLX1
XRCC5
LYN
TPRKB
DCAF10
ARID2
LTB
LST1
NCR3
RAB7B
WDR55
DND1
SERPINB13
KIF5C
ZMAT2
HARS2
HARS1
LYRM1
CLIC5
SEPTIN9
TMEM104
NAT9
DUSP6
TGFBR2
SIGLECL1
TIMM21
FBXO15
SCRT1
DGAT1
AP2B1
PEX12
UXS1
SIGLEC16
INAVA
MDM4
STYXL1
C4orf3
TTC13
INPP4B
SCRG1
UTP3
KIFAP3
RPS2
RNF151
TBL3
NOXO1
EAPP
GTF2H2C
GTF2H2
CXCL1
UGGT1
STK10
VPS13C
CCL26
TAGAP
IKBKE
CCL2
ATP6V1C1
STK36
RNF25
RGS12
DMRT2
FPR2
FPR1
LCP2
SCAMP2
TNIP1
NFATC3
SIGLEC9
WDPCP
MDH1
OSCAR
NDUFA3
CBWD1
MYBL1
DUSP4
RNASE10
SLC33A1
NECAP2
MR1
ZNF517
ZNF34
RPL8
TEKT2
ADPRS
CTSB
CCL4L2
CTSG
NFKBIL1
DDX39B
ATP6V1G2
SCAF11
C6orf89
ARHGEF1
MAP3K7CL
CCT8
THAP6
UBLCP1
KBTBD6
TMEM53
ARMH1
NDUFS3
KBTBD4
FAM180B
ZNF622
TRABD2A
FKBP1A
WNK4
VPS25
RGL1
ARPC5
NOXA1
TRIB3
TMEM231
MRPS23
EIF2B3
TNS1
TPT1
NSUN5
JAML
ZDHHC19
ACTRT3
MYNN
RNF141
PRPF3
RAC2
SNX19
LRFN3
DR1
ASXL2
HAX1
RTCA
TFIP11
ATG16L1
MIDEAS
PDCD2
ZNF227
GCLC
B3GALNT2
DDO
TCF12
PIGM
EMILIN1
OST4
KHK
OSM
P3H1
FCAR
UBE2T
PPP1R12B
WNT2B
PEX3
ADAT2
N4BP2L2
GOLGA7
NOL11
CBWD2
SDHAF3
FAM167A
MTRNR2L2
MSH3
DHFR
PKD2L2
THEMIS2
OTUD7B
SPDYE16
PDXK
DENND4B
ROPN1L
SCAF1
RRAS
RPL27A
RRS1
ADHFE1
HM13
TADA1
TRPV4
VIT
PIGU
GOSR1
MTMR14
GALK2
COPS2
TPK1
TLN2
NOTCH2NLA
ARHGEF12
MFN2
AGGF1
FUCA1
SLC35B4
MFSD10
CALCOCO1
ZFYVE1
MTRNR2L1
ACSL3
MYCL
TRIP4
PCLAF
FBF1
CAPG
PLCXD2
PIKFYVE
MARCO
FBXO46
MEIOSIN
PSMD7
FAM120B
DPYSL2
TOR4A
FCGR2A
CCL17
SCRN2
MRPL10
LRRC46
OSBPL7
APPL2
SF3B1
RALB
OTULINL
CES1
ACAD9
KIAA0895L
EXOC3L1
E2F4
TATDN1
NDUFB9
ELMO3
CCDC102A
ADGRG5
ZNF780A
CEP350
SNX3
CHCHD5
GOLGA5
NAIP
KIF25
ZNF56
PACC1
CALHM6
ACVRL1
CLDN19
SEC11A
WDR61
PIGBOS1
PIGB
TCTEX1D1
STAU1
TMEM186
PMM2
WWP2
NOB1
MAMDC2
PHACTR4
ZNF331
TAF11
ANKS1A
PRKAB1
CSF2RB
THOC5
NME7
BLZF1
STARD6
C18orf54
CCNL1
GET4
CLPP
C1orf74
SLC22A16
FAM227B
DTWD1
CBWD3
THAP12
GVQW3
UCK1
FCGRT
FRG2C
SLC24A1
INTS14
TBPL1
PDPR
KLF2
GPR183
CAMK2N1
PA2G4
TAF12
SNRPC
ZNF142
BCS1L
PPIAL4H
GSPT1
ZNF337
CSRP1
MRPL17
ITGAL
KBTBD7
XRN2
IPO8
SRSF4
NR1D1
CHST13
FASLG
IBA57
NOL6
OPA1
SYMPK
FOXA3
UBL7
THOC3
TERF2
NFX1
SPDYE6
LOC100289561
DESI2
TPM3
DOCK10
TLE1
AP1B1
LMNA
WIPF2
PRKCD
HSPA6
UBR1
A2M
INTS1
MBD1
CXXC1
KATNBL1
UAP1L1
ANKRD39
MAN1B1
PLEC
SEMA4C
TOR1AIP2
TOR1AIP1
ARHGAP25
DAP
SUCNR1
OR8B12
JOSD2
ASPDH
RPL37A
GTPBP10
RPS6KA1
PPCDC
HK3
ORMDL3
GSDMB
PHB
BRIX1
YKT6
TMED10
FITM2
S100A2
CARD19
ELOF1
RPL27
IFI35
NOTCH1
DYNC2H1
DBI
C2orf76
DNAJC16
CASP9
TAF13
NAPG
ATP5PO
RAD50
ADAMTSL4
LAMTOR5
PLEKHO1
PICALM
HDDC2
PHC2
CCDC149
RPS6KA2
RANBP3
GUK1
GJC2
BRPF3
PGBD4
EMC7
HSPA13
DAZAP2
ATP6V1B2
PBK
NLRP3
LILRA2
SLC18A1
FLVCR2
MRFAP1
IRAK1BP1
TBC1D14
CFAP298-TCP10L
CFAP298
GLI4
EML6
WDFY2
C22orf34
SSNA1
ANAPC2
GTF2H2C_2
TMEM39B
CCDC30
ZMYND12
PPCS
SPG11
TECPR1
TRNP1
LYPLAL1
OAS2
NCSTN
COPA
SLC31A1
FKBP15
OCSTAMP
ZNF668
ZNF646
SF3A3
CIAO3
MED10
SLC37A4
IGSF10
SLC39A1
CREB3L4
CRTC2
NUP133
CASP8AP2
MDN1
TBC1D23
GNAI2
PUM1
ADAM10
TSN
RAB1A
HUS1
MTFR1
LTBP2
DEFA3
KCTD5
RNF14
TMX1
MLKL
TUBA8
NFAM1
EMP3
CCDC114
AFG1L
RRM1
SF3B5
PPIAL4G
CEACAM4
RPIA
MEF2C
BOD1L1
TCTE3
ERMARD
CALR3
C19orf44
AHCTF1
ZCWPW2
AZI2
NUP58
TLN1
CREB3
SUPT5H
RPS16
RPL29
RNF181
NR3C1
VAMP5
TOMM6
PRICKLE4
FRS3
PES1
TRAPPC4
RPS25
PPME1
C2CD3
ZNF697
TCN2
RPL5
VCPKMT
C1orf54
APH1A
VPS26C
SDHC
MPZ
LMBR1
RGPD1
RGPD2
BID
BOD1
COPB1
SMIM22
ROGDI
ANXA2R
SEMA4B
OBI1
CPVL
CHN2
ADORA1
ACP3
SV2A
BOLA1
ADSS2
CATSPERE
ETNK1
TRMT11
C1orf198
SYNE3
SBNO2
GOPC
TOX2
MAPKAPK2
CTU1
GTF2B
RHEX
ZFP64
ADAP1
C5AR2
SLCO2B1
CCL22
MRPL55
FRG1
DNAH14
CD48
SIGLEC6
ATG7
SYNGAP1
CUTA
PHF1
GNPAT
C1orf131
CSNK1A1
MED23
ENPP3
RPL22
RNF207
SART1
SRP9
ZNF614
SLC1A5
NBR1
IFI16
GIMAP8
CTDP1
ZW10
CLDN25
ZNF350
IL6R
CTNNBIP1
RD3L
HCRTR2
MRPS35
SRPRA
OCIAD1
DECR1
SNAP47
JMJD4
CBWD6
KIF15
KIAA1143
PRRT3
RAB44
DHDDS
UBE2V1
CERS2
ANXA9
KIAA0513
PARVB
IL1RN
PPP2CB
GRK6
YIF1B
KCNK6
NKAIN1
ZC3H6
ADAM17
TRIM37
ZNF513
SNX17
EIF2B4
LTN1
LTA4H
RSL24D1
NGB
XRRA1
SPCS2
MTMR6
PGLYRP4
S100A9
VIRMA
SH2B1
TUFM
PUM3
NECTIN4
SEC14L1
GTF2E2
LAPTM5
CNOT1
DEXI
CLEC16A
NOTCH2NLB
NKIRAS1
RPL15
ZWILCH
SNAPC5
RPL4
SKP2
LMBRD2
SLC35F6
MEN1
MAP4K2
TRIP11
CHMP7
EEF1AKNMT
NPIPB15
ARID3B
FIGNL2
CTNNB1
COPS8
MED4
TBRG1
ZNF12
C1orf100
RPL36
MICOS13
HSD11B1L
NUDCD1
RIC8B
ZNF140
GZF1
WNT10A
NDUFC1
NAA15
PLA2G15
ESRP2
CHMP5
BAG1
LCP1
KCNIP1
CCDC146
GGPS1
ARID4B
LAMTOR1
ABCD3
ZNF318
STON2
RPS7
PPP1R11
POLR1H
RNF39
CGAS
MTO1
RNF157
SYT8
TNNI2
CASS4
LILRB4
USP15
MRPL44
DCPS
ZNF397
ZNF221
ABCA3
RPS20
HIGD2B
BBS4
LOC112267881
LOC102725023
KIR2DS2
KIR2DS1
KIR2DL3
KIR2DL2
KIR2DL1
DOK3
DDX41
TTYH2
RPL38
ORC5
AHI1
COX7A2
RBM47