ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637469 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◣ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

CALCOCO1
NPRL2
TMEM115
CYB561D2
NAA80
IFRD2
HYAL3
PEBP4
TCEA2
FEM1A
CALR3
C19orf44
TSNAXIP1
RANBP10
FRG2C
SMPD3
HDGF
BTRC
MRPL24
CDPF1
RHEX
TESK2
MMACHC
CCDC163
PHB
NUDCD1
UCKL1
CLPB
PRCC
UTP3
ARHGAP35
AP2S1
ALDOC
KBTBD6
ATP2C1
C1orf159
ST3GAL2
KBTBD7
PPIAL4C
GPBAR1
PNKD
AAMP
HIKESHI
NFE2
TMEM236
PI16
VARS2
GTF2H4
PKIG
RPL36
MICOS13
HSD11B1L
HHIP
GSPT1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
ATG4D
PAFAH2
ING3
IL33
AGBL1
ZNF704
EMILIN1
OST4
KHK
CHMP4B
ARHGAP39
PHF12
CD82
PLCL2
AHCYL2
CCDC146
FBXL12
TOX2
SLC4A2
CDK5
ASIC3
WDPCP
MDH1
ZFYVE1
HPSE
BOD1
PCDH10
RASSF1
ZMYND10
CYTH1
PPP1R16B
BANP
INTS9
HMBOX1
IL17A
PEMT
MAD2L1BP
GTPBP2
CALR
RAD23A
FARSA
NKAIN4
C3orf86
LOC102724770
DGCR6
UBR2
PPRC1
EAPP
PPP1R12C
LZTFL1
SCAF1
RRAS
CST5
TPST2
LTB
CTSH
LST1
NCR3
RTL3
SLC39A1
CREB3L4
CRTC2
CCM2
NUPR2
CHCHD2
DUX4
RUBCNL
PPIAL4G
CXCR5
GLG1
ZNF331
STK17B
GNA15
STAU2
PARL
ARHGAP25
ALDH1A2
NPIPA1
ZNF225
SEC31B
SRPK2
GRAP2
STATH
CD300A
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
IQGAP2
NFRKB
CCBE1
ARHGEF7
NTAN1
UNK
H3-3B
UBQLN4
LAMTOR2
ZNF444
KCTD9
CDCA2
BAIAP2
CRYGN
SUFU
ACTR1A
LAIR1
LRP2BP
CR2
ORAI2
CD1A
APBA2
H2AZ2
CXCR4
ZNF140
RNF144A
SLC2A8
ITGA4
VCPIP1
C8orf44-SGK3
RBL1
TAF12
CTU1
TSSC4
DGKA
PYM1
VSX1
DSTYK
TMTC3
CEP290
PHF13
HECTD1
HEXA
TESPA1
GATB
PTPN6
C12orf57
VIPAS39
AHSA1
SLC35B4
OR4D1
FXYD2
PANK4
HES5
CHD1
CD1B
KCNC2
ARL17B
ARL17A
KMT2B
SEPTIN9
MSL2
ACADM
DEFB136
ZNF337
INVS
ERP44
EGFLAM
PRKD2
NPIPB15
SLC2A6
LSM4
GSR
EPHX2
GFRA4
WDR74
STX5
SHQ1
TLR9
FMNL1
GRAMD4
SYNJ2
SYMPK
FOXA3
FRG2
VPS50
HEPACAM2
NRROS
EPHA2
CCDC200
TNIP3
DCLK3
SELENOW
ZSCAN22
NOP53
PSMF1
GPD1L
ADA
NBEAL2
CCDC12
OR10T2
TIMM21
FBXO15
BIRC5
FAM193A
PRR22
DUS3L
LARS1
FBXO48
APLF
SLA
DDX23
RIC8B
PVRIG
MDM4
FBXO46
MEIOSIN
PTAFR
LAT
SPNS1
RANGAP1
SEC14L2
ARHGAP24
ZNF784
BHLHE23
NMT1
DCAKD
FBXL19
UBE2T
PPP1R12B
MAP1LC3B2
SSTR3
PYCR3
GFUS
RABAC1
KRTAP17-1
KRTAP16-1
KRTAP29-1
ZFYVE19
DNAJC17
RPS7
PLXNA4
CD69
LDLRAD4
RGL4
HDAC7
PYGM
WNK1
UNKL
C16orf91
PERCC1
SLC9A3R1
RAB37
FAM53B
KANSL1
KRT10
CCDC90B
TGM6
TAS2R50
N4BP2L2
JOSD2
ASPDH
GPKOW
MED23
ENPP3
ZNF500
NAPA
TMEM107
TNFRSF13B
H6PD
THYN1
ACAD8
BNIP3L
APBB1
EMP3
CCDC114
SOX17
FBXW11
MX2
TMEM70
ELOC
ANGPT2
NUF2
TNFAIP1
IFT20
WFS1
CHPF2
ABCF2
RCSD1
MND1
SOX6
C11orf58
PRPF40B
NEK8
TRAF4
RIPOR2
ITGA6
CAMK1
KIF2C
TTC28
SHISA5
HHEX
FMO1
TNFRSF4
TNFRSF18
TFEB
FGR
GSK3A
MTIF3
ASB2
AFF3
CDKN2C
FNTB
SLC12A6
ABHD12B
TRIB1
BUB1B
COL20A1
LEF1
RETNLB
SCRIB
SYTL2
OSER1
OSBPL5
THEMIS
HRH2
FAM3B
PEX14
DFFA
STK25
PPIAL4F
PPIAL4E
PPIAL4D
ZNF513
SNX17
EIF2B4
RPIA
SMAD2
CHCHD3
COX7C
SMARCAL1
RFX8
TSC1
GFI1B
SSBP1
ORMDL3
GSDMB
AP2M1
CAPN15
SNX9
POLDIP3
IL32
CDK8
ZNF736
SCGB1C1
ODF3
SIRT2
NFKBIB
IL17RA
SIRT4
ZNF165
OR1F12
NSFL1C
ABRACL
PRRG2
NOSIP
CCDC69
SLC47A1
HSPA13
DRC7
MRPS18C
HELQ
ZNF354C
PEX3
ADAT2
ARHGEF3
UBE2J1
GNGT2
ABI3
BORCS7
DRAP1
C11orf68
FOXN1
DESI2
DEGS1
PSMA6
TRAF3IP3
IKZF3
LMO2
H4C12
H4C11
H2BC15
H2AC15
PTPN3
USP7
SLC33A1
MYO1G
TES
FAM222A
PTP4A2
STAU1
TMEM245
STX6
PTCRA
ERGIC1
RTTN
NOS1AP
SPATA46
C1orf226
PTCH2
ZNF605
ICAM2
SLC4A8
GALNT6
AURKAIP1
NAA10
ARHGAP4
RHOH
ZNF335
CANT1
ZSCAN25
COPS4
PROB1
SLC23A1
MZB1
DEXI
CLEC16A
ZNF354A
WT1
YBX3
PTK2
ERAP1
AHSP
RPGRIP1L
FTO
RIPK4
MED15
TOR4A
DDX4
PCNX4
ZNF230
CDT1
NME1-NME2
NME1
SERHL2
CCP110
GP5
F13A1
FASTKD1
ARHGEF12
B9D1
MAPK7
MFAP4
SMO
RCAN1
ALG10B
RHOQ
ATP6V1E2
CDK5RAP3
TLE3
LAMC1
ACSF3
ANKLE2
TMEM59
PADI1
TTI2
RNF168
SMCO1
EVL
NCOR2
GZMA
CDK5RAP1
KRR1
ATXN7
RBM38
LGMN
MRPL1
TM9SF1
IPO4
UBE3C
PEX26
ATP6V0A1
TNFRSF1A
CBFA2T3
SYT12
HEMGN
GFI1
CFAP20
ADORA2A
MAPKAPK3
RUFY3
ZAP70
COL6A2
EIF3F
INTS12
GSTCD
TFPT
PRPF31
WDR87
SIPA1L3
ATP11B
FHAD1
PPIAL4A
CXorf49B
CXorf49
BCL3
NSMF
PLCG1
SMAD7
EPHA1
DNTT
NEIL3
PHF19
MTF2
SF3A3
CCND3
TAF8
TENT5C
PPP1R2
TPGS1
ESYT2
TBC1D21
GABARAP
PHF23
DVL2
DYNC1I2
BCL9
TTC13
EVPL
ERF
TTC33
ZNF749
PALLD
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
COX16
MKRN3
STAP1
ZNF133
REPIN1
USP3
RB1
SPON2
AQP3
FCGR2A
FAM185A
ASXL1
FIGNL2
CCDC150
PPP1CA
THBS4
ETV3
TBC1D10C
CARNS1
RPS20
MEIG1
WBP2
FILIP1L
C20orf141
TMEM239
RASSF5
MMP9
TFAP2C
FAM228B
TP53I3
SF3B6
SPC25
TRAPPC3
MAP7D1
RAB1A
VPS37B
KCNN2
TTBK1
RPP40
ATAD2
TRIP4
PCLAF
TMC8
TMC6
TJP1
PARP16
NET1
ZNF56
ATF6
CCDC138
C20orf203
ASPRV1
NDUFS7
C5orf38
IRX2
D2HGDH
MXRA7
DPEP1
ALG10
CCL1
CCL13
PLAAT5
SLC25A19
ZNF408
ARHGAP1
TMEM101
CD47
BLK
CCAR2
C8orf58
ZFYVE21
XRCC3
CNOT6L
PTDSS2
ANO9
ARHGEF18
RLN1
CD3E
AKIRIN2
MYO18B
RASAL3
PSMD11
TBC1D31
FOXP1
DUSP2
ASTL
TGFBR1
CISD3
TMEM45B
VOPP1
SNAPC3
DHRS11
ZBTB45
SLC27A5
BRF2
RCBTB2
LSM5
ZNF350
TRIM47
CTDP1
CHMP7
FCRLB
CEP85L
MARS1
ARHGAP9
TLR6
ZNF224
POMT1
SNRPD3
GUCD1
EPSTI1
CSTA
MAMSTR
NFKBIZ
POLD1
NR1H2
MRI1
C19orf53
CNIH3
ARHGAP32
AEBP1
CIC
NUDT13
MCFD2
TTC7A
CCNG2
EHF
BCAR3
BICD2
ZNF227
TMEM127
CIAO1
NOP16
HIGD2A
LCK
ARID3B
RORC
MRPS26
GNRH2
MAP3K8
SLC35E1
GUK1
GJC2
RPL18A
PPIP5K2
GIN1
YIPF2
TIMM29
TAF1C
ADAD2
VAT1
RND2
SLFN12
CLP1
YPEL4
TTF1
CFAP77
CAVIN1
ZNF226
ZNF223
ARHGAP27
NOL11
ZNF354B
CYB561
DBNDD1
FCGBP
B4GALNT4
SUSD3
NOP14
GRK4
PA2G4
ZMAT5
UQCR10
DYNLT1
ASAP1
CHST12
MTMR9
NUCB2
SH2D3C
CDK9
TLE4
DCP1A
ARL5C
ZNF595
MYLK4
CNOT4
ALDH2
CACNA2D4
LTA4H
HIP1
TCF7
CAMK4
DPP6
ACOT7
BUB3
HMX2
JRK
DTX2
IDNK
USP48
RALGAPA2
ZNF169
DDAH2
CLIC1
MSH5
ZFYVE28
CFAP99
REXO4
ADAMTS13
ACTN4
TSC22D4
NYAP1
BPI
SNX1
CIAO2A
ENOX2
MBNL1
TMEM229B
AFF1
GNG12
RPL29
SMUG1
FKBP5
ARMC12
TMEM262
RPS26
EPAS1
PPIAL4H
TNPO3
SMIM3
STX18
RPL23A
RAB34
TLCD1
PROCA1
THAP11
NUTF2
CENPT
PNLIPRP3
NDUFB8
HIF1AN
ZNF101
ATP13A1
ZNF548
UBE2F
MRPS31
ZCCHC8
MEN1
MAP4K2
LRFN3
ESCO2
ATXN1L
CXXC5
PIH1D1
ALDH16A1
WDR24
SLC17A7
STUB1
JMJD8
LAMC2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
NDUFS3
KBTBD4
FAM180B
ASNS
MKNK1
ACTA2
MOB3C
KCNA2
DFFB
CEP104
ZNF652
TMEM163
SUGP1
MAU2
NUP107
MAX
TOR1AIP2
TOR1AIP1
PEX5L
IFIT3
BIK
ZNF527
RPL27
IFI35
RPS13
ZBTB46
DLC1
FAM168A
AGK
HIPK1
ADGRE2
ZP1
ZSWIM9
LIG1
NOTCH1
CHSY1
LSG1
FCGR1A
S100A5
S100A4
S100A6
S100A3
DHX16
PPP1R18
NRM
RBM6
MON1A
GALK2
COPS2
SCML4
ARHGEF1
TOMM34
STK4
RNF166
CTU2
CDK5RAP2
VPS41
TSC2
NTHL1
NANOS3
IL23R
OSCAR
NDUFA3
TSPAN14
ZNF343
SETD1B
ZNF789
ATP5MF-PTCD1
ATP5MF
DNM1L
NSA2
GFM2
PLAC8L1
GGA2
DOK2
XPO7
ZNF207
C17orf75
ZNF821
PDE6D
COPS7B
ZNF37A
H4C3
H1-6
SRMS
FNDC11
FAM163B
TMEM41A
MITD1
CYP2U1
DEK
GPR15
CLDND1
ZNF420
TFAP2E
TRAF7
RAB26
ETFDH
C4orf46
DAAM1
KCTD5
RTN4
SBNO2
STING1
SMIM33
MICAL1
IFI6
MLEC
UBAC1
AGPAT3
LIG4
ABHD13
ATP2A3
TMEM258
FEN1
ACTR3C
PCNP
TRMT10C
PRKCI
ZNF329
TMEM208
LRRC29
MYL6B
MYL6
NIBAN3
SWI5
GOLGA2
LMNB2
AQR
ZNF688
XCL2
SPDYE17
MTRNR2L1
REEP5
ITGAL
SBF1
LMTK2
TNFRSF10A
ALKBH3
STMN3
RTEL1
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
DPY19L4
SNRPB
RBBP5
ZW10