ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20230568 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◣ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

MTF2
CTNNB1
CLTC
B4GALNT3
CALM3
PPP5D1
SCGB1C2
NAGPA
SCGB1C1
ODF3
CCDC88A
NECTIN4
STX18
BRWD1
TSC1
GFI1B
NOTCH2NLC
SOD2
WTAP
ZKSCAN2
MRPL21
IGHMBP2
MRM3
GLOD4
LRP6
ATAD2
KCTD9
CDCA2
KMT5B
CCNL1
NOTCH2
WASHC2A
CKS2
SECISBP2
HEXA
MAPKAPK5
NOTCH2NLA
IPO11
DIMT1
LAMP1
KMT2D
RHEBL1
WASHC2C
KPNB1
TRIP4
PCLAF
TRIAP1
COX6A1
CALM1
LAT
SPNS1
NMNAT1
LZIC
POLR2J3
PDE6D
COPS7B
ATG14
ZC3H6
SUPV3L1
PHIP
ALKBH3
RASEF
TET3
CALM2
WASHC5
NSMCE2
HEXIM2
EIF2D
STX16
FOXJ3
DDX23
TMEM199
SEBOX
POLDIP2
PKM
VPS33A
TMEM242
TMEM41A
UBE2B
CDKL3
UBE2D3
IDH3B
GPAM
TOMM22
RDH5
ITGA7
BLOC1S1
CYP51A1
GATB
GTF3C5
TIMM22
DUS2
DPEP2NB
DDX28
NUP214
WDR53
FBXO45
PEX3
ADAT2
ADNP
NCBP2AS2
NCBP2
IST1
DNAJC11
SPATA25
NEURL2
CTSA
ZSWIM1
FAM180B
NDUFS3
KBTBD4
POLR3F
DZANK1
TCF3
MRPS35
HMGCL
UBQLN1
NXF1
SPTLC1
RCL1
ZFAND2A
MRTO4
EMC1
SLC44A2
NOTCH2NLB
TRIP12
FBXO36
POMZP3
OGT
RBM42
PRSS22
PNRC2
DIP2A
VIRMA
ARHGEF12
HOXD9
HOXD8
CDKN2C
FAF1
MTMR2
AJUBA
CCNG2
TSN
TOB2
CYCS
RCOR1
SAP30BP
RECQL5
GTF2H3
EIF2B1
SSNA1
ANAPC2
MCM7
AP4M1
MED23
ENPP3
DDIT4
HAGH
FAHD1
KDM4A
ZNF518A
CCDC77
KDM5A
OPA1
ATXN2L
TSFM
EEF1AKMT3
SPRED1
GABPB1
PINX1
VCP
FANCG
PBLD
HNRNPH3
MEF2A
CFAP20
PEPD
C8orf33
TMEM222
TRMT61B
IP6K2
TSR1
SGSM2
SFSWAP
RPS2
RNF151
TBL3
NOXO1
CCDC59
HMGB1
USPL1
MFN2
ERAL1
MRPL39
SEC13
MCU
USP30
TAS1R1
NOL9
COPS8
SLC7A6OS
PRMT7
CHPF2
ABCF2
OAZ3
MRPL9
ACOX3
TRMT44
DBNDD2
MAGOH
ZNF212
GRHL2
SRSF11
LRRC40
PTEN
KLLN
PNRC1
RPS28
NDUFA7
PHAX
ALDH7A1
SMN2
SMN1
ADPGK
ATF4
DCP1A
UBC
NOC4L
DDX51
TBRG4
PIK3R3
NUF2
SRSF1
TAF5
ENDOV
VPS37A
CNOT7
RFXANK
BORCS8
RPP30
TMEM262
ZFPL1
CDCA5
TIMM21
FBXO15
PDCD4
BRF2
PCID2
CUL4A
TCF12
SNRPC
TDG
C12orf73
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SUMF1
ZNF721
PIGG
PIK3IP1
NOL10
DSTYK
NSFL1C
TOP3B
SPRYD4
KCNIP2
PSMD3
PRR5L
COMMD9
CHCHD1
ZSWIM8
FUT11
RPL22
RNF207
MAGOHB
COMMD1
CCT4
SNRNP70
DOHH
FZR1
CCNI
GTF3C3
C2orf66
NDUFS7
TSR2
MRPS15
UBE3B
FANCD2
NDUFC2-KCTD14
NDUFC2
TOP2B
DYRK1B
RBL1
CORO7-PAM16
CORO7
DNAJA3
CFAP410
EIF4A2
KCTD5
PALB2
DCTN5
MED4
TRMO
DPP8
BRIX1
ZNRD2
FAM89B
EHBP1L1
TMA7
CCDC51
ATRIP
MIS18A
HBS1L
COQ7
DOLPP1
NDUFB8
HIF1AN
C5orf51
ZNF789
ATP5MF-PTCD1
ATP5MF
NOP14
GRK4
THOC1
DNAJB12
SNRPD3
GUCD1
MARCHF8
CMTR1
CASC3
ATG7
MAML3
MRPS11
MRPL46
CRBN
RERE
HSP90AB1
FUS
CWC25
ZSCAN22
PTPN6
C12orf57
BECN1
PSME3
COMMD4
PAFAH2
MYBL2
RPUSD4
FAM118B
CHD2
CCDC86
METTL1
CYP27B1
PACSIN3
ARFGAP2
PPWD1
CENPK
ZNF585B
ZNF383
CLCN7
FAM149B1
ECD
ITGB3BP
EFCAB7
PLEKHM3
ZCCHC4
IL4I1
NUP62
ATF5
TEFM
TOP3A
SMCR8
CBWD2
PFKM
SENP1
SESN3
MRPL58
RANBP6
KIAA2026
FRA10AC1
ATP8B1
MRPL4
ATG9B
ABCB8
MPHOSPH10
MCEE
NUP160
SRP68
ZACN
GALR2
ZC3H3
TACO1
SLC3A2
DNTTIP2
THUMPD1
U2SURP
PRTG
EDC3
ABT1
MRPL55
MOB3A
IZUMO4
ANKFY1
PARL
TFIP11
VAC14
C6orf132
NDUFAB1
SDHB
BRAP
ACAD10
UMPS
PDCD6IP
PRKACA
STYXL1
MXD4
NDUFB5
MRPL47
DDX46
TATDN3
NSL1
SPATC1L
TGFBRAP1
C2orf49
GNAL
CHMP1B
HNRNPAB
CNOT1
MYLIP
TPRN
TMEM203
NDOR1
ITFG2
ULK2
DCAF8
CCNC
FAM187A
EFTUD2
CCDC103
BRMS1
RIN1
B4GAT1
TARBP2
MAP3K12
NPFF
GPN2
GPATCH3
DOK3
DDX41
GSTA4
CLDN4
GHITM
SLC35B1
FAM207A
C12orf43
CLN8
LMTK2
PARPBP
NUP37
NUP54
SH3GL2
GSTO2
OXNAD1
DPH3
NOL11
MRPL44
HPS5
GTF2H1
SLC24A1
INTS14
SENP2
RARS2
ORC3
PPP4R3B
BCKDK
KAT8
HOXD10
COA6
WDR4
FAM76B
CEP57
NDUFV1
USP42
AP5Z1
IARS1
FAM204A
JMJD1C
MRPL48
PEX14
DFFA
YPEL2
VCPKMT
SMPD4
MZT2B
DDX19A
TMEM208
LRRC29
WDR25
WARS1
ARHGAP40
BMS1
CCNH
PHF5A
ACO2
FAM98B
PELP1
ARRB2
SLC25A53
FAM199X
ARNTL
PPT1
TXN2
BRPF1
STOML2
PIGO
FAM214B
TMEM79
SMG5
NCAPD2
MRPL51
CCDC43
FAM133B
TSR3
GNPTG
RPS26
OR6B2
NDUFA10
ASH2L
RPLP1
C19orf48
DPP9
COMMD2
EXOSC8
ALG5
STXBP2
PCP2
XAB2
FAM156A
FAM156B
MED9
RANBP2
PPIL4
DHX40
RWDD1
SF3A3
RLF
PRDX1
FBXL12
UBL5
ZNF540
ZNF571
GOSR1
ACAD9
TJAP1
PSMB2
PKP1
AP1G1
EXOSC3
AARS2
TTC4
TMEM184A
TBCCD1
DNAJB11
RGS14
LMAN2
EIF4A3
VPS11
ABRAXAS2
EEF1AKMT2
DCAF10
SARAF
XPO4
MRPL37
CYB5RL
AAR2
CLDN6
TOMM6
PRICKLE4
FRS3
CLDN9
ELF2
METTL9
SEC62
ACSL3
LRRC57
HAUS2
TIGD6
HMGXB3
RTF2
RNF121
LOC100133315
CHD4
ATXN2
UNKL
C16orf91
PERCC1
PGS1
ARRDC4
PI4K2A
MORN4
VAMP1
PISD
YIPF6
AARSD1
TSPO
MCAT
TIMM17A
LMOD1
RPS6KB2
PTPRCAP
TROAP
SLC25A10
MRPL12
SRRD
HPS4
SPTY2D1
XRRA1
SPCS2
RCOR3
FAM227B
DTWD1
SART1
TRIP11
UBB
OSCAR
NDUFA3
NUS1
KDM5C
UBN1
GLYR1
TBC1D22A
RPS5
RTTN
ZSWIM7
TTC19
PMPCA
ENTR1
TAOK2
ZW10
CLDN25
UHMK1
SCRN2
MRPL10
LRRC46
OSBPL7
MRPL18
TCP1
ZC3H10
RPL41
ESYT1
POLG2
DDX5
MANF
RBM15B
C1D
WDR11
UBIAD1
MOB4
CDKN2AIPNL
MCCC1
TMEM217
TBC1D22B
CACTIN
RAD51AP1
C12orf4
CDS1
UNK
H3-3B
FEM1A
COQ10A
ANKRD52
TSPAN31
PPP1R8
MARCHF9
CDK4
AGAP2
POC1B-GALNT4
GALNT4
HDAC10
TUBGCP6
SLIRP
ALKBH1
POLR2J
API5
CRYBG2
SLC25A26
DCP1B
MRPS16
DNAJC9
SMIM13
SKA3
MRPL57
ZWILCH
SNAPC5
RPL4
RNASEH2C
KAT5
TFRC
CBWD5
GOLGA3
BORCS7
ZNF614
RPLP2
PNPLA2
PIDD1
EXO5
COQ9
CIAPIN1
SRSF7
G3BP1
LAS1L
NDUFB6
TBCB
POLR2I
OVOL3
MRPS23
LDAH
TSPYL2
STN1
COL12A1
ALDH3A1
LTO1
CNP
PNPT1
TIMM50
BSDC1
RPL6
PTPN11
ZNF207
C17orf75
MRPS7
MIF4GD
GGA3
JPT1
C16orf89
ALG1
TAGLN2
RAD54L2
CCDC97
GGCX
SNRNP200
UQCRC1
PTCD3
POLR1A
ATP6V1G1
AMD1
CDK5RAP1
RTN4RL1
DPH1
WDR61
PSMF1
NBPF1
SUPT5H
RPS16
MRPL27
EME1
RBBP8NL
LSP1
REXO4
ADAMTS13
PA2G4
S100A2
NME1-NME2
NME1
CANT1
RPTOR
JRK
CAAP1
TSSK4
MDP1
CHMP4A
VDAC2
EIF3F
NUP42
GTPBP10
NAT10
MON2
TENT5C
ZSCAN30
BOD1L1
TOB1
DIABLO
DPY19L4
RRM1
CCAR2
C8orf58
TNKS
BAGE4
BAGE3
BAGE
ID2
NOL7
PLK2
GNB2
CBWD1
TMEM128
MAGEA3
NLK
NOLC1
SMIM12
PSMD7
SAR1B
GPATCH1
MMUT
CENPQ
MTIF2
AP3S2
HDAC6
ZGPAT
ARFRP1
PRPF40A
ARL6IP6
TMEM258
FEN1
ZNF800
KRT80
COG2
GART
FREM2
PKN2
RBM28
WDR70
NUP155
ZSWIM6
AURKAIP1
CBWD3
FBXW2
DDX1
ZC3H15
ZNF326
GCHFR
RMDN3
THRAP3
PGBD4
EMC7
DNAJC19
ZNF839
CBWD6
LSM5
AVL9
GOT1
DCAF1
NMT1
DCAKD
MRPS31
SETD3
CCNK
SMAGP
TMEM190
TMEM238
RPL28
LONP1
CATSPERD
NABP1
KDM4D
CWC15
NUDT15
METTL2B
H2AX
DPAGT1
HMBS
USP8
FAM53C
CDC25C
TEPSIN
NDUFAF8
CALCOCO1
RAD18
AMOTL2
SCFD1
PET117
KAT14
REXO1
LANCL2
SCNN1A
LTBR
UBE2D2
GARS1
KLHL12
AP5S1
TBC1D19
ARF4
PSTK
PSMD6
ARL8B
ARMC8
NOP9
DHRS1
LTB4R2
CRCP
ZNF148
BAZ2A
ATP5F1B
MOGS
UQCC3
LBHD1
UBXN1
MRPL53
CENPBD1
RUVBL1
TRMU
EEFSEC
SF3B3
COG4
RASGEF1B
ZNF335
MRPS17
GFM1
POLR1F
STMN3
RTEL1
CALR
RAD23A
CHERP
POLE3
C9orf43
ALAD
DRG2
SSU72
NME6
RBSN
CLTCL1
PEX26
GTF2I
KLF5
AASDH
PCBP2
FBF1
CSRNP2
CHSY1
PSMD12
LDHA
TUFT1
INTS13
FGFR1OP2
PCNA
TMEM230
TMEM248
TMEM254
BBS1
NUP93
KIAA1522
SRPRA
MAP3K7CL
CCT8
CCT2
ZFAND5
EIF1
FAM161B
COQ6
C6orf226
TMED2
MAGEA2B
MAGEA2
CSAG3
ZBTB45
SLC27A5
WDHD1
SOCS4
UBN2
NUP133
RNF6
TRUB1
CCDC130
TSG101
NAA80
IFRD2
HYAL3
MDM4
TMEM126A
NDUFA11
VMAC
SKIV2L
NELFE
MVD
ISY1-RAB43
ISY1
ATP6V0D1
AGRP
GXYLT1
GET3
AVPI1
TAF3
TMEM14A
RPL3
CBLL1
ECSIT
CNN1
CASP8AP2
MDN1
VCL
RPS3
PSPH
CCT6A
TYK2
MTHFD2
RPLP0
GCN1
WDR43
FAM122A