ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MTRNR2L2
MSH3
DHFR
PHC2
NUF2
KIF5C
COL23A1
MTRNR2L8
FRA10AC1
MTRNR2L1
EIF2D
DSTYK
GBA
TAF12
DUX4
DCP1A
TRIP4
PCLAF
S100A2
H1-2
TMEM107
RAD54L2
STX16
EAPP
HMGB1
USPL1
DRG2
PTPRN2
CDK5RAP1
RBBP5
TBC1D19
POLDIP3
SCAND1
CWC25
SF3A3
NDUFS3
KBTBD4
FAM180B
H4C12
H4C11
H2BC14
H2AC14
RPL37
CARD6
SMARCD2
DHX8
ANKRD35
RPS7
SAR1B
RPS2
RNF151
TBL3
NOXO1
WDR74
STX5
ATP5MC2
STX18
TMEM167B
H4C6
H1-3
H3C6
S100A14
S100A16
CTNNB1
AP3S2
NME1-NME2
NME1
TRIAP1
COX6A1
SLC24A1
INTS14
MRPS23
H2BC21
H2AC21
H2AC20
PTPRH
PLEKHM3
RCAN1
MTF2
GEMIN7
ZNF296
CCNL1
UTP3
ZBTB45
SLC27A5
SELENOH
TTC26
RGPD1
RGPD2
CRB1
NBPF1
NIBAN2
UCKL1
DMAP1
BNIP1
H3C13
H2BC18
NTSR1
SECISBP2L
STN1
PARP16
MAN2C1
MLEC
MITD1
RPS6
SERPINE2
GTF2H2C_2
GTF2H2C
GOLGA7B
SSBP1
RAB5IF
STAT3
SNX24
ERCC1
CCDC200
SIRT4
DPP9
TATDN3
NSL1
FAM3C
AURKAIP1
MTA2
TUT1
LAG3
WDR36
YWHAE
PPP6R1
YIPF2
TIMM29
LRRC37A3
H4C7
H3C7
FXYD3
LAMP1
NDUFB10
RPL3L
MYO9B
HAUS8
GTF2H2
INTS12
GSTCD
ATF6
WWP2
NOB1
SMG8
TSEN15
SLC27A1
RPL12
LRSAM1
EFCAB2
NPAS4
FOXJ3
PSMD3
PSMF1
RBM15B
MANF
TBC1D13
MDM4
H2BC5
H1-4
POLG
SNAP47
JMJD4
CD22
LY6K
RAB13
RPS27
RARS1
HPCAL1
TBL1X
ALG10B
NDUFAF1
PDCD6
H3C3
H2BC3
FCGR3A
MRPL21
IGHMBP2
RPS20
DDIT4
ZNF207
C17orf75
SH2B3
JRK
PTPN6
C12orf57
MRPL16
KBTBD6
UBQLN4
LAMTOR2
RANBP2
GTF3C3
C2orf66
KMT2C
H2BC15
H2AC15
TACO1
TMEM222
FRG1
SAMD4B
GMFG
TNFAIP8L2
TCEA2
SCNM1
LYSMD1
TMOD4
POLD1
NR1H2
CDC73
U2SURP
SDHAF3
DEFB132
NOC4L
DDX51
FAM227B
DTWD1
ZNFX1
KNL1
DUSP7
CALHM2
CALHM1
PRR5L
COMMD9
TDRD9
ATP5MPL
SRSF4
STX1A
CALCOCO1
FAM98B
CCDC59
TEX46
KDM1A
GNAI2
COMMD2
MED23
ENPP3
TAGLN2
LARS2
KIF2C
BHLHE40
PMS2
AIMP2
WSB2
MKRN2OS
MKRN2
SSBP2
SEC13
ZER1
NDUFC2-KCTD14
NDUFC2
KYAT1
GTPBP6
CCDC90B
SLC44A1
GAPDH
SLC35E2B
SPRY4
BCAR1
KLHL12
TMEM262
NSFL1C
NOTCH2NLC
NUP107
COX5A
TRIM65
MRPL38
TSSK6
NDUFA13
EXTL1
MAPK1IP1L
METTL9
ZBTB37
TAMM41
CLUAP1
C16orf90
TMED2
NDUFA12
USP3
NOTCH2NLB
NKIRAS1
RPL15
RUVBL1
CDKN2AIPNL
TSPAN10
NPLOC4
SLC25A32
DCAF13
NCBP3
SOCS5
PDP2
CDK2AP1
MRPL58
TSC2
NTHL1
TVP23B
MTIF2
HEXIM1
ELAVL3
DDX1
AP5S1
ANP32E
KRR1
PRKCE
DCAF10
MED18
IQCH
AAGAB
USP4
IL37
RPS3
PEX14
DFFA
RPS5
WDR24
STUB1
JMJD8
UBOX5
FASTKD5
DNAJC24
DCDC1
ITPKC
COQ8B
GALK2
COPS2
SLC25A51
AGK
KANSL3
FER1L5
YWHAZ
SNRPE
SNRPB
TTC1
HEATR1
NT5C
PPRC1
NMNAT1
LZIC
INTS1
ARL14EP
PHLDA1
KDM8
PEMT
CIAO3
UNC45B
NLE1
H3C4
H2AC7
H4C5
H2BC7
SOAT2
IGFBP6
ADPRHL1
ZNF212
PCID2
CUL4A
ID1
SACM1L
NFE2L2
SEC16B
RPS28
NDUFA7
PSMD11
WASHC4
POMP
STARD4
SLC20A1
WNK4
VPS25
ACTN1
UQCC1
PARD6B
RPS6KA1
CLCA2
PTEN
KLLN
MOGS
MRPL53
MAT2A
ITFG2
PUS7
INTS5
GANAB
RINT1
H4C4
METTL15
KIF18A
TTPAL
H2BC6
VPS4A
DRD4
USP30
DPY19L4
ZWILCH
SNAPC5
RPL4
EPHB4
SYT5
H3C8
H2BC10
CCDC88A
CALM2
AAR2
R3HDM2
INHBC
PSMD9
HPD
MRPL1
H2BC8
H2AC8
NUP153
H4C2
H3C2
H2AC4
H4C1
MBTPS2
H3C1
H1-1
BCL3
SNAI1
ZSCAN22
PANK4
HES5
TOR1AIP2
TOR1AIP1
YARS1
S100PBP
MRPL19
ASB6
LONP2
ABCC11
CCDC15
EIF3E
MICALL1
ANXA1
CALR
ST3GAL2
RAD23A
ZNF789
ATP5MF-PTCD1
ATP5MF
UBL7
AP5Z1
NSA2
GFM2
RHBDL1
RHOT2
NID1
ANGPTL4
POLR2J3
SSNA1
ANAPC2
ADNP
TTC4
DDX59
PRKCSH
CCDC151
VTA1
NMBR
NREP
ZBTB40
PLEKHB1
TMEM242
ZC3HC1
UBA2
COIL
ARL2BP
PDE8A
DNMT3A
WASHC2A
ZCCHC4
CCAR2
C8orf58
FBXO46
MEIOSIN
BUD13
H4C9
CREBL2
H2BC11
H2AC11
ZNF696
WIZ
RMDN2
H2BC12
H2AC12
PYGB
EEF2K
CALM1
TRMU
FBXW2
ALDOA
ANXA2R
ELAVL2
ANKRD63
SPRY2
EPHA3
HDGF
ATXN2L
BANP
LMNB2
MRPL40
HIRA
TTI2
H4C3
H1-6
MYBL2
VPS33A
LZTR1
ZNF594
CCDC174
ELK4
GORAB
SLC25A13
PRKAG2
GARS1
NCOA3
SNRPB2
ARID2
BSPRY
CAPRIN1
SULT6B1
CEBPZOS
SLC25A45
FRMD8
TMEM199
SEBOX
POLDIP2
PARK7
SLC35E1
PRRG2
NOSIP
TRMO
CHD1L
GOSR1
OGT
SCRN2
ZNF3
COPS6
PRKAB2
MRPL10
LRRC46
OSBPL7
DPH7
NRF1
H2BC17
H2AC17
PPIP5K2
GIN1
H3C12
MACROH2A1
ROM1
EML3
B3GAT3
GSN
H3-2
PSPC1
TRMT61B
STAT1
RPL27
IFI35
G6PC3
LSM12
BBS1
GOT2
CRTC1
B3GNT7
PA2G4
ATR
TRPC4AP
SLC35E2A
FAM193B
H4C8
AP3B1
TRIM62
SIRPD
TIMM22
WBP1
INO80B
SMG7
RPL10
NECAP2
CATSPERG
GPRC5A
COL16A1
MTMR2
PHAX
ALDH7A1
ECSIT
CNN1
ZMPSTE24
LDAH
SLC39A13
KIF15
KIAA1143
NUP188
DOLK
E2F6
DRAP1
C11orf68
CSNK1G3
TCHP
ASB2
TEFM
PARP2
TSNAX
CCNB1IP1
CCDC125
BST1
UCHL5
RO60
ZSCAN25
TMEM101
KLHL20
RNF168
ZNF581
ZNF580
CDK12
ZNF106
SNAP23
POU2F1
DHRS3
WWTR1
MED1
MPG
RHBDF1
LRRC52
PAFAH2
MRPL24
ZNF26
AP2B1
MRPS31
PEX12
EXOSC8
ALG5
ZNF770
TRIP6
SRRT
MFAP3
FAM114A2
ERLEC1
ASB3
LEKR1
CSRP1
IFNAR1
DISC1
ITGA3
TMC1
CALR3
C19orf44
NOTCH2NLA
TMEM79
SMG5
CASC3
TAS1R1
NOL9
SH2B1
TUFM
PDE12
BFSP1
PRRT3
CT45A9
CT45A8
CT45A2
MRPS15
EPRS1
POLR3E
VPS72
PIP5K1A
LHX9
C1orf53
EHMT1
KEAP1
ARRDC1
PRCC
ZC3H10
RPL41
COG2
ESYT1
FAM149B1
ECD
PPP6C
SEC22B
PECAM1
AGMO
SART1
LRRC59
AP1G1
USE1
NFKB2
TSG101
CENPBD1
BCAT2
ZNF185
RRP9
PARP3
EIF3H
LIMA1
PSRC1
AMOTL1
TUBB1
ZNF721
PIGG
GID4
ATPAF2
USP48
RPS3A
NME6
TM9SF1
IPO4
LRWD1
ALKBH4
RNF10
COQ5
MRPS14
STK10
AXL
TNFSF14
PCBP2
TPT1
SRSF7
FBXO38
SAMD10
PRPF6
PMF1-BGLAP
PMF1
MUL1
NAGK
CNOT2
ZNF668
ZNF646
BCAS4
KRT18
TESK1
SPATC1
DDX23
CHMP4B
RPL29
COX7C
AQR
NOC3L
DR1
AVPI1
CCDC85B
FOSL1
ABCC3
NDUFS7
FANCD2
H2BC4
H2AC6
LENG8
URM1
TPCN1
AMACR
IQCD
PPID
NANOS3
PRDM5
COMMD1
TEKT2
ADPRS
IPPK
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
DDX46
TOB1
ZNF358
MCOLN1
ATP6V0D1
AGRP
SASS6
RUSF1
HNRNPU
SMIM14
VPS37B
LRATD2
DUSP6
FOXO3B
TFB1M
ILVBL
NPR1
ILF2
ITGB3
ZP4
SCRIB
PRDX1
STIP1
TTC32
PGLS
OCEL1
DPY30
EFNA3
HTR5A
ARTN
NOTCH2
GPAM
CCDC124
GPS2
EIF5A
BRMS1
RIN1
B4GAT1
TSR3
GNPTG
CBX5
HNRNPA1
DYNLRB1
SPRED2
H3C10
H2BC13
H2AC13
FRMD3
PAQR5
ISLR
KRT31
COQ9
CIAPIN1
TOP3B
NOL11
ARL8B
PPP4R3A
TRMT6
MCM8
CARD9
SEC14L1
GPSM1
MRPS24
WDR13
RFFL
MAST2
IL24
SMIM38
C1QTNF3
TOMM22
STYXL1
ING4
LDHA
SEC11A
THOC5
TMEM250
VPS28
RPL7
RDH10
FGFBP3
ATRN
NFIB
CLDN20
CDKN2C
FAF1
S100A13
S100A1
CHTOP
TMEM126A
COPS4
HSPA8
PRR19
PAFAH1B3
ZNF697
PPP2R2C
GPR19
FBN3
TMPRSS5
ZGPAT
ARFRP1
PIGU
TFRC
RAD52
MAMDC2
MAML3
ACP6
CWF19L1
CSRNP1
FHL2
TNFRSF6B
TIGD6
HMGXB3
STOML2
PIGO
RPTOR
FAM214B
PNPLA6
MPHOSPH10
MCEE
USHBP1
BABAM1
AAAS
ARID3B
FEM1B
SCO1
ADPRM
TEX261
STT3B
TOMM7
TRIM46
KRTCAP2
ZNF513
SNX17
EIF2B4
RPS6KB2
PTPRCAP
EEF1A1
HSPA9
CASP8AP2
ZNF350
MDN1
C16orf72
DMTF1
CSDE1
DBR1
KXD1
FAM20B
TNFRSF10B
CYP2E1
DSN1
OTOA
ARHGEF12
FAM228B
BMS1
TP53I3
SF3B6
ARHGEF7
LMNA
SRSF10
NUCKS1
PKIG
YJU2
TRMT10C
GATAD2B
PLEKHH3
MSANTD2
TRNAU1AP
CSTF1
AURKA
NCOA7
ALG14
SERINC3
RASA3
TUBG2
NPDC1
ENTPD2
SMN2
SMN1
WASHC2C
DNAJB12
ZNF148
NDUFAB1
MRPL4
ZBTB11
RPL24
ZNF410
HIPK1
ADGRG1
PARN
BFAR
ANKRD13D
MNAT1
INAVA
C11orf49
NEURL3
COPS7A
TDG
C12orf73
RBM28
RAD9A
ICE2
SURF2
SURF1
RPL7A
MED22
CLUH
VPS35L
TMEM223
TMEM179B
AGL
CA5A
ADORA2B
CCN5
CRTAM
SMIM12
CEP350
FAM187A
EFTUD2
CCDC103
FAM168A
PLK2
RFC2
MRFAP1
CYB561
ISG20
MRPS21
LRRC49