ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX535453 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◣ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

PHC2
EAPP
EXD1
CHP1
LIMK1
SEMA6A
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
DPY19L4
STX16
FAM98B
KIF5C
STX18
DUX4
DDIT4
MTRNR2L2
MSH3
DHFR
IST1
MRPL21
IGHMBP2
H4C12
H4C11
H2BC15
H2AC15
H2BC14
H2AC14
SAR1B
GSTA4
NUF2
GBA
AAR2
FRA10AC1
TAF12
TUBGCP3
NR1H3
ACP2
ZNF207
C17orf75
SMARCD2
H3C13
H2BC18
SLC44A1
NME1-NME2
NME1
UCHL5
RO60
SF3A3
FEM1B
DMAP1
MTRNR2L1
H3C4
H2AC7
H4C5
H2BC7
TPRKB
RAD54L2
WDR74
STX5
GALK2
COPS2
RCAN1
CCDC200
TRPV2
JRK
GTF3C3
C2orf66
SLC20A1
PHLDA1
RRP15
RASSF5
H1-2
H3C3
H2BC3
RBBP5
SNAP47
JMJD4
MTRNR2L8
RARS1
EIF1AD
CST6
BANF1
NPAS4
TMEM107
DSTYK
TBC1D19
VWA8
DCAF10
RPL37
CARD6
ATR
NAA80
IFRD2
HYAL3
H2BC5
H1-4
AP3S2
IER3
FLOT1
TATDN3
NSL1
EIF2D
H4C4
H2BC6
S100A14
S100A16
TOP3B
MRPL16
CDKN2AIPNL
NDUFB7
SELENOH
ACOT7
RPS7
RPTOR
STX3
BSPRY
USP30
CDK5RAP1
RAB5IF
MAN2C1
KMT2C
TRIB3
NDUFAF1
TSEN15
DHRS3
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
NDUFA12
TRIP4
PCLAF
OGT
HPCAL1
BFSP1
DCP1A
ZSCAN30
FCGR2A
NTSR1
H2BC21
H2AC21
H2AC20
PCID2
CUL4A
TDG
C12orf73
SIRT4
CSRNP1
GTF2H2C_2
GTF2H2C
SPOP
KLHL20
DRG2
YWHAE
STAT3
EIF1
RPS6
SPRY4
SNRPB2
E2F6
SSBP1
CLUAP1
C16orf90
LAMP1
COMMD2
S100A2
VIRMA
TACO1
TEFM
YARS1
S100PBP
UCKL1
WDR36
HEXA
BNIP1
C11orf49
ZNF212
METTL9
IRS2
GSTP1
SLC24A1
INTS14
TRIAP1
COX6A1
PEX3
ADAT2
SLC27A1
MTF2
LRRC47
MANBAL
FAM180B
NDUFS3
KBTBD4
ZNFX1
PARP16
JUNB
WNK4
VPS25
AP3B1
WDR24
STUB1
JMJD8
HMGB1
USPL1
EEF1A1
VANGL2
ST3GAL2
PLEKHM3
TMA16
LARS2
KANSL3
FER1L5
TEKT2
ADPRS
DPY19L3
PROB1
SPATA24
ADNP
H4C2
H3C2
H2AC4
WWP2
RTN4
MRPL44
INTS12
GSTCD
COL23A1
PYGB
IFI16
PYDC5
SPATA25
NEURL2
CTSA
ZSWIM1
ALG10B
P2RY11
TMEM101
EIF3G
STAT6
ADPRHL1
FBXW2
TM9SF1
IPO4
UNG
ALKBH2
GTF2H2
GPRC5A
GAB2
PDE6A
CCNL1
PSMF1
RPL32
TMEM256
NLGN2
DMXL1
CHD2
MRPS23
KIF2C
TSPYL5
CD22
AP5S1
NECAP2
CRTC1
SNX17
ZNF513
EIF2B4
ZCCHC24
ADAMTS9
DNAJC25-GNG10
DNAJC25
TOR1AIP2
TOR1AIP1
CD109
DDX1
DNAJC24
DCDC1
S1PR2
TVP23B
DPP9
NOC4L
DDX51
MRPL3
SNRPB
KIAA0895L
EXOC3L1
E2F4
ARIH1
ELMO3
CCND1
SNAI1
TMEM262
PMPCA
ENTR1
TTPAL
VWA5A
IL24
DDX23
NDUFS7
TMEM242
SLC3A2
DMAC1
ACBD6
CTSC
ZNF391
AGMO
RPS2
RNF151
TBL3
NOXO1
PAFAH2
NFXL1
GGNBP2
H4C6
H1-3
H3C6
WDR11
RTF2
H4C7
H3C7
HTR5A
ARHGEF12
ALG10
RPS5
SLC50A1
NDUFC2-KCTD14
NDUFC2
SSBP2
SREK1IP1
CWC27
EFNA1
RBM28
RAB18
B3GNT7
AURKAIP1
STMN3
RTEL1
TPR
ODR4
NCBP3
ATF3
ANKRD18B
CASC3
PRRC2B
DUSP7
ZC3H6
RCOR3
RPS8
TRUB2
COQ4
POGZ
TUBB1
NOTCH2NLC
NDUFB10
RPL3L
PUS7
RINT1
DPH7
INO80C
SDC4
ITGA3
ZNF827
KBTBD6
INTS5
GANAB
RPL26
KRBA2
TRIB1
GMEB2
SERPINA3
INTS1
CCNC
SIT1
DIAPH1
TEX46
KDM1A
CCDC107
ARHGEF39
DRAP1
C11orf68
COX16
IQSEC3
IL21R
CHD1L
PRKAB2
ZNF830
CCT6B
RACK1
RAB7B
KCNMA1
LRRC37A3
PIP5KL1
DPM2
SRFBP1
TESK1
ZBTB45
SLC27A5
MTAP
DPP8
SLC33A1
EDC4
SH3GL1
CHAF1A
ODC1
RAP1GAP
ZMPSTE24
ZSCAN25
DUS1L
MTERF1
FZD1
MNAT1
PRKCE
AVEN
CPLX2
RRN3
CDC73
THAP5
DNAJB9
GRAP2
UCN2
PFKFB4
CHI3L2
H2AX
DPAGT1
HMBS
STAT1
MUS81
CFL1
SLC25A51
RBM45
PDE11A
SCARF1
RILP
COG2
FAM227B
DTWD1
RGPD1
RGPD2
UQCC1
UFSP1
ACHE
MED23
ENPP3
TTC4
BAGE4
BAGE3
BAGE
SEC16B
GTF2I
RFXANK
BORCS8
C10orf88
DUS2
DPEP2NB
DDX28
GOSR1
DHX8
ANP32E
TAF1C
ADAD2
KNL1
MRPL58
PRADC1
CCT7
ZSCAN10
ZNF205
H2BC8
H2AC8
PRRG2
NOSIP
PSMD6
OTUD7B
CSNK1D
ATXN2
RCC1
H3C10
H2BC13
H2AC13
KMT2D
RHEBL1
ZNF789
ATP5MF-PTCD1
ATP5MF
TTC33
WNK1
TRPC4AP
NOB1
ITGB3BP
EFCAB7
RPL11
METTL15
KIF18A
RNF10
COQ5
WWTR1
LOC283710
NOC3L
CFAP298-TCP10L
CFAP298
SUPT5H
RPS16
FAM133B
TRIM65
MRPL38
H4C3
H1-6
SRA1
SLC35A4
APBB3
EIF4EBP3
BHLHE40
WWOX
BRD2
MACC1
BCL9
FAM90A1
HEXIM2
ORMDL3
GSDMB
CCDC86
POLDIP3
TIGD1
EIF4E2
CPPED1
H1-0
GCAT
REX1BD
TEX9
SH2B3
RFX7
ETV1
TMEM167B
TMEM190
TMEM238
RPL28
NREP
RPS6KA1
NFATC2
SOX10
BANP
BOD1L1
NCOA3
SRSF6
PPP4R3B
MTA2
TUT1
VMO1
PSMB6
GLTPD2
RCC1L
ZNF106
SNAP23
ZNF253
LGI4
FXYD7
FXYD1
PTPN6
C12orf57
ZER1
RAB13
RPS27
SLC35A3
ANKRD40
ZBTB37
MTHFS
ILVBL
FXYD3
PTPRH
RUVBL1
VPS72
PIP5K1A
ZC3HC1
BICD1
NSUN4
ATF6
C3orf49
CALR3
C19orf44
NEK8
RPL23A
RAB34
TLCD1
PROCA1
MRPS14
INPP5F
SNTB1
EIF4A2
NBPF1
RFX3
TTI2
HNRNPA1L2
MRM3
GLOD4
ZSCAN22
ZC3H10
RPL41
ZNF554
TP53BP2
SLC23A3
NHEJ1
TNFSF14
SPIN2B
EXTL1
TMEM40
POLR2J
LSM8
LRRC37B
PLD4
TFAP2B
TRIM60
RPL29
MRPL39
WASHC5
NSMCE2
RPS3A
SCAMP3
FAM189B
RPS14
DDX19B
AARS1
SLC36A1
CERS2
ANXA9
C7orf61
NMNAT1
LZIC
B4GALNT3
FUS
RPL13
SNRPE
LMNA
CFAP20DC
CT45A3
LDAH
SLC26A2
EXD2
RNF216
HOOK2
USP2
NEK6
NPRL2
TMEM115
CYB561D2
CCDC88A
RPS11
RPL13A
ZNF358
MCOLN1
SNX19
UTP3
ANAPC5
C16orf72
BCL3
ARID1A
AP4E1
SYT5
RPL7
RDH10
ZNF708
GPR176
EPHA3
CFAP45
ZNF56
SDHAF3
VPS45
MYBPC3
PCOLCE
MOSPD3
ABHD12
AK3
SEC13
UNKL
C16orf91
PKM
TAF5
TRA2B
NUPR2
CHCHD2
MFF
CAAP1
SCNN1A
LTBR
NAA20
BBS1
SEC22B
EMC3
CARD17
PDE6D
COPS7B
CBWD2
NBN
MBTPS2
PARP4
KCTD3
TENT4A
VIM
TRAF1
ZCCHC4
SART1
LIG4
ABHD13
TPK1
YJU2
THOC5
NDRG1
CYP2E1
TBL1X
CCN5
TARBP2
MAP3K12
RBM14-RBM4
RBM14
PKIG
TAF13
DCUN1D5
PBK
H3C8
H2BC10
SERINC3
CDH19
CWC25
MRPL48
LRRC59
HNRNPH1
MKRN1
LRP6
NOTCH2NLB
C8orf33
WBP1
INO80B
AARS2
LSM5
AVL9
NFE2L2
ZNF791
ZNF490
RAF1
ITPKC
COQ8B
ACTBL2
FAM228B
TP53I3
SF3B6
ELOB
LDHA
PRSS33
NDUFAF5
ESF1
OSBPL11
PPP1R1B
CARD9
CEP120
NACA
GPSM1
EPHB4
TRIM46
KRTCAP2
GLIPR1L1
CAPS2
LYPLAL1
PLEKHG5
POLG
FANCD2
POLR3B
FRG1
LAMTOR5
RMDN2
PCOTH
MIPEP
C1QTNF9B
ABR
UNK
H3-3B
POLR2J3
MTR
UQCC3
LBHD1
TCTE3
ERMARD
RANBP6
KIAA2026
ZNF564
MARCHF7
SURF2
SURF1
RPL7A
MED22
CSKMT
C11orf98
COIL
HOXB3
HOXB4
HOXB5
STEAP1B
ALLC
NOTCH2
SEC61A1
VPS33A
CDC16
DEF8
RFFL
ANKH
IDH3B
POLG2
DDX5
HPS6
ARMH3
NAXE
GPATCH4
PHLDA3
MEOX2
DNM1L
REXO4
ADAMTS13
FAM187A
EFTUD2
CCDC103
GTF2IRD2B
ID1
MRPL40
HIRA
H4C9
TOMM20
SMG8
ZNF45
H2BC12
H2AC12
CRB1
INTS2
RASA3
SLC25A21
APH1B
LTBP1
GFAP
BCL2A1
NT5DC4
USP4
CYB5R4
TMEM88B
VWA1
MAPRE2
EML2
MBNL2
ART4
PARP2
NSA2
GFM2
TUBA1C
STMP1
CCNB1IP1
ZBTB40
LONP2
ABCC11
RBM17
YBX3
ZNF443
RNF213
SURF6
PSMB4
FBXO38
H2BC11
H2AC11
CBX5
HNRNPA1
TTC26
STN1
KDSR
ERMP1
NANOS3
H3-2
LOXL4
COL16A1
BOD1
DNM2
RPL5
LTA4H
PNPO
CALM2
SRSF5
ZNF76
WIZ
TOMM34
STK4
GNPAT
C1orf131
ZNF581
ZNF580
LUC7L3
CHD1
ALDH9A1
ATP5F1E
ELAVL3
PLPP4
SCGB1C2
KDM6B
ATAD2B
PCGF2
SPRY2
SH3TC2
NHLH1
CT45A9
CT45A8
CT45A2
ZNF337
SPRED1
FBXL18
TAF3
SAMD10
PRPF6
TIMMDC1
TMEM170A
IPP
GOLGA4
IL6R
MAGEA2B
MAGEA2
CSAG3
XKR7
FAM78B
DCAF8
UBXN1
RPS21
EFCAB2
HEMK1
C3orf18
TAGLN2
KMT2E
MMAA
PLEKHH3
H4C8
EPB41
ZNF561
TMCC2
TUBG2
ZNF609
PLA2G4C
MYPN
CLTC
COMMD1
CCT4
TRMU
MCL1
SACM1L
RPL37A
GRPEL2
MLEC
DHX9
PEX2
COA1
PARD6B
FCRLB
CTNNB1
TMEM41A
SNRPD1
H4C1
RNF6
MANSC1
BORCS5
H3C1
H1-1
LARP1
SPRED2
TJP2
IFT46
ARCN1
MPG
RHBDF1
DUSP4
PRNP
GIP
HIKESHI
RBSN
RPL35
ARPC5L
WDR38
KIAA0895
G6PC3
LSM12
DCLRE1B
AP4B1
CAPRIN2
IQSEC1
ARGLU1
APP
ABCA1
FRG2C
WASHC2C
CLDN6
TNFRSF12A
THOC6
HCFC1R1
CCDC90B
CEP164
CLDN9
PPP2CB
GFOD2
PTPN13