ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10131662 | Bronchial tracheal epithelial cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◣ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

INO80D
MTRNR2L8
ZFX
GBA
KMT5B
FBXW4
SNX16
MT2A
SERPINE1
DUX4
DDX17
COL23A1
MCL1
HNRNPR
PMF1-BGLAP
PMF1
ANP32B
DUSP1
TXNDC15
HNRNPA3
RBL1
ASB1
NAA38
CHD3
TBL1XR1
HNRNPUL1
HEXIM2
MTA3
GTF2I
DEK
TRIB3
DDIT4
GABPB2
CSNK1E
XBP1
FAIM
KIF5C
ZC3H4
SEPHS1
QSER1
EIF4G1
PUM2
TMED9
B4GALT7
BAZ1B
ANP32A
ZNF532
SNRPB
SCMH1
RIN3
IER3
FLOT1
NIPAL2
RAD50
SSRP1
P2RX3
NAA25
EIF2D
ZC3H11A
ZBED6
ATF1
PPIA
ACVR2B
RAN
MTRNR2L2
MSH3
DHFR
GPS2
EIF5A
PRRC2A
AIF1
RNASEH2B
FABP6
SF3B3
COG4
ZNF783
CHD1
NSD1
ZNF282
DPY19L4
KMT2A
HNRNPF
ASXL1
DUS1L
BRWD1
TET3
KDM3B
ZMYND11
PRTFDC1
FAM169A
PRCC
HSPA8
FBXO4
ACTB
KEAP1
RNF220
SQSTM1
UNC50
COA5
NFKBIA
HMGB1
ZNF407
ZNF207
C17orf75
TRIM52
PCBP1
TCERG1
UBE2L3
ADNP
EZH2
WDR76
MFAP1
YARS1
S100PBP
ELOB
PRSS33
ZNF22
CALR
RAD23A
MTRNR2L1
SCAF8
NFYC
TGFBRAP1
C2orf49
USP24
HINT1
KRT17
SSBP2
BEND3
KPNB1
HNRNPA2B1
CBX3
ARPP19
CASC3
RPTOR
RCOR3
PRDX2
JUNB
ERAP1
ZSCAN12
MACROH2A1
GTF2IRD2B
ACBD6
TMEM268
BOD1
RPL12
LRSAM1
TUBGCP3
GSTO1
TAF4
EEF2
PRDM15
SFT2D3
DPYSL2
STAT6
RGPD1
RGPD2
SEPTIN8
RAD54L2
NFKBIL1
DDX39B
ATP6V1G2
DYNC2I1
ZFR
C4orf36
SENP6
ZFP62
VPS54
COMT
TXNRD2
PPP2R2A
PRDM5
SLC9B2
ZNF280D
POGZ
HDGF
MRPL24
FAM228B
PFN4
PHIP
RPS5
RNF225
NSMAF
UNK
H3-3B
PDXDC1
ANKRD40
SFXN1
PRRC2B
EPC1
PTPRN2
TBX1
FBXL17
RPS23
ATP6AP1L
MARCHF7
AZIN1
SMARCE1
ZBTB38
MAMDC2
LNPEP
RANGAP1
HECTD1
ZC3H7B
SPAG6
CXCL2
SREK1
STAG1
DERA
HMGA2
RPLP0
GCN1
MCMBP
KAT6A
HDDC2
VDAC1
HDGFL3
KIAA0895L
EXOC3L1
E2F4
NRF1
ELMO3
TLK2
ZNF444
CKAP2
VPS36
ACSF3
SLC38A2
BFSP1
PTBP1
SRSF6
ULK2
EIF3A
PAIP1
NAE1
KIAA1614
RPL5
TBC1D9B
GMEB2
HMGA1
LRRK1
FRA10AC1
ZBTB7A
MTMR2
SLC30A5
PPRC1
HNRNPAB
MAN2C1
ZCCHC3
C20orf96
PHF3
MANSC4
KLHL42
TRMU
MRPL28
CUL1
ARSB
MDM4
LEMD2
PFKM
SENP1
INO80
XPC
LSM3
UQCRH
LRRC41
CEBPG
INTS2
ZNF274
RPL11
CSNK1D
MTF2
RPL37A
TFAP4
COMMD10
DENND6B
SRSF10
ZC3H6
GEMIN7
ZNF296
ZC3HC1
TRNT1
SELENOT
SPIN1
TRA2B
DYNLL1
SRSF9
KIAA1191
ARL10
ERBIN
KLHDC8B
CCDC71
POGLUT3
MAP3K20
MCM3
ACYP2
CCDC85B
FOSL1
AVEN
ELAC1
NFKB1
CEBPB
GJC1
RAD23B
GMEB1
CYB561
CNIH1
H4C12
BRIX1
H4C11
H2BC14
H2AC14
CERS2
ANXA9
CXCL3
TAF12
TSEN15
CEBPD
MANF
RBM15B
EEF1A1
DDX50
HSPA9
MFSD14A
UIMC1
ATG10
TLK1
PDS5B
RNF145
NUP153
DPH2
B4GALT2
ATP6V0B
RPL35
ARPC5L
WDR38
ZNF710
DYRK1A
SRSF1
ZNF518A
MRPS2
C9orf116
TPM4
STK24
GPX7
MZT2A
PHF2
RNF214
PCSK7
RFX8
BTF3
MSRB2
ATF4
SAR1B
WDR24
STUB1
JMJD8
LAMC2
PPIF
CASD1
PIEZO1
ARAP3
ATXN10
G0S2
STX18
REPIN1
KDM2A
ZNF236
MGAT4B
TTC38
PKDREJ
EIF3B
BCAR3
GTF3C6
ZMYM4
C19orf12
ARPIN-AP3S2
ARPIN
RPS2
RNF151
TBL3
NDUFB10
RPL3L
TMEM42
MSL1
EIF3E
MIER3
RPS8
SDHAF2
CPSF7
RHOB
SMAD5
PRDM2
CCNT2
UBAP2L
C1orf43
TCHP
SORBS3
UBE2E3
PPP4R3A
TNPO1
TEDDM1
GLUL
OCIAD1
PAFAH1B2
SMARCD2
NDFIP1
NNT
ZNF618
RNPS1
RRM1
HDLBP
SEPTIN2
PPIP5K2
GIN1
TGFB1I1
STX16
CDT1
PDIA6
BRF1
APRT
N4BP2
BTBD6
MPDZ
NKIRAS1
RPL15
NUFIP2
YBX3
GAL3ST4
ZNF441
SHROOM1
CDC42EP1
GSAP
STAG3
GPC2
KCTD15
FOXE3
TRMT2A
RANBP1
HNRNPU
OGFOD2
ARL6IP4
SRCAP
LOC730183
ING4
KANSL1
MPPE1
EEF1AKMT1
E2F1
KDM5C
DOT1L
RPS4X
SYDE1
ZNF354B
CHAMP1
ZFAND6
PBLD
HNRNPH3
GABPB1
RPSA
SRRM2
SNAPC1
NPEPL1
SLC24A1
INTS14
TIPARP
DNMT1
SHISA5
ATXN7L3B
TREX1
TYMSOS
TYMS
NDRG2
ARHGEF40
NME1-NME2
NME1
CAPN15
YBEY
MCM3AP
RPS14
HENMT1
CCNE1
MGAT1
IMPACT
RIF1
NFAT5
VAPA
RMI1
HNRNPK
MRPL1
DNPH1
BEGAIN
RCN1
WSB2
EDF1
DDX19B
AARS1
TEX22
GCFC2
STC2
CHRM4
MDK
TOB1
RBM14-RBM4
RBM14
MARCHF6
NFKBIZ
SREK1IP1
CWC27
NUDC
NR0B2
GATAD2B
IRF2
ARIH2
SCCPDH
SETD2
NHLRC2
DCLRE1A
TMEM17
TMCC1
MACROH2A2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PLEKHM3
RPL10A
RDH14
C5orf24
EGLN2
SDC1
GTF3C3
C2orf66
FBXO38
CANX
NFE2L2
RMI2
ITGA3
AFAP1
PXN
ALKBH3
ARHGEF7
RPS15
RPL37
CARD6
ZNF768
ZNF747
TMEM68
TGS1
TPRA1
MCM2
BPTF
PRKAA1
IFNGR2
DUSP16
RPS7
ZWILCH
SNAPC5
RPL4
ATE1
STS
PUDP
TSC1
GFI1B
TDRD3
CRADD
HMGN1
UBC
RPLP1
PDCD7
YWHAE
EBAG9
NCOA7
DCTD
GOLM1
TMEM98
ACOT2
KMT2D
RHEBL1
MRPL40
HIRA
CNBP
KRCC1
BIRC3
SCAND1
CDC42
ARRDC3
GGACT
SMC1B
RIBC2
ZBTB42
AKT1
POLG
RNF169
ZNF770
CTPS1
ZNF497
A1BG
GPD2
SMYD2
TRAF3
CD68
H2BC15
H2AC15
EIF4A1
LOC100996842
MPDU1
ENOSF1
ECPAS
YTHDF2
AGPAT3
ZYX
FAM131B
EP300
PHGDH
SLC7A1
RAD52
PTMA
LARP1
BACH1
TFDP1
EIF4G3
CHST3
DCAF10
RPS19
KMT2B
RPS6KC1
URGCP
DCUN1D1
URGCP-MRPS24
IFIT5
CKS2
SECISBP2
ZER1
VAMP2
ANXA2
TMEM168
KLHL9
INTS9
HMBOX1
ATXN7L2
CYB561D1
EIF4E
RUSF1
SLC39A9
ERH
SMC3
SMIM15
TASOR
ODF3L2
MADCAM1
PCNP
MTHFD2
PGGT1B
RACK1
AXL
ODC1
CCDC102A
ADGRG5
FAM160B1
SMAD1
TNKS
SDF4
B3GALT6
LEKR1
ZBTB40
AKAP10
SCLY
UBA2
UQCRFS1
FOXRED2
TEDC2
PTPN9
TBC1D24
NTN3
NOXO1
PTPN6
C12orf57
SLC3A2
ATN1
WTIP
BRPF3
DDX6
GFER
SYNGR3
RAC1
AMPD3
SIK1B
SIK1
MRPL3
ZBTB4
SLC35G6
POLR2A
ZNF398
ZNF425
ZNF32
PSMG2
PSMD14
MAML1
HNRNPDL
ENOPH1
DICER1
ITPRIP
ZBED5
MPG
RHBDF1
MCIDAS
CCNO
TBKBP1
ZBTB8A
KREMEN1
SPIRE1
DNAJA4
C22orf31
FAM207A
GAPDH
VWA8
ZNF341
TARS1
RDX
MLLT10
SKIDA1
ZC3HAV1L
ELOVL6
MCM7
AP4M1
TOP2B
UBOX5
FASTKD5
CTCF
TMX4
ZNF496
TCF7L2
ARHGAP21
KHDC1
NFIC
ACOT1
NAGPA
ZNF839
NRL
EIF4B
ARIH1
PCK2
UBE2J1
CKLF-CMTM1
CKLF
TK2
SAMD14
KRT7
MAD2L1BP
GTPBP2
DDX1
TEKT2
ADPRS
XPOT
SMIM12
DDX46
VPS52
RPS18
B3GALT4
HERC3
PYURF
PIGY
MAGOHB
DYNC2I2
RHBDD3
EWSR1
TRIM44
GTF2IRD2
TAF1D
C11orf54
ATIC
LSM14A
MRPL52
MMP14
PPP3CC
CPLANE1
FOXK1
AGO2
STRN4
FKRP
FBLN7
ZMPSTE24
TMCO2
MYH9
CTBP2
PTHLH
BCL9L
ZBTB47
MKNK2
ZNF143
ITGB1
PABPN1
CDC7
TCF25
RAD21
LRRC37A3
C2orf42
ITGB3BP
EFCAB7
GABPA
ATP5PF
HNRNPD
MIDEAS
WDR82
GLYCTK
XRCC5
HNRNPA0
OTUD4
POLD2
HLTF
SNX25
CFAP97
COMMD1
CCT4
SNRPD1
GTPBP6
GDI2
SNX5
MGME1
RPL23
ZNF623
NACA
SLC20A1
ZDHHC6
VTI1A
EXOSC9
NSD2
CUEDC1
PAFAH1B1
MARK2
SMIM10L1
PRH1-TAS2R14
NGRN
CHEK1
RXRA
CNOT3
NFYB
TIRAP
PATL1
ZNF629
POLR2J3
SMN2
SMN1
LATS1
FKBP5
AFF4
ZC3H7A
RNF135
UCK2
SPIDR
FOXD1
PPP4R1
FBLIM1
KATNBL1
CDC16
ZC3H12C
SOCS6
STAU1
SFSWAP
ATXN2
U2SURP
LIG3
RAP1GDS1
COLGALT1
MTA1
SLC22A15
PITX1
PYGO1
NOTCH2
TCF12
RWDD1
MATR3
CDKN1A
LHX9
C1orf53
MICOS10-NBL1
MICOS10
SLC7A5
RHOF
FBXL5
SETD1B
BRD2
TENT2
MYO5A
GPR150
SNAI2
GIGYF1
EXOSC6
NOTCH1
SRA1
SLC35A4
APBB3
TFG
DUT
TM9SF3
RCC2
ZFHX3
DIS3L
PARP8
ABR
F3
TMEM88B
SUSD1
ANKRD65
AURKAIP1
PABPC4
TMEM254
ART1
PHC3
COPZ2
NIPSNAP2
CTNNB1
POMZP3
CTF1
BCL7C
BMS1
SNX19
GOLGA3
C14orf93
UBE3C
SP1
FAF2
GADD45GIP1
TRAPPC12
EIPR1
SGK3
RBM26
LITAF
NCOA6
BASP1
AXIN1
GADD45B
HMGN2
R3HCC1
ITGB8
EPM2A
BRD4
HHIPL1
LPGAT1
ZNF316
HOXB6
DNMT3A
HOXB7
HOXB8
EGFR
RPL22
RNF207
LONP1
CATSPERD
PARK7
SDCCAG8
CEP170
POLR2M
OVCA2
TXNL1
INTS5
GANAB
TBCA
NOXA1
ZNF717
TNIP1
ANXA4
MIS18BP1
NAPEPLD
MET
ZFP36L1
CLTC
TMEM199
SEBOX
POLDIP2
FBXW11
ACSL3
ZNF292
TRDMT1
CIPC
TNRC6A
ERCC3
ATXN7
MARVELD1
THOC7
POU6F1
HOXA9
HOXA10
ADCY3
FRG2
MRPS30
ZNF507
ENO1
TIMELESS
MIP
SLC15A4
MTHFD1L
UBE2R2
ZNF121
SIRPA
GTF2H2C_2
NABP1
GTF2H2
PCIF1
KMT2E