ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10131663 | Bronchial tracheal epithelial cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◣ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

INO80D
ZFX
HNRNPR
TCERG1
HEXIM2
MTRNR2L8
FBXW4
ASXL1
MTA3
ZNF783
GTF2IRD2B
KMT5B
DDX17
IER3
FLOT1
RNF220
HNRNPUL1
MT2A
ADNP
NFYC
EIF4G1
HMGB1
EGR1
GTF2I
TRIM52
ZNF280D
SERPINE1
FAM169A
TXNDC15
SNX16
NAE1
ZNF532
NSMAF
SF3B3
COG4
ATF1
ZC3H6
SSRP1
P2RX3
PAIP1
FBXO4
BTF3
COMMD10
PPP2R2A
KDM3B
RPS23
ATP6AP1L
ACTB
DUX4
HNRNPA3
RAD50
TBL1XR1
ZC3H11A
ZBED6
RPL37A
DDIT4
MANF
RBM15B
SRCAP
LOC730183
ZMYND11
ATXN10
ERAP1
SREK1
SCAF8
ZBTB38
SMAD5
ZNF282
LEMD2
PRCC
MLLT11
GABPB2
BRWD1
MRPL28
ZNF444
EIF2D
NEK9
ZNF507
RBM26
R3HDM2
INHBC
DYNC2I1
ACVR2B
DDAH1
CCN1
DARS1
BPTF
NSD1
ZNF22
UBE2L3
PUM2
LHX9
C1orf53
LRRC37A3
PRRC2A
AIF1
EPC1
GPS2
EIF5A
ZFP62
VPS54
SELENOT
STRN4
FKRP
ZNF518A
SDHAF2
CPSF7
RHBDD3
EWSR1
YWHAE
ZNF148
NAA38
CHD3
ELAC1
DEK
RPL13
THBS4
MTX3
PCBP1
FAIM
RANGAP1
ZC3H7B
C4orf36
SOCS6
SNRPB
RMI1
HNRNPK
F3
COMT
TXNRD2
DUS1L
TGFBRAP1
C2orf49
ZNF768
ZNF747
SEPHS1
ASB1
TBCA
ZSCAN12
RDH14
POGZ
TFDP1
EIF4B
ACYP2
ARPP19
RCOR3
KDM5C
RNF214
PCSK7
RPS19
FBXO38
ZC3H4
PPIA
TMEM17
KIF5C
ZNF839
URGCP
URGCP-MRPS24
NNT
RPS5
MDM4
MTRNR2L2
MSH3
DHFR
RNF225
ANKRD40
RNF135
GAPDH
ZMYM4
EIF4G3
CDC27
CSNK1D
SRRM2
KLHDC8B
CCDC71
RIN3
RAN
NIPAL2
ZFP64
MIER3
PAFAH1B2
SRSF6
CHD1
PGGT1B
MARCHF6
TEPSIN
NDUFAF8
TOP2B
ANXA2
DIS3L2
PRDM15
PTPN9
RPS4X
ANP32B
SLC24A1
INTS14
LPGAT1
HNRNPF
SRSF4
SPIN1
SMARCE1
GTF3C6
RNASEH2B
ZNF143
TDRD3
TET3
NCOA6
ZNF746
DUSP16
UNC50
COA5
KCTD18
SUSD1
SLC30A5
IDNK
CALR
RAD23A
RPS14
SOX6
C11orf58
FOXK2
NFKB1
DNAJC11
RPS7
CTPS1
HDDC2
CCDC102A
ADGRG5
STK24
CKS2
SECISBP2
ACBD6
VWA8
NAA25
CDC16
CLPX
SENP6
GSAP
LRRK1
CSNK1E
ZNF76
SETD2
SFXN1
CCN2
NLRX1
STAG1
NFKBIA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZNF207
C17orf75
PARP8
HNRNPAB
EIF3A
KIAA1191
ARL10
ZNF131
AVEN
EEF1A1
REPIN1
ZNF775
UQCRH
LRRC41
BEND3
PTBP1
OCIAD1
ZNF562
NFIC
GMEB1
RAD23B
TASOR
ARPIN-AP3S2
ARPIN
USP21
UFC1
SLC9B2
ZNF292
SDF4
B3GALT6
MSL1
SEPTIN8
PRTFDC1
KAT6A
HDGFL3
KMT2D
RHEBL1
ZCCHC3
C20orf96
PRRC2B
JMJD1C
S100A13
S100A1
CHTOP
SLTM
ZNF236
REEP3
MYH9
AGPAT3
PBX2
GPSM3
IMPACT
AGER
H6PD
ODC1
MATR3
UIMC1
BRD7
TLK2
ZNF101
ATP13A1
GTF2IRD2
ZNF777
NME1-NME2
NME1
TCTE3
ERMARD
TM9SF4
DNAJA4
TUBGCP3
ZC3HAV1L
GABPA
ATP5PF
MACROH2A1
RCC2
GPD2
SLC7A1
UBE2E3
TNPO1
CD68
EIF4A1
LOC100996842
MPDU1
RPL5
DDX50
GBA
VDAC1
TRMT2A
RANBP1
TEDDM1
GLUL
SMNDC1
NUCKS1
HMGN2
DOK2
XPO7
BCL7B
CIPC
SQSTM1
RPTOR
RPS6
PCIF1
GMEB2
C7orf26
ATIC
CNIH1
YBEY
MCM3AP
ZNF274
NUFIP2
RACK1
KRCC1
HINT1
CPLANE1
NSMCE4A
CCNJ
ZKSCAN7
RBM33
YARS1
S100PBP
ARHGDIA
TMEM106B
ZNF428
SRRM5
ZNF346
SYNGR2
ZFR
USP24
FABP6
C5orf51
DCPS
CANX
UBAP2L
C1orf43
MCCC2
PTBP2
RPS3
DIS3L
CCAR1
WDR43
INO80
SCLY
HDGF
MRPL24
UBE2J2
ZNF407
NUAK1
AKAP10
GPX7
MAGI2
DCAF8
TSEN15
SIL1
RAC1
MPDZ
NRF1
SMC3
DYNLL1
HMGCS1
BAZ1B
SRSF9
ZNF787
KIAA1614
DYRK1A
C1QBP
AIG1
RGPD1
RGPD2
DENND6B
PHF13
KANSL1
THAP3
TENT2
UPF1
SLC25A6
RDX
QSER1
H4C12
H4C11
H2BC15
H2AC15
ELOB
PRSS33
TMEM62
HECTD1
SFT2D3
KDF1
METTL15
KIF18A
SUCLG2
RPL29
TARDBP
SOCS5
PCNP
ZNF354B
CHURC1-FNTB
CHURC1
ECPAS
SUMO3
NPEPL1
RNF169
ABCB10
VPS16
PCED1A
AMPD3
EZH2
PPP3CC
SRSF1
CCDC85B
ZC3H7A
FOSL1
NAB1
MAML1
PAN3
SLC25A46
CUL1
STS
PUDP
MRPS2
C9orf116
ATP5F1E
RPL3
SCMH1
GALR3
CLCN7
MARCHF7
SUMO2
RCC1L
PHC3
FBXO7
LOC107984974
FKBP8
CHADL
MTMR2
KMT2B
MCL1
CREBZF
RAD21
NFYB
KPNB1
ATF4
KBTBD3
AASDHPPT
ZBTB17
KDM2A
NDRG1
LARP1B
PHF11
CDKN2C
SNRNP35
ATXN7L3B
MLLT10
SKIDA1
DCP1B
TXNRD3
RPS15
FAN1
C1RL
PHIP
RPSA
IDI1
WDR37
BCL2L13
ATP6V1E1
USP37
CNOT9
RAB11FIP2
ANKRD9
RAD54L2
ERBIN
IRF2
RUFY1
TUBGCP5
MICOS10-NBL1
MICOS10
HENMT1
MRPL48
SNX19
NAPEPLD
TLE5
MANSC4
KLHL42
LTN1
ZNF764
CTSW
EFEMP2
EAPP
HUS1
OBI1
EIF4H
ZBTB47
TACO1
TRMU
CNBP
GATAD1
RPL19
CACNB1
PNMA8B
CTCF
DCTD
TMEM268
BRD4
AGMAT
SMAD4
EPC2
POU6F1
ZNF789
ATP5MF-PTCD1
ATP5MF
NFKBIL1
DDX39B
ATP6V1G2
FAM160B1
PPP4R3A
EIF4E
UBE2Q1
CHRNB2
C5orf24
PHF3
MAN2A2
MRPL19
C19orf12
FAM160B2
ZNF358
MCOLN1
COL23A1
ITPRIPL2
BRIX1
ZNF326
PABPN1
TLK1
TAF4
LTV1
RPL32
CYB561
SIPA1L1
TMCC1
B3GNT5
HDAC2
DHX15
SMIM12
MFSD14A
MYBPC3
MTMR10
NDFIP1
BMS1
RPS3A
HNRNPL
ILF3
ZNF398
UCK2
REV3L
UBC
TMEM94
ZBTB6
RC3H2
USP40
IMMP2L
REXO4
ADAMTS13
PHC2
OBSL1
INHA
ZKSCAN2
CTF1
BCL7C
SKP1
C9orf64
PRADC1
CCT7
ITGB1
KEAP1
MAP3K20
COX7C
ATN1
WDR82
GLYCTK
SREK1IP1
CWC27
MAP2K2
SLC20A1
ZFP2
P3H4
FKBP10
NACA
CRADD
MRPL23
DPY19L4
PCBP2
RPL21
MPPE1
ACSF3
ITSN2
MCMBP
PRR25
GNG13
IAH1
CERS2
ANXA9
VPS4A
NIPSNAP2
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
VAPA
POLR2M
RNF6
EIF3B
DPYSL2
RPL35A
IQCG
LMLN
ZNF770
TBC1D5
BOD1
ZNF384
MORF4L1
SMIM10L1
PRH1-TAS2R14
JPT2
MACROH2A2
GABPB1
DEDD
G3BP1
RPP38
ACBD7
TRIM44
PRDM2
PCBD2
DCAF10
ZNF341
ZNF619
PPP6R2
RPL12
LRSAM1
SAR1B
RPS15A
TRNT1
MSRB2
DRAP1
C11orf68
PIP4K2B
ETAA1
RPL37
CARD6
TPT1
KMT2A
JAGN1
CASD1
MRPL21
IGHMBP2
NSFL1C
MTHFD2L
PEX7
SLC22A5
SRSF11
SNRPD1
HSPA9
HSPA8
NFKBIZ
RPL9
LIAS
ZBED1
DHRSX
MRPL39
GADD45B
TEX22
FAM228B
STOML2
PIGO
FAM214B
RNPS1
RPL35
ARPC5L
WDR38
PFN4
EEF1AKMT1
SGCE
PEG10
DDX6
INTS2
BRAF
NCKAP1
DAZAP1
GAMT
DHRS12
ZNF496
SETD7
DHX30
HMGA1
RCN1
RPL17-C18orf32
RPL17
C18orf32
TTC17
ING5
ARRDC3
TAF12
TBRG4
ODF3L2
MADCAM1
PLEKHM3
ANXA4
RFX8
CENPV
TAPT1
PFKM
SENP1
AFG1L
ZZEF1
CYB5D2
DENND4B
BFSP1
BACH1
DRAM1
KCMF1
TMED9
B4GALT7
RPL11
PTPN21
AFG3L2
ZNF70
VPREB3
CLIP4
MAN2C1
XBP1
PIM3
COIL
TUT4
COX16
D2HGDH
SURF4
EEF2
TAF15
ATE1
HNRNPD
MYH7B
GSS
KLHL9
DERA
EPM2A
CTSZ
USP30
HNRNPU
CKAP2
VPS36
CPSF6
PICK1
SRSF10
TTI1
RPRD1B
RITA1
DDX54
CBX8
TCF7L2
FAXC
DDX1
ACTRT3
MYNN
RFX3
USP47
TTC3
PIGP
CTSO
NOXO1
RPL27A
UCK1
CAPZA2
RXRA
SDC4
GFER
SYNGR3
HHIPL1
HOXB6
HOXB7
HOXB8
KRT17
BEX3
GIGYF1
KRT16
SUMF1
RAB1B
PLEKHA1
ZNF717
OMA1
DAB1
FBXL5
SREBF2
MTA1
EGFR
COMMD1
CCT4
LDAH
GTPBP4
RBM12
CPNE1
CHMP6
ZNF518B
GABARAP
ELP5
CTDNEP1
VAMP2
SSBP2
DYNC2I2
MMAA
EP300
TUBA1B
UHMK1
TIAL1
SNX5
MGME1
FBXW11
CCDC97
TTYH2
RPL38
PET117
KAT14
CSNK1G3
EBAG9
FBXL17
SORBS3
PRKAA1
ABTB1
SNX17
ZNF513
EIF2B4
EXOSC6
CIZ1
ARSB
PPRC1
SNRNP70
THUMPD3
CKLF-CMTM1
CKLF
TK2
GGACT
NELFCD
PDXDC1
TMBIM4
PPIP5K2
GIN1
ZNF621
PHF19
CCNG1
LIG3
COQ9
CIAPIN1
CCNT2
GTF3C3
C2orf66
LZTR1
LRRC47
MAN1A2
BCL2
IRF2BP2
SMAD1
KATNAL2
PIAS2
MTRNR2L1
GDI2
FAM98B
SETD5
DDX19B
AARS1
PSMD14
AGO4
GSTA4
ALKBH3
TCF12
ADO
RBM27
MRPL52
MMP14
RNF44
CDHR2
ZNF319
USB1
SCP2
PRRC2C
SMARCC1
SMC1A
RIBC1
EMB
ECHDC2
RPS8
ZBTB7A
PRKAR1B
SPOP
RYK
GEMIN7
ZNF296
ANP32E
IREB2
PPP6R3
NINJ2
MGAT4B
ZNF629
MICU2
ZNF302
SMARCA4
ACBD3
WDFY3
EPHA2
LACC1
CCDC122
CDV3
TMEM88B
FJX1
ANKRD65
CKAP5
DENND1B
TMEM185B
PGAP4
FRA10AC1
PPOX
PABPC4
CLK1
CDC7
IQANK1
FAM83H
USP25
ZNF862
NAXE
GPATCH4
PFDN4
PRELID3B
NSRP1
MMADHC
POLE2
KLHDC1
TUSC1
CDC42EP1
AGO2
MKLN1
NAA60
DMTF1
DUT
NHLRC2
DCLRE1A
YEATS2
UNC119B
RPL22
RNF207
SPRED1
ZBTB8OS
RBBP4
RUSF1
MTRR
FASTKD3