ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9730735 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◣ SRX9730735: THP-1

◢ CDK9: STRING

PABPC4
UBC
TAF12
H4C6
H1-3
H3C6
H4C7
H3C7
WDR74
STX5
EAPP
NFYC
KIF2C
SLC3A2
H1-2
H3C3
H4C12
H4C11
H2BC14
H2AC14
H4C3
H1-6
ZNFX1
SRSF3
H2BC15
H2AC15
EGR1
H3C13
H2BC18
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
YBX1
ZMPSTE24
TMCO2
HSP90AB1
SLC35B2
TMEM107
H3-2
PARP16
MAT2A
CITED4
KLF7
NDUFAF3
IMPDH2
DALRD3
EIF4A2
HSPA1B
EEF1A1
H2BC21
H2AC21
H2AC20
RPL10
DNASE1L1
H4C2
H3C2
H2AC4
H4C1
H1-10
EIF1
ZFP69
TUBA1B
RPLP0
GCN1
EXO5
ID1
SRSF7
CD68
EIF4A1
LOC100996842
MPDU1
SIRT4
H3C1
H1-1
PPIA
HNRNPAB
CTPS1
RPL10A
H2BC8
H2AC8
MCL1
H2AX
DPAGT1
HMBS
FUS
TRIT1
ZBTB37
RPL12
LRSAM1
TXNIP
STX10
IER2
PRDX2
JUNB
SLC39A10
AMD1
CCDC30
ZMYND12
PPCS
H4C4
H2BC6
H2BC5
H1-4
CFD
ELANE
SLC16A3
ZNF124
H2BC3
FASN
PABPC1
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
ACTRT3
MYNN
TRAF7
RAB26
ID2
GPX1
FAM166A
STPG3
TUBB4B
MRPS18B
ATAT1
NFKBIL1
DDX39B
ATP6V1G2
POLG2
DDX5
RAB13
UQCC3
LBHD1
RPS27
PNP
PIP4P1
CSKMT
C11orf98
TIMP3
NASP
SEPHS2
HSPB1
ATF4
P4HB
MS4A7
HNRNPH1
CA2
CALR
RAD23A
FARSA
SRSF2
MFSD11
METTL23
JMJD6
H2BC9
CCDC200
H4C8
TNFSF9
FTL
S100A4
S100A5
S100A6
S100A3
UNK
H3-3B
LAPTM5
RPS3
PRRC2A
AIF1
RCC1
NFKBIA
EEF2
PTMA
ZBTB4
SLC35G6
POLR2A
HNRNPA2B1
CBX3
RPS11
RPL13A
PARP2
NCL
CCNB1IP1
HMGB2
CEBPA
BBC3
H2AZ1
DNAJB14
TKTL1
TEX28
REEP4
ZNF669
DNAJB4
RPL5
H3C8
H2BC10
TUBB
MDC1
ZFP36
PLEKHG2
PPIF
H3C4
FOS
C19orf48
ATAD2
RPS20
RSRP1
TEDDM1
GLUL
SMAP2
RPLP1
SLC25A11
RNF167
PFN1
ENO3
STAT1
TRIM27
H1-0
GCAT
RRM2
ZNF670
INO80D
POLDIP3
C6orf62
CIRBP
FAM174C
IL4I1
NUP62
ATF5
TAF1D
C11orf54
ZNF93
RPS8
PCIF1
TMSB4X
RBM14-RBM4
RBM14
PCBP2
H2BC4
H2AC6
CAP1
CITED2
ZC3H10
RPL41
GRB2
CDC20
ELOVL1
MUS81
CFL1
MFSD2A
RBMX
ST3GAL3
MBNL1
MYH9
H4C13
H3C11
H2AC16
H1-5
HSPA8
VPS29
RAD9B
PPT1
RPS6
SLC25A6
SLC38A2
VPS52
RPS18
B3GALT4
HMGN2
EIF5
TASL
YWHAH
C22orf24
S100A13
S100A1
CHTOP
GBA
COQ8A
AHCTF1
CGAS
MTO1
INTS6
ACTN1
RNF220
ERMAP
SVBP
LUC7L2
H2BU1
H2AW
NSD2
LMNB1
TUSC1
ZNF684
IBA57
H2AC7
H4C5
H2BC7
ANKRD13D
CYCS
TUBA1C
RPS23
ATP6AP1L
ZNF438
MARCHF7
RPS2
RNF151
TBL3
NDUFB10
RPL3L
C6orf226
VASP
PPM1N
PPIE
LDHA
CBX5
HNRNPA1
SUPT5H
RPS16
JMJD1C
USP4
HEXIM2
SDE2
TRA2B
GDI2
GLO1
SELENOT
NPM1
HYLS1
FAM200B
COL9A2
PRKCD
RLF
PPP2R5D
PEX6
CTBS
E2F3
SRGN
WSB1
SRSF6
H2BC17
H2AC17
H3C12
HSPA5
PDLIM7
LMNA
PTBP1
GTF2A1
ZBTB45
CLTA
TRIM28
PTPN6
C12orf57
PTGER4
DDX59
DPYSL2
ZNF92
OARD1
NFYA
RPL3
TPM3
NPIPA3
NPIPA2
PLA2G10
PRR25
GNG13
DENND4B
TP53BP2
GAPDH
H2BS1
LAT2
TSPOAP1
IRF1
DESI2
SRP9
TEX30
ADAMTS1
SPI1
DDX3X
AGPAT2
ANP32E
NSMAF
H3C10
H2BC13
H2AC13
ARF1
RPS29
HMGB1
VPS28
TMEM70
ELOC
ZNF143
AZIN1
NRROS
SZT2
MED8
IRF8
BZW1
CYBA
TBCC
BICRAL
COX18
CCDC85B
FOSL1
SRSF5
FOXP1
SF1
MEF2D
ZSCAN31
DDX19B
AARS1
TRIM11
TRIM17
SMURF2
LOC730098
CCL27
MATR3
C6orf47
APOM
GPANK1
CSNK2B
LY6G5B
KIF5B
ATP23
TMBIM4
NDUFV3
CCNL1
EIF4G2
NLRX1
ZNF691
SRSF10
PDCD6
MACROH2A1
CALM2
CLSPN
DCAF12
SURF2
SURF1
RPL7A
MED22
SLFN11
RPL17-C18orf32
RPL17
C18orf32
PMAIP1
FAM133B
RFX3
RPS10-NUDT3
RPS10
ZWILCH
SNAPC5
RPL4
TARDBP
TAOK1
PKMYT1
DUX4
MIA3
TMEM69
GPBP1L1
NCOA5
MLLT11
GABPB2
ZNF672
LY6G6F-LY6G6D
LY6G6F
ABHD16A
ANP32B
LAIR1
ZNF274
CDC42SE1
ENO1
PBLD
HNRNPH3
ZFAND3
TFRC
RPS3A
TPT1
UHRF2
ZC3H6
NUCKS1
MSN
SLC20A1
SCMH1
DPH2
B4GALT2
ATP6V0B
ZNF696
RPS15A
HNRNPA3
RNASEK
C17orf49
BCL6B
RPS19
ADPGK
MCM7
AP4M1
TOMM20
CAPRIN1
MS4A6A
RPLP2
PNPLA2
PIDD1
RXFP4
KHDC4
RELT
RPL30
RPL32
METTL21A
TCTEX1D1
UBE2D3
CC2D1B
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
NEK8
RPL23A
RAB34
TLCD1
PROCA1
SNX33
IMP3
UNKL
OAZ1
GMNN
LDHB
SLC39A7
RXRB
RING1
HSD17B8
CCDC137
FUCA2
ZNF253
BAZ1A
GTF2IRD2B
JUND
IQCN
NLRP3
CHST11
SLC22A16
HNRNPUL1
CLK1
ZC3H4
SGK3
MAF1
CYC1
SART1
ZNF451
MAN2C1
ZCCHC3
C20orf96
NKIRAS1
RPL15
EDF1
ARF6
BAG6
ZFP69B
CD19
RABEP2
P2RY2
GADD45B
TPM4
NIPAL2
H3-3A
SLC26A8
MAPK14
UBA52
ARHGAP35
AP2S1
HSPA9
RPS12
FOXD1
ZNF273
STIL
NACA
FBXO4
SREBF1
ERLIN2
PAK2
UBE2I
MYBL2
LEMD2
UBE2L3
XKR9
LACTB2
GPR160
S100A11
ZNF517
ZNF34
RPL8
TMEM167B
TRIP4
PCLAF
ZFAND5
MYBPH
CHI3L1
DPP8
UCHL5
RO60
CCSAP
SP9
TOB2
NARF
CYBC1
TMPO
SLC25A3
CEBPG
MYC
MDM4
NBN
LAT
SPNS1
ATXN2L
RPL27A
SLC27A3
COQ2
TBC1D3H
TBC1D3G
TBC1D3I
TBC1D3D
TBC1D3L
TBC1D3B
UBXN1
EFCAB2
RCC2
RPL21
MYLIP
FBXO5
PRRG2
NOSIP
REXO5
ERI2
PRR12
ACTB
PIGL
NCOR1
RBM12B
TOR4A
TCTA
RHOA
NSRP1
GOLPH3
METTL26
UBAP2L
C1orf43
NRL
RPS27A
CLHC1
HSP90AA1
PCK2
TPCN1
IQCD
PSEN1
WDR90
ILF3
NOP58
ZBED4
QSER1
CFLAR
DNAJC1
MRC2
CTNNB1
RPSA
DGKA
RPL26
KRBA2
PYM1
RACK1
RUNX1
C6orf89
HNRNPU
PKNOX1
PPIL1
STMN1
TAGLN2
RNPEPL1
DUSP28
ANKMY1
SREK1
PDE7A
NUDT18
PDCD6IP
TMED5
CCDC18
SLTM
PPP1CC
PUF60
SLC25A5
SUPT3H
HENMT1
HSPE1-MOB4
HSPE1
HSPD1
TRIM13
HNF4G
MYL6B
MYL6
TRAM2
FADD
IPP
RNPEP
FSCN1
PECAM1
SLC1A5
RC3H1
YWHAG
MYL12A
RPS26
BOLA2-SMG1P6
SRCAP
LOC730183
MOB4
GMEB1
DNAJB1
RMI1
HNRNPK
RPL23
TRAPPC4
RPS25
ADGRE5
BVES
RHOB
POLM
PRTN3
NFX1
CELF2
KAT7
NRDC
PPP1R15B
RPL36AL
MGAT2
ACTR2
ZNF131
DDX50
GNG14
DHPS
RXRA
RIPK1
EZH2
DHX9
ARHGEF2
GRK2
STARD7
EIF2S2
RBM25
TSPAN10
NPLOC4
NUDCD2
HMMR
POLG
SACM1L
EIF3A
SDCBP
ARF4
WDR4
SLC25A10
MRPL12
HNRNPL
CEP192
TBRG4
TPI1
SPSB2
ATXN7L3
RPL18A
ZNF200
GNAI2
ZBTB25
ZBTB1
TRIM52
UCK2
RABGGTB
MSH4
SERP1
EIF2A
DOCK8
DNPH1
IRAK3
PTPN7
C9orf85
ABHD17B
IL17RA
RGS16
LYN
HDGF
SLC39A1
CREB3L4
MRPL24
PKM
PNRC2
JTB
TOE1
MUTYH
C16orf72
PAIP1
NSUN4
YTHDF3
PAF1
RAC1
PRCC
PTEN
KLLN
KRCC1
HNRNPDL
ENOPH1
ZNF280D
SMIM19
SLC20A2
CKS2
SECISBP2
IDI1
WDR37
TCERG1
HSPA4
ANXA5
ABTB1
GABPB1
SNRPD1
RPS15
KLF10
TRIM25
BCOR
SPHK2
RPL18
FAM83E
TOMM6
PRICKLE4
FRS3
UGP2
IMMT
MRPL35
RBM8A
PEX11B
STT3B
ZNF700
C9orf64
RPL22
RNF207
CANX
PPP4C
ALDOA
CSE1L
LSM8
RIC8A
BET1L
CENPC
TYMSOS
TYMS
NOCT
ETFRF1
CFAP94
KLHL15
FAM43A
AVEN
NNT
KCNQ4
SFT2D3
ZBTB22
TAPBP
DAXX
RNASEH2B
DDX60L
PRRT2
MAZ
PAGR1
SUMO2
YWHAZ
SQSTM1
DDX39A
MTCH1
DYNC1H1
SMARCB1
ACOT2
SRSF1
LAMTOR1
WDR82
GLYCTK
PLEKHA4
ANAPC15
C2orf69
RBBP6
HMGA1
PPP1R15A
ELOB
C12orf65
PRSS33
MOB1A
GTF2IRD2
MSH6
TGFBRAP1
C2orf49
RPL35
ARPC5L
GATAD1
DDX17
BRPF3
RNF135
SPPL2A
PFKL
COPS3
PUM1
LOC100287896
LIPT2
COX7A2
SINHCAF
HYI
PLK4
ATL3
MRPL2
KLC4
CUL7
TOPORS
SMIM27
SCAF11
CPT2
ERV3-1-ZNF117
ERV3-1
MAD2L1BP
GTPBP2
MKNK2
NUDT15
EIF3L
ANKRD54
MFSD14B
SNRPG
FAM136A
ZNF207
C17orf75
HNRNPA0
CARD9
MBD6
DDIT3
ZKSCAN2
TUBGCP3
ADAT1
SF3B3
COG4
WDFY1
UBA2
N4BP2
DIP2A
PRDX1
CDC37L1
GGNBP2
MYO19
PIGW
PPIH
TMEM190
TMEM238
RPL28
NDUFB1
CPSF2
AFG3L2
PTER
PPDPF
SETD1A
ORAI3
CD164
YRDC
C1orf122
PSMB8
ANAPC7
TAP1
TAP2
PSMB9
LRIF1
IDH2
MTF2
GTPBP4
HMGN1
PLPPR3
AZU1
PSMD8
RBM12
CPNE1
GMIP
THSD7A
TPRN
TMEM203
NDOR1
SFPQ
EIF4B
SKIL
PI4KB
ODC1
MSRA
USPL1
P3H1
CDKN2C
FAF1
VDAC2
MBD4
IFT122
CREBZF
TBL2
SELENOH