ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

NLRP12
VASP
LILRA6
LILRB5
AKR1C3
DUX4
WDFY3
FMNL3
GATA4
TMEM45B
SPATC1
FRG2C
LAMP1
TMEM39B
DENND3
NFKB2
SEMA4B
GNA15
MEF2C
PLSCR1
ADGRG1
OR10J1
XRCC5
SFTPD
ABT1
ZDHHC3
EXOSC7
AGTRAP
GNG2
KLF2
GSTA4
MTRNR2L1
CMPK2
CALCOCO1
TLR4
IL1B
FEM1A
CD40
SPDYE13
CBFA2T3
PPIAL4C
CALR3
C19orf44
SLC18A2
PGK1
ITGB2
A2M
PRSS3
RPS19
MRGPRG
MRGPRE
AXL
CXCL8
IL7R
SMPD3
STEAP4
GPBAR1
PTK2
NUDCD1
CXCL1
PDLIM2
UBXN8
BOD1
SIGLEC11
SLC12A6
NUTM1
NOP10
PSTPIP1
CCL26
NIBAN3
H4C12
H4C11
H2BC14
H2AC14
FGF6
RNF149
APOL6
SPDYE9
SPDYE8
SPDYE15
SPDYE11
ZNF221
ACTN2
NAA80
IFRD2
HYAL3
DNAJC5B
NAIP
DMPK
DMWD
FRG2
NEDD9
SUN1
H2BC15
H2AC15
CD1A
DAZAP2
DOCK8
SNX11
CBX1
GLRX
NCF2
CD1C
AP2B1
PEX12
COL8A2
IVD
ALOX15
CLEC4G
DCAF12
TMEM104
NAT9
GBA
NR3C1
H4C3
H1-6
TMEM91
B9D2
CES1
PPIAL4H
TPCN1
IQCD
MAP3K5
DDX58
LIFR
TMTC3
CEP290
CCDC200
SPDYE17
NBN
LRP3
ASGR2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
GHRL
KBTBD6
AKR1A1
H2BU1
H2AW
CTU1
EXT1
NLRP2
PPP1R12C
BCL3
B4GALT3
GPR88
EAPP
INTS9
HMBOX1
MTMR9
RPS20
CLPB
ZNF780A
CYTH4
MS4A3
SMCO2
ZFYVE1
NPRL2
TMEM115
CYB561D2
ZNF444
HIKESHI
SH3BP2
PBK
BID
UBAP1
PIK3CB
HLA-DOA
MINDY3
SPINK8
HDGF
MRPL24
FBXW4
CYRIB
EXD1
CHP1
DYNC2H1
TASL
CTDSP1
TSNAXIP1
RANBP10
VCPIP1
C8orf44-SGK3
ZSCAN30
DNAH2
EFNB3
USP3
NDUFS7
NUF2
C10orf105
SIGLEC6
SIGLEC9
RPL36
MICOS13
HSD11B1L
PANK4
HES5
CD33
GPAA1
EXOSC4
CEBPD
RAB4B
MIA
LAMB3
VWA3B
SPRED2
NABP1
EDDM13
TRABD2A
LTB4R2
LTB4R
CIDEB
PEX3
ADAT2
RUBCNL
HPSE2
ST3GAL2
NBEAL2
CCDC12
SIGLEC5
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
KBTBD7
PAFAH2
RFX1
SUCNR1
PROS1
ARL13B
ZNF225
SLCO2B1
NEUROG1
SLC23A2
ZFYVE28
CFAP99
TESK2
MMACHC
CCDC163
PNKD
AAMP
NFATC3
CCR5
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
MITD1
BRF2
BMF
SLC1A5
TPRKB
BTRC
IPCEF1
JAML
CLCA2
TRPV4
S100Z
CMIP
LOC102724770
DGCR6
MEFV
TNFRSF10B
SST
KIF25
PLEKHM3
RAB24
PRELID1
DHRS7B
MTF2
ADGRE2
CHMP4B
PPRC1
NUDT4B
LIM2
TP53I11
H3C13
H2BC18
MRPS18C
HELQ
TMEM243
FCGR2A
GSPT1
DDX18
BAZ1A
TYROBP
NFKBID
HCST
TAF12
GAB2
RMND1
ARMT1
INPPL1
FOLR2
MS4A6A
CCDC152
MUCL1
TRIP4
PCLAF
RAB39A
PPIAL4F
PPIAL4E
PPIAL4D
INVS
ERP44
ALOX5AP
TOR1AIP2
TOR1AIP1
F11R
DHRS12
GNA11
AP1B1
ARHGAP35
AP2S1
CCAR2
C8orf58
ARHGAP25
FIGNL2
KCTD12
LCP1
PHB
KRR1
TM6SF1
PROKR1
SEPTIN9
MED23
ENPP3
CTSB
ZNF226
CCDC102A
ADGRG5
P2RY14
DISC1
UCKL1
NDFIP2
PEMT
CARD8
EHD1
RFX2
PDE6H
FRG1
RMDN2
KANSL3
FER1L5
IFI16
RAC2
IL1RN
COPS7A
DHX16
PPP1R18
NRM
BANK1
RNASE3
ZNF227
TMEM107
CTTN
LRRC37A
CSF1R
HSH2D
MTRNR2L6
PAF1
ZFP36
SLC37A2
YES1
CCDC146
GRPEL2
ENOSF1
LMO2
SNCA
KIAA0930
PPP2R2B
ARID5A
TBL2
NME7
BLZF1
TAF1B
CAMKK1
INPP5D
CCER2
ZSCAN22
POMP
EIF4G3
ANKRD63
ZCCHC4
CD82
STAP1
DNAJC10
CLEC10A
ICAM1
CASS4
ITGA4
ALDH2
ATP1B2
PRCC
CACNB4
FCGRT
IGF1
INSC
IER3
FLOT1
SIGLEC1
RD3L
ADGRE1
DCP1A
MLLT1
RASSF4
LRRC37A3
FAM227B
DTWD1
TAL1
JOSD2
ASPDH
MMP9
SERPINB6
SORBS3
CHI3L2
ARHGEF12
WASHC4
UTP3
GPR68
TXK
DUSP6
PLEC
SMC6
GEN1
PARP10
GRINA
PGBD4
EMC7
SREK1IP1
CWC27
ANKRD39
SEMA4C
AURKAIP1
HMOX1
LAT2
GATB
INTS12
GSTCD
NOTCH1
SAMSN1
MKNK1
PRRG2
NOSIP
RYK
CHST13
MTIF2
SH2D3A
VAV1
PRKCE
GALK2
COPS2
AHCYL2
RPS7
ANKRD18B
IPPK
RIPK1
VPS26A
TBC1D19
S100A8
FGGY
CA13
FRA10AC1
ULK1
SCAMP4
ADAT3
ABHD17A
TMEM154
TTC33
TEFM
RASSF5
ARPC3
TPM4
OLFML2B
ABCA9
MLLT11
GABPB2
PHC2
RUNX1
SMAD2
UBR1
ASPHD2
FBXO46
MEIOSIN
CTSG
TMEM231
PRR5
LILRA2
OBI1
RFFL
CAPG
CNDP1
DTX2
SHISA5
TREX1
TRNP1
RAB27B
GOLGA8Q
ERLIN2
SSBP2
NOD2
POLE3
C9orf43
PPP6R1
MARCO
UBE2T
PPP1R12B
SYMPK
FOXA3
TEAD3
TBPL1
CELF1
DPY19L4
PDXK
SSBP1
SF3A3
LYSMD2
RPL6
PTPN11
TMEM68
TGS1
TNIP1
CCDC149
ARHGEF3
VPS13B
DR1
NFE2
RPL5
THEMIS2
DDX1
LYRM1
BSG
ZAR1L
BRCA2
PIK3CG
LRRC71
SYT8
TNNI2
TSSC4
PHF12
FASTKD1
YIF1B
KCNK6
LCE3B
LCE3A
NCALD
MPEG1
RBBP5
DHRS4L2
ACTRT3
MYNN
GOLGA7B
IFNA21
PAQR8
WDR74
STX5
SLC39A1
CREB3L4
CRTC2
PEAK3
LSM14A
MAP1S
SLC35B4
BORCS7
ZNF268
ZC3HAV1
SLC25A10
MRPL12
DHX8
XCR1
SLC35F5
H3C3
H2BC3
ADGB
H4C6
H1-3
H3C6
VOPP1
RPS6KA1
LIPM
RPL18A
SCRIB
NDUFB7
JAK3
BCL2L13
MRPL42
RNPEP
PROB1
SPATA24
SYNE3
CEACAM21
IRF9
DMXL2
GTF2H2C_2
FAM228B
GTF2H2C
TP53I3
SF3B6
BNC2
BCAN
CARD19
CSF2RB
TRIM31
PPP1R11
POLR1H
RNF39
RPIA
ANXA2R
FAM133B
LCMT2
ADAL
ZFP64
LYN
ZNF554
SECISBP2L
PTK2B
TRIM35
NSMAF
SPAG9
FASLG
RPGRIP1L
FTO
ARHGEF18
TACC1
ALG10
RNF157
PIP4K2A
RPH3AL
GTF2H3
EIF2B1
TTC14
MOB1A
FAM167A
SLC24A1
INTS14
STK10
PCBP2
ZNF350
DPY19L3
RALB
NDFIP1
SEC14L1
ZBTB45
SLC27A5
ZNF56
PPIP5K2
GIN1
CD79A
TCTEX1D1
LPO
NDUFS2
ADAMTS4
MRPL48
ZNF224
NINJ2
PLVAP
PDE4B
CCR1
PRODH2
CUEDC1
PLAC8
DSTYK
EPN1
PLCXD2
MRPL1
ZC3HC1
RXRA
DPYSL2
CAMK1
OR1D5
CCDC88A
PARP2
USF1
TSTD1
CCNB1IP1
TMEM242
CDK5RAP2
ZNF595
IRX5
CRNDE
CCDC90B
NPY4R
NPY4R2
METTL9
JRK
CHCHD5
INO80D
FCAMR
HCK
SLC38A10
FCGBP
PLEKHA4
PPP1R15A
FUT10
PSMA8
LSG1
BRPF3
PPM1M
TWF2
KCNQ3
SDSL
TMEM212
SEC11A
TMEM229B
SCHIP1
TACO1
ACTA2
HFE
CHRNA6
NUCB2
PCM1
TTI2
TULP2
NUCB1
KLHL33
XYLT1
ZNF235
SCAMP2
SELPLG
CMKLR1
COMMD2
H4C4
H3C4
H2BC6
LILRA4
SNX17
ZNF513
EIF2B4
HUS1
ADAR
PSMF1
SIRT2
NFKBIB
MRPS23
AP3S2
ASF1B
CCDC9
PEX2
PIGV
TSC1
GFI1B
EMILIN1
OST4
KHK
TPK1
APPL2
RHOH
DCANP1
PHF2
SMG6
CAPN2
IL17RD
CAVIN2
PYCR3
GFUS
ZNF518A
ZNF286A
ANKRD40
STX7
SRXN1
SLC1A4
H2BC5
H1-4
TFPT
PRPF31
SLC39A13
ADPRH
PLA1A
RIC8B
ZNF140
LMBR1
CERS3
MIER2
CD93
CALM3
PPP5D1
CHMP7
GNB4
STING1
TIFAB
LARS1
TEX46
KDM1A
SAMD4B
GMFG
SNTB1
TMEM222
KDM6B
LPAR5
ACRBP
POLR2J3
TCEA2
MFSD10
VSIR
OLFML3
HMGB1
USPL1
UBR2
TYK2
HIVEP2
ZNF846
RBCK1
BCL2A1
NRG4
IDH3B
PDE4A
RPL37
CARD6
PRKD2
CPEB3
MARCHF5
KLHL20
GAS6
CD5L
AQR
ASAP1
MPRIP
RAB3IL1
OAZ3
MRPL9
NME1-NME2
NME1
SIRT4
MORF4L2
SPOP
FCGR1A
SUSD3
STON2
MAML2
UBE4A
HERC6
PLEKHG3
LRRC25
RGS12
NFX1
LRRC8D
CREB3L2
GOLGA8R
BRWD1
ZNF148
GTF2H2
SUPT7L
SLC4A1AP
TMEM131L
RASSF2
DEFA1B
DEFA1
OR52K2
EIF2D
MFSD14A
LGALS12
INTS10
PSMA6
ZBED4
MPG
RHBDF1
LPAR1
TMEM262
SCAF1
RRAS
TNFAIP1
IFT20
SAR1B
MCUB
ORC2
PALLD
PRKCD
GOSR1
INKA2
DDX20
INO80C
PRIM2
PLAT
ZC3H6
SIRT6
ANKRD24
UXS1
ACTR3
MKRN3
TRIP12
FBXO36
PSMD9
HPD
POLE4
PIWIL4
CTNNB1
MRPS31
FOXP1
ARHGDIB
RNASE1
TMEM41A
TRDMT1
N4BP2L2
KDM3A
HIBCH
POLDIP3
USP15
PES1
SEC22B
PEBP4
IQSEC1
TCN2
SERPINE1
PPP3CC
ADTRP
TMEM204
MED4
VAMP1
MARCHF6
H4C8
APBB1IP
TAPBPL
GNGT2
ABI3
TEX44
ESCO2
RRS1
ADHFE1
PLEK
ANKRD22
DDX23
TATDN1
NDUFB9
SLC22A18
MALT1
SHKBP1
PTPN3
PLAUR
CCNL1
PSMC1
ITPRIP
C1orf159
GPR108
CCND3
EPHB4
SLC45A4
C3
VPS50
HEPACAM2
ING4
H1-2
ALG10B
H4C7
H3C7
GFOD2
H2BC9
FAM207A
SLC44A1
ISG20
SLC22A16
TIGD6
HMGXB3
LIPA
EMC4
TRIM69
DCAF10
ARID3B
NUFIP2
NUBP1
XCL2
CWC25
VPS33A
RXFP1
THAP1
MRPL27
EME1
AOPEP
FBXW11
SYT15
ITGAM
ZNF420
ZMPSTE24
TMCO2
TMBIM4
HIP1
BNIP1
COX7A2
MICAL2
TUBA8
CRYBB1
MYO1A
PTPN6
C12orf57
COX7C
AGPAT2
GPR162
ZNF212
ASH2L
PSMA1
FNTA
EFHB
DRAP1
C11orf68
MYBPH
APOL4