ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

PAXBP1
FRG2
PMF1-BGLAP
PMF1
UBE3C
NPNT
OTUD7A
TINAGL1
SLC39A14
COL23A1
ZMYM3
FRG2C
KCNIP4
CMSS1
FILIP1L
LRP2
TTYH1
DACH1
COQ8A
PLA2G7
SSBP1
DUX4
C2orf83
KCNK18
BAIAP2L2
TNRC6A
NBPF1
STK38
EPN1
SYT2
ITPRIP
NECTIN4
FAM107B
POLG
ARHGEF35
POLN
HAUS3
B4GALNT3
TCF7L2
TAT
SPDYE14
SPDYE10P
SNX16
TFCP2L1
MAMDC2
CRYBB2
TSR2
LOC105370980
C1orf174
ARHGEF5
FXYD3
MTRNR2L2
MSH3
DHFR
ELMOD1
MTRNR2L8
LYRM1
DCUN1D3
ART1
NGB
RANBP2
CLTC
DYNLL2
SPDYE13
KRTAP9-9
KRTAP9-6
TMBIM6
ELAVL2
PLEKHG1
ZP4
LOC107986453
CYP2A13
ZNF804A
SLITRK3
SLC35F3
ZNF462
ELOA2
TES
OR5AP2
RNF135
ITPRID2
EREG
PDE1C
LDB2
ERRFI1
KRTAP2-3
KRTAP2-4
CLDN20
MBD2
UBAP2L
C1orf43
MAGEA2B
MAGEA2
CSAG3
RAPH1
PDE6D
COPS7B
MTRNR2L1
SCGB1C1
ODF3
SRSF5
E2F3
H3C13
H2BC18
TBC1D5
TMPRSS5
ANXA2
RABL6
SULT6B1
CEBPZOS
CCDC183
WASHC1
C11orf97
ACTB
DMBX1
RAB40B
FANK1
UBE2Z
SIMC1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
APPBP2
ECHDC1
SPIDR
TMEFF2
SPATA16
SUV39H2
ZNF165
OR1F12
TBC1D3H
TBC1D3G
TBC1D3I
TBC1D3D
TBC1D3L
TBC1D3B
SHTN1
CTAGE4
CTAGE8
C13orf42
PDLIM5
ZNF517
ZNF34
RPL8
PCBP3
IQCF2
UBC
HMGA2
ARFGEF1
IDNK
COL6A1
PHGDH
CD163L1
MBNL2
AREG
PTP4A3
GIMAP7
RICTOR
RAB11FIP2
TCERG1
SLC25A32
DCAF13
CBR4
ANTXR1
H2BC21
H2AC21
H2AC20
HNRNPA3
PPP2R5A
DSCC1
SLC25A31
H2BC17
H2AC17
H3C12
SCAF11
STRIP1
YBX3
PDIA6
LOC102724770
DGCR6
SLC35B1
COL6A2
SPATC1L
TOB1
KRT19
KRT15
STK3
BCL9
CPLX2
SLC38A9
DNAJC25-GNG10
DNAJC25
EGR1
UBR5
FBXO11
IER3
FLOT1
EIF3F
MFSD14B
BCKDHB
CCDC85B
CSNK1G3
FOSL1
PCMTD1
FAM149A
LUZP2
OR8J3
MND1
VPS35
ECH1
LGALS4
EGF
VCP
FANCG
HNRNPA2B1
CBX3
NFE2L1
SLC25A3
NCOA5
CHEK1
ARHGAP39
RAB4A
USP25
CTNNA1
LRRTM2
MAML1
ADAM15
SMNDC1
NFE2L3
GOPC
GALNT10
NOTCH2NLC
HSPA6
SIM1
SLC12A8
RMDN1
CPNE3
FAM193B
WNT9A
NOTCH2NLA
ZCCHC4
LMBR1
COMT
TXNRD2
DTD1
PCID2
CUL4A
NSFL1C
GRHL2
TCTE3
ERMARD
UBE2V1
DR1
SEPSECS
GOLGA6L10
NCK1
UBE2O
AANAT
CADM2
RXFP3
ENTPD7
CCDC200
ID1
UBE2D1
TMSB10
MRPS26
GNRH2
ZFP36L1
RPL18A
ZBTB38
SLC16A5
PTEN
KLLN
BZW1
UROD
HECTD3
BRAF
VWA2
CIB2
IGDCC3
EEF1A1
POLR2M
XPC
LSM3
SLF1
KIAA0825
TMEM71
PHF20L1
MALT1
EPM2A
KRTAP2-1
KRTAP2-2
FAHD2B
URI1
DIRAS2
SPIN2B
CLEC9A
GABRA4
SLC5A8
SPIN2A
OR5V1
SCGB1C2
SRSF2
MFSD11
METTL23
CBWD5
CBWD3
JMJD6
TRIB1
FH
DUSP5
FRMD3
CXCL2
OR6C70
SEC61A1
CBWD6
PDXDC1
LRRC58
MTHFS
MFAP3L
PHF11
H2AX
DPAGT1
HMBS
WDR43
MALSU1
CEP55
TRIM26
ZNF280D
FAM8A1
CCSER1
CSNK2A2
HMGB1
HDLBP
SLTM
RMI2
ZKSCAN1
PPP1CB
FDX1
CIBAR1
MID1
OR14I1
TMEM43
CHCHD4
SLC30A5
PCDHGA1
PCDHGA2
GPR15
CLDND1
LRRC37A3
SRPRB
FAM160B1
PPAN-P2RY11
PPAN
ANGPTL6
MPI
TUBD1
RPS6KB1
FMNL2
RESF1
FAM120B
C7orf26
PHTF1
VANGL1
RECK
METTL7B
TULP4
PCDHB5
INMT
MRPS23
PARG
SCO1
ADPRM
NDUFAF6
FGGY
PNO1
BAGE4
BAGE3
BAGE
ZHX1-C8orf76
ZHX1
OXR1
SMC6
GEN1
HERC6
FLT4
COL4A2
COL4A1
CCDC88A
SLC35A5
ATG3
SPATA2
SGK3
ADAP1
HNF4G
RPS20
PSMC5
FTSJ3
H4C9
AFTPH
H2BC11
H2AC11
GRPEL1
SMARCD2
CRPPA
ANKRD18A
EBPL
KRTAP10-12
LOC102724951
LOC102724843
LOC102724219
LOC102723360
TMPRSS6
PSKH2
NFKBIZ
PPARD
GCFC2
DENND4A
ZFP3
EXOC6
ENTPD6
CBR3
ZNF705E
FAM221A
TMEM269
ZFHX4
OGA
CACUL1
ATF1
SLC7A5
RNASEH2B
NOMO3
NOMO2
FECH
RCN2
ABCC6
CETN1
OSER1
TTBK2
TRRAP
TMEM130
LOC100287896
LIPT2
KCNJ2
RNF122
PPWD1
CENPK
ZNF800
CLN5
SECISBP2L
HEXD
FBXO34
WDR1
YAF2
MTAP
NFIB
RAD21
MAEL
ILDR2
CNR1
KRTAP4-6
KRTAP4-5
SLC7A14
ITPRID1
RPS2
RNF151
TBL3
NDUFB10
RPL3L
CEP120
ZFP91
LPXN
PAAF1
GSTO1
MAP11
LAMTOR4
BFSP1
LEPROTL1
SH3BP5
SLC22A23
PIN4
ELOVL6
FA2H
PRAMEF10
KLHL7
SEC63
CPSF6
GPD2
KITLG
H3-2
PTPRA
NCKAP1
TTC5
AK4
SPATA6
PCDHB12
PCDHB11
PCDHB10
UMOD
UBE2J2
USP36
EXOC2
WDR45B
CKAP2
VPS36
SLC20A1
LIG3
PCLO
SNX9
KRTAP1-1
SCYL2
DEPDC4
HORMAD1
JMJD1C
EXT1
ARRDC4
CHMP7
H2BC4
H2AC6
PTPN2
NFRKB
POMGNT2
EMB
LRP11
MLLT3
TBC1D3K
TBC1D3
TBC1D3F
TBC1D3E
CTAGE15
ABRAXAS2
PTMA
ZDHHC3
EXOSC7
SRRM2
EIF3A
PET117
KAT14
HOMER1
SFT2D3
PRKAR1A
INO80D
SYBU
TBC1D2B
ZNF697
SPG7
PANX1
PAM
HSF1
BOP1
LOC100996750
KRTAP4-7
NUTM2D
SEC13
FAM207A
NXF1
RNASEH1
NOCT
DDX59
IMPACT
XYLB
RANBP9
TMX4
C3orf70
SLC7A1
TMEM268
MYZAP
GCOM1
DYNC1LI1
SMYD3
ATMIN
SULT1B1
KCNS1
UHMK1
CYREN
TMED7-TICAM2
TMED7
CLK4
NDFIP1
FBXL4
LPGAT1
NEUROG2
MAP3K21
MLYCD
GRK3
EGFR
PCDHB16
PCDHB8
PCDHB7
PPP1R2B
TFRC
ZSCAN25
ZNF124
RAD23B
CKAP5
RWDD3
DEPDC7
MYO5A
CACNA1E
CKS2
SECISBP2
ZNF337
LRRC59
SLC38A2
EXO1
DUS1L
YBX1
CPOX
NR4A2
PTK2
APEH
PTS
GPRC5C
MIB1
TKT
ENGASE
TMEM100
UNK
H3-3B
REXO1
GNAL
GPS2
EIF5A
EIF4A3
PSTK
SPDYE6
LOC100289561
KDF1
PIBF1
DIS3
INPP5F
TPD52
CUL1
LAT2
CST3
IRAK3
IDH2
PCDHB14
TMEM202
KLHL41
SARDH
PARK7
WDR4
WASF1
CDC40
MIDEAS
PTDSS1
MTERF3
PER2
PKP4
CCDC148
MYO18A
TLL2
ITGA6
MAFF
FAM220A
ANKRD18B
NIPAL2
MAP3K14
USP10
DPY19L2
ELAPOR1
PCDHB2
PCDHB3
PRAMEF33
CSMD3
RAET1E
STX18
SOD2
WTAP
INTS9
HMBOX1
ACOX3
TRMT44
MKRN2OS
MKRN2
CNP
RAB18
CITED2
HDDC2
POLR2D
CPT2
SIRT5
SPTBN1
GCLM
CDKAL1
ARHGAP31
TRIP12
FBXO36
SERP1
EIF2A
YPEL2
C10orf95
ZNF599
TIFA
PROSER1
NHLRC3
DSE
MFSD14C
ARSG
TRIM25
PPME1
ERN1
TRIM39-RPP21
TRIM39
TCF4
CEBPG
EPB41
C5orf63
NTAQ1
TSPYL4
SLURP1
GTDC1
PDE4B
CYP19A1
C1QTNF12
SORBS2
KRTAP10-3
ADAMTS6
GBP2
SLCO6A1
PCDHB13
LAMA2
TCL1A
ZNF679
GHITM
SLC25A4
MLEC
MANSC1
BORCS5
KDM3A
STK40
RABEP1
TMEM229B
CDK17
RNF19B
ASNSD1
ASDURF
OCIAD2
BCAP29
KRTAP10-7
KRTAP10-6
PLEKHH1
DSG2
STEAP3
KRTAP4-11
KRTAP4-12
SLC12A5
LRP5
ALPL
TM4SF1
NOTCH2NLB
TMEM70
ELOC
DBP
DPH2
B4GALT2
ATP6V0B
KANSL1
CHD1L
RPS6
RPL11
FKBP1A
RMDN2
C9orf85
ABHD17B
APOLD1
CDKN1B
STRIP2
SPTLC2
VEZF1
MIF
ZNRF2
MARS2
DLGAP4
NOMO1
ATP2A2
PRKAA1
TAPT1
SPX
REST
HTATIP2
PCDHA6
SLC36A3
PCDHA5
AMD1
API5
AMMECR1L
SEPTIN4
PLEKHA8
XPO6
RAD54L
MBTPS1
BLCAP
KAZALD1
NNAT
PARD6B
TAB2
PDCD5
GRK5
ARHGAP29
ZBTB7C
HEXIM2
MUS81
CFL1
ERI1
MAP3K7CL
MRPL2
KLC4
CUL7
CCT8
TOMM34
STK4
CLDN4
SUPT20H
VOPP1
GEMIN4
PRDM2
SPEF2
KRTAP10-5
KRTAP10-4
EYA1
METTL27
VBP1
UNC79
BTBD7
ADCY6
ANO2
TMEM98
THSD7B
PDCD4
MCL1
STX10
IER2
MTERF1
MAP3K5
SCAF4
HSBP1
NUDT18
POLR2K
TXN
FBXO43
ALOX5
SRCIN1
PTPRD
PCDHB6
OR2A7
SPHKAP
NKIRAS1
RDH5
ITGA7
BLOC1S1
WASHC4
ATXN7L2
TRMT1L
SWT1
CREBL2
CYB561D1
LHX9
C1orf53
ADAR
SMC3
MAGI3
HESX1
APPL1
SREBF1
FUCA2
NR1D2
ODC1
CFLAR
C5orf34
ZNF441
TRIM47
ROCK1
PATJ
LGALSL
FOXD4L3
EIF2D
ZFAND5
COG1
MCMBP
CMTM7
IRF2BP2
TBCD
KLHL9
MALL
SLC16A6
LOC389831
NT5C2
SLC25A11
RNF167
PFN1
LRRCC1
ZFHX3
ENO3
NDEL1
ALDH4A1
RTKN2
HOXB9
ZAP70
MICALL2
LRFN1
PTPRN
PEX3
ADAT2
DNM1L
CDK8
RAB1A
SLMAP
KBTBD8
AMOTL2
GAPDH
AP3M2
SAAL1
ANKRD36C
EHD4
NPM1
CCDC57
ELMO2
CEP68
GFOD2
SLC39A8
RPRD1A
TMEM251
MOAP1
FAM86B2
TYMSOS
TYMS
TMEM65
PKD1
SERPINB9
NIBAN1
CD38
TRIM56
NPY4R
XKR6
MUC12
CDYL2
LRRC36
UBE2D3
SPHK2
RPL18
FAM83E
HNRNPL
ARHGAP19
P4HB
AGK
SLC25A36
CLK1
SDCBP
GBE1
PITX3
GBF1
TXNDC12
BTF3L4
NUDT4B
FBXL5
TPGS2
NUDT4
RASAL2
ITSN2
MED13
MKI67
BRD3OS
PM20D2
CASD1
SH3D19
ADNP2
SAMD4A
DOCK5
MAP2
MRAS
MOXD1
ZNF80
PPRC1
NOTCH2
H2BC14
H2AC14
ZER1
RPL6
PTPN11
ARNTL
RPL35
ARPC5L
WDR38
PTPN4
PTP4A1
TBC1D13
DDX42
CCDC47
INTS6
KCTD18
UQCRFS1
GGCT
SMAP2
SMIM19
SLC20A2