ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771664 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◣ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MUC4
SMARCA2
ZBTB8OS
RBBP4
NRG1
ZNF483
BTG2
HOXB1
LRRN1
REST
SMAD7
GAST
CACHD1
AMN1
TMPRSS11E
TERF1
COL17A1
DPPA5
PIM2
SAMHD1
LRRC10B
SPRED2
TENT5B
ECE1
FBXW11
SOX6
MTHFD1L
RMND5B
CD99L2
RNASE6
EDDM3B
FLVCR1
SPATA45
ETV1
METTL11B
SGK1
RPS24
SHCBP1L
ID3
ZSCAN2
HOPX
SALL4
ZNF398
BICD1
LMCD1
DMXL1
CRH
SLA2
ITPRID1
MORF4L2
BCOR
FGD4
BDH1
ZSWIM3
ACOT8
TRAPPC8
FGF1
ID1
CDX2
GDF11
PHC1
PTBP2
MKRN1
ARAP3
TEKT3
OR5AR1
ARHGEF38
ANKRD1
GDF3
SSB
SLTM
DUSP6
ZYG11A
APOBEC3F
FZR1
SFRP2
CRYGB
PUF60
NRBP2
FAM174B
WDR55
DND1
ZFHX3
UHRF1BP1L
TCF7L1
SMPD1
PEAK1
HMG20A
LRRN3
RPH3A
ZNF343
MFSD4B
DNMT3B
TMC5
HESX1
SH3GL1
CHAF1A
SOCS5
NANOG
C9orf85
ABHD17B
RNASET2
JPT1
FGFR2
SLC35A5
ATG3
HSCB
CHEK2
NES
SNRPN
SNURF
TPH2
WFDC8
GXYLT2
IL34
CELF4
NTRK2
KLHL3
LHFPL4
RIPK1
MLEC
SHC1
FLAD1
CKS1B
ENSA
TRIM56
NCDN
KIAA0319L
ATP1A4
DCAF4L1
SLC30A9
GAD2
ZNF18
TIMP4
OR13A1
MTRNR2L8
PARP1
ANKRD10
LARP1B
ANAPC4
VENTX
UTF1
NPSR1
TNNI3K
OR6A2
SYN3
AK4
PREX2
TRPM1
SOX21
RBM22
KLHL7
SHISA5
TREX1
TMEM43
CHCHD4
TARS1
ZBTB40
DDX11
CPA2
DACT1
YIPF4
NLRC4
TDGF1
LRRC2
KDR
TAS2R46
FBP1
RESF1
SOX14
ZNF608
LHPP
TALDO1
CAPN3
RCN1
FAM222B
IFT80
LDB2
ZNF674
GNAI1
FIGNL2
MRPL20
SMC6
GEN1
KIF21A
LIN28B
FZD2
SLC36A2
SLC66A2
HSBP1L1
PYGB
FRAT2
PIPOX
PSIP1
SEC14L5
RASGRF2
CADPS
TRIML2
CCN3
APOBEC3G
GPR31
ZNF436
NBPF15
FOXP4
AEBP2
ZNF296
GEMIN7
PPP1R16B
CSF2RB
FXYD7
PRICKLE1
PTDSS2
MBNL2
GLRA1
SMIM32
SLC23A2
SMPDL3B
CD24
CDC14B
CDC42EP4
FEZF2
MYSM1
L1TD1
ATP8A2
GPR85
GSX2
DRD1
MED12
IL2RG
ABO
ISOC2
UPF1
PPP1R16A
FOXH1
GLI2
WDHD1
SOCS4
BOD1L1
TRPC4AP
TRIM24
CSAD
ZNF740
SYT2
CA6
PDCL
ITGB3
TRIM2
VCAN
GIMAP5
EXT1
FBXL14
HBG2
HBG1
MPP2
AGO1
DGAT2L6
ASH2L
CNGA1
NIPAL1
ABCB5
NXPH1
P2RY12
CCBE1
PSEN2
GLYATL1B
SRCIN1
CNR2
GOLGA6D
TMEM170A
UGT1A6
UGT1A7
TRIT1
NDUFAB1
PALM2AKAP2
FAM98A
TUBB2A
NDUFV1
C10orf95
MFSD13A
S100A11
PCDHB5
PCDHB4
TET3
NAV2
MTM1
LEFTY2
FUS
SLFN12
NFE2L3
PPP2R3A
STON1-GTF2A1L
MAD2L2
DRAXIN
CCDC149
MAD1L1
OBI1
GALNT18
ZNF565
KLF17
ACCS
OR4X1
PITPNM2
NATD1
REV3L
PLSCR4
SNX19
ZNF770
DNMBP
SACS
HOXD11
HOXD13
HOXD12
YAF2
PSMD9
HPD
TMEM98
SLC25A16
DPPA4
BEND3
KRT6B
EOMES
C22orf39
RAD18
RIF1
LONRF3
LYPD6B
KNG1
USP44
PTH1R
SEPTIN5
MT1HL1
ST3GAL6
FGF2
MAGEB2
TBC1D16
BTBD10
IGBP1
C1orf127
SMYD2
PPEF2
ACOXL
MBOAT2
CD82
IRAK1BP1
SMAGP
GCNT2
ANXA2
CEBPZ
FAM20A
GCSAM
GLDC
JAML
TRMT10C
FHL1
CDX4
CER1
PSMG3
CCDC169-SOHLH2
CCDC169
ST18
DHX32
B3GALT5
NACAD
FSTL4
PRRC2B
NECTIN1
ZFP3
FZD8
C16orf78
PAK1
URGCP
URGCP-MRPS24
RASA1
CDYL
SENP2
SOX4
BRDT
SOX2
IL13RA1
CST1
MRS2
ZNF875
ZNF814
NADK
GSTT2B
GSTT2
DDT
SGPP2
ITGB5
ARSL
ELOVL6
OLFML3
MOG
SLC46A1
METTL7A
PPBP
PF4
PALLD
GABRQ
NEUROG1
GABBR1
SLC10A2
SP7
NR5A2
TRIB2
NDST1
MAGEA11
AGK
PCDHGC5
PCDHGC4
PCDHGC3
PDPN
SMN2
SMN1
CERCAM
PCDHB9
PCDHB16
PCDHB8
PCDHB7
PLEKHA5
SAMD5
ZNF781
MEIS2
SERINC5
DIDO1
GID8
PPP2R5A
DNTT
DOK7
LEKR1
IL1A
KNDC1
UBXN10
PLA2G2C
OVCH1
CAAP1
GSN
GBX2
MFHAS1
UQCRHL
FAM180A
LIN28A
INO80D
AGL
PCBP1
DENR
LRAT
VAPB
GPRC5B
CMAS
TMEM47
NSUN4
TTLL4
SOCS3
ICMT
HES3
SCAF4
ZP2
PWWP3A
SEMA6D
ATXN3
PCNX2
PRODH
LOC102724788
SCAP
CAPZA2
ROR1
CCDC13
KIAA0895
MDN1
BIRC6
BCAT1
C5orf60
OLFM2
FGF6
OR5K3
RNASE9
GRIP2
URM1
FGD3
TCP1
MRPL18
ADAMTS16
PNLDC1
RHBDD2
C1orf100
NKIRAS2
DNAJC7
TESK1
CCDC9
PLAAT4
NLRP12
KCNJ1
NANOGNB
CLEC4C
WDR44
ZNF200
AASS
HNRNPA3
ANP32A
TRIM71
PTAR1
AIRE
EPAS1
FOCAD
GUCY2F
ARHGAP22
TMEM167B
WDR49
GABRB3
KCNMB4
GOLGA6A
BUB1
SLC20A2
NEPRO
PHLPP2
SERPINA1
FXYD6-FXYD2
FXYD6
CFLAR
SLC16A12
IRF3
BCL2L12
USP7
SYNPO2
AKAP1
FBXO40
TIAM1
ZIC2
ZIC5
PRDM14
TRIP4
PCLAF
CLPB
CCL2
RNF186
CLDN9
CLDN6
GMCL2
SELPLG
EIF4A2
RMND1
ARMT1
SLC34A1
PFN3
ANKRD40
LUC7L3
IQCF2
REXO4
ADAMTS13
UNC119
WDFY1
KRTAP5-9
KRTAP5-8
PAX6
TRABD2B
MRPS21
SCN5A
POC5
IER5L
KCNIP4
NAA30
ALDH2
KIAA1522
SVOPL
OR2AT4
ASXL3
TP53
WRAP53
MBNL3
STX16
ACSBG2
DDX43
PDK1
PLA2R1
ESX1
OCM
UNC13B
ANK2
ZBTB38
BLCAP
CYP2S1
CHFR
ZNF335
PRR7
ZEB2
LBP
SREBF2
GPM6B
FAM131B
HAND1
GADD45G
DHRS3
DCLK1
RAX
LINGO1
SRSF4
GJA1
MAP6
TCHP
CKAP4
SGMS2
ZXDC
ZNF438
PDE1B
RNF19B
HDAC9
GPR179
SLAMF1
FOXD3
ETV4
MVB12A
SUCO
BST2
HELLS
VANGL1
OAT
ABCA13
ELMO3
KDM2B
CCL26
USP32
MUC1
KCTD7
COL6A2
SYBU
EPB41L1
ZAP70
F11
KLRB1
GOLGA6B
PNRC1
SCGB3A2
MLN
RIMBP2
DNAJC3
SOAT1
PMEPA1
CLIC4
RAC3
DCXR
SPHK1
KMT5C
NCBP3
COX6B2
NAXD
TNFSF8
TRPM3
SLC38A9
PPP1R18
NRM
ZNF318
TRIM16L
PBDC1
KCNN2
ADAR
SPIC
SCARB1
CSHL1
SOX5
B4GALNT2
FBXO38
RFX4
NMNAT2
ARID3B
TBC1D23
LRRC47
ITPK1
GSPT2
SASH1
FYN
PEX12
AP2B1
OCSTAMP
TFAP2B
BARD1
PCSK1
TTC39B
SLC10A6
LOC102723623
GOLGA6L22
AUH
KLHL4
APBA2
PCDH19
GPR149
PLAGL1
TAGLN3
TMEM266
HHIP
TCP11L1
ABCC2
CRYBB1
PDSS2
UTS2R
UGP2
TMPO
CDC42EP3
FGF12
FGF4
ERVH48-1
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
OR6C3
HABP2
HSD17B4
H3C15
H3C14
ATG10
H2AC19
H2AC18
TRIM14
GNAI2
ZBTB45
EPHB3
KANSL1L
CLDN14
STN1
LRGUK
NFKB2
TNK2
MME
CCDC144A
MYF6
MYF5
CCN2
VSIG10
GIGYF1
NBPF12
POU2F3
TNRC6A
PDGFA
ARL17B
ARL17A
GALNT8
ADGRL2
FAM126A
ZC3H12B
NT5DC1
TMEM220
NAA50
ATP6V1A
SQSTM1
MGAT4B
ESRP1
ATP6V1G1
MPZ
SDHC
GOLGA6C
IFITM1
IFITM2
IFITM3
B4GALNT1
PLSCR1
GTF2I
NGRN
DDX46
FAM24B
RGSL1
MAGEB17
KIF19
LRP5L
CHD7
POU5F1
KLHL5
EFNB2
NBPF20
IFNE
NRCAM
ZNF532
EEA1
MOB1A
COMMD7
RAPGEF5
MT1E
FGF13
TNP1
RNF187
CNPY1
LIPK
PRR15
POSTN
CACNA2D1
ZNF536
CCDC33
SHANK2
SPRY2
ZDHHC1
ENKUR
UBR2
KRBA2
ALPL
BRWD3
TBC1D30
TRIM52
SLC5A9
SALL3
PARN
BFAR
RPSA
PRRC2C
DSP
PLA2G2A
SPAG9
ZNF624
APOC1
EFCAB8
CCDC130
ZIC3
SUPT7L
SLC4A1AP
XDH
NUAK1
KRT8
GPSM2
RAD54L2
RASSF8
RPL24
IL22RA2
AADACL3
SULF1
CAPN13
SOX13
SULT6B1
CEBPZOS
FOXA2
EPHA4
C5orf63
SLC35E4
GAS1
PPP1R21
MUC21
MID1
SLC2A11
SPTLC2
FUBP1
DNAJB4
SERPINB8
TMCC1
LIFR
ARID5A
POGLUT2
BIVM
RIC8B
PRDX4
THBS2
NECTIN4
RNASE10
CYP1B1
GOLGA6L1
SMAD3
NRROS
GPC4
ZNF202
JAG1
FZD10
MRGPRX3
THEM5
PDCD1LG2
PHC2
BICRA
NEB
CLEC7A
CDH26
MAGEA10-MAGEA5
MAGEA10
TLL2
CAV3
SLC24A1
INTS14
TTC13
PKIG
FMNL3
SERINC3
LRRC59
SDK2
TSPAN14
GUCY2C
OLIG3
PRUNE2
PBX3
FAM189A2
HLCS
VIM
CCDC85A
CDC25A
PROCR
LRRTM4
GTF3C4
DDX31
EZH1
CYP4A22
MRGPRE
TEAD1
ZNF664-RFLNA
ZNF664
CCDC92
IFIT3
HECW1
JADE1
CDH4
CEP135
CTTN
LRRTM3
FZD5
NKX1-2
SELENOT
AQP2
PHF8
NRIP2
BEND7
CAVIN1
PLIN2
PCGF6
PECAM1
DGAT2
DHDDS
ZNF75D
ETDC
RAP1A
ARHGAP36
TUT4
CREB5
LHX2
DNAJB1
TECR
POMZP3
OR2B3
OR2J1
COL23A1
RBFOX2
HAUS5
ARL15
TCF7L2
RAB15
ZFYVE1
FNTB
ANO10
TBX20
GDF7
ABHD5
C11orf96
BCAN
PHETA2
NAGA
SIN3A
NRG2
VPS37B
MPDU1
LOC100996842
CORO2B
SOX15
GYG1
SLC39A8
IL17RD
ZNF34
STRA6
ZNF517
RPL8
ADNP2
CDH6
MIDEAS
RPRM
VMO1
PSMB6
GLTPD2
ITGA6
DIAPH1
LCA5
PPP1R2
ADA2
VTA1
NMBR
LYPD1
MACROD2
HSD17B2
LFNG
PRSS48
CRTAM
GPR150
LIMCH1
MACROH2A1
ZNF90
MARK2
PCDH1
RIN2
KANK1
NUP205
FGFR4
TESK2
MMACHC
CCDC163
COPZ1
MT1X
MT1H
MT1G
SLC35G3
ZCCHC3