ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771666 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◣ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
ZNF483
LRRN1
SPRED2
MUC4
GAST
BTG2
SMAD7
TERF1
ZBTB8OS
RBBP4
MTHFD1L
TMPRSS11E
ZSCAN2
CD99L2
SOX6
CRH
TENT5B
NRG1
PIM2
DMXL1
FLVCR1
SPATA45
SFRP2
ID3
REST
CACHD1
RPS24
ECE1
LMCD1
HOXB1
SNRPN
SNURF
BCOR
CRYGB
MRPL20
TCF7L1
IFT80
ZNF18
RNASE6
EDDM3B
OR5AR1
MORF4L2
LRRC10B
DCAF4L1
SLC30A9
COL17A1
C9orf85
ABHD17B
FAM174B
SHCBP1L
FGF1
PHC1
SLA2
ABO
CDX2
RMND5B
WDR55
DND1
TRAPPC8
DPPA5
DNMT3B
RNASET2
METTL11B
TNNI3K
LIN28B
PSIP1
ZNF398
APOBEC3F
ZSWIM3
ACOT8
ZYG11A
NTRK2
NBPF15
ZBTB40
PYGB
ZNF343
WFDC8
CELF4
ARHGEF38
ZNF608
LRRN3
MKRN1
SALL4
SLTM
SAMHD1
PUF60
NRBP2
EOMES
TIMP4
GIMAP5
LHFPL4
TRIM2
SSB
ANKRD1
FOXP4
MED12
IL2RG
HOPX
TMEM43
CHCHD4
SH3GL1
CHAF1A
FBP1
FBXW11
PRICKLE1
HSCB
CHEK2
SHC1
FLAD1
CKS1B
FGD4
HESX1
SEC14L5
SLC35A5
ATG3
ITPRID1
LONRF3
VENTX
UTF1
GPR85
ANKRD10
TEKT3
BDH1
SGK1
LEFTY2
RCN1
DOK7
ETV1
GSX2
GDF3
NES
GAD2
BICD1
IL34
CSF2RB
MTRNR2L8
YIPF4
NLRC4
TET3
GALNT18
RPH3A
ID1
OR5K3
GPR31
MFSD4B
FZR1
GDF11
UHRF1BP1L
CPA2
KLHL3
FGFR2
GNAI1
PPEF2
CADPS
OR6A2
DIDO1
GID8
PEAK1
HMG20A
GLI2
FAM222B
ATP1A4
LARP1B
CD24
KLHL7
AK4
RIPK1
HBG2
HBG1
SEMA6D
NANOG
SMC6
GEN1
PARP1
JPT1
SERINC5
PTBP2
TDGF1
LRRC2
DDX11
SMPD1
HOXD11
HOXD13
HOXD12
GLYATL1B
AMN1
SCAF4
IFNE
EXT1
FEZF2
CAPN3
ANAPC4
NXPH1
FSTL4
CCBE1
ARAP3
KDR
RASGRF2
NCDN
KIAA0319L
DUSP6
FZD2
ATXN3
NACAD
TRIM16L
PTDSS2
ENSA
PTAR1
SHISA5
TREX1
SOCS5
SMPDL3B
PRODH
LOC102724788
PSMG3
DRD1
NPSR1
SGPP2
SLC46A1
REV3L
TRIM56
DACT1
PAK1
ABCB5
ACOXL
KLF17
C1orf127
ADAMTS16
CRTAM
GLRA1
FIGNL2
TRPM1
RAX
PSMD9
HPD
L1TD1
SNX19
TUBB2A
FAM20A
SPIC
VCAN
IL13RA1
SACS
NDUFV1
CLDN14
ZNF565
PLSCR4
ANP32A
JAML
ZFHX3
ZNF674
FOXD3
TARS1
SLC66A2
HSBP1L1
OR4X1
ISOC2
PREX2
INO80D
BOD1L1
PLEKHA5
MBNL2
C10orf95
MFSD13A
TMC5
FRAT2
CAAP1
GLDC
IGBP1
UGP2
TPH2
TAS2R46
CA6
PPBP
PF4
CEBPZ
RESF1
PPP1R16B
NLRP12
RAB40AL
MAD2L2
DRAXIN
RAD18
PNRC1
FXYD6-FXYD2
FXYD6
KRT6B
PTH1R
NFE2L3
DGAT2L6
APOBEC3G
NR5A2
TRMT10C
MLEC
LYPD6B
BEND3
C22orf39
PCDHGC5
PCDHGC4
PCDHGC3
PPP1R16A
FOXH1
CSAD
ZNF740
TMEM98
WDR44
CLDN9
CLDN6
POU5F1
GOLGA6D
SYN3
SOX14
SYT2
TRIML2
ATP8A2
DHX32
SLC36A2
SLC23A2
PSEN2
FAM131B
PITPNM2
PWWP3A
ZNF770
AGO1
MAGEA10-MAGEA5
MAGEA10
TCHP
NATD1
GOLGA6C
CD82
KCNJ1
FXYD7
CDC14B
WDHD1
SOCS4
IRAK1BP1
SCGB3A2
H3C15
H3C14
H2AC19
H2AC18
AASS
PIPOX
TESK1
TRIM24
GABRB3
TRIT1
GABBR1
NMNAT2
NEPRO
TALDO1
ITGB5
ZNF781
PCDHB5
PCDHB4
GXYLT2
MT1HL1
TBC1D16
ANXA2
GCNT2
PDCL
SP7
SOX4
GYG1
NAV2
GCSAM
ZNF875
NECTIN1
GPRC5B
MYSM1
CNGA1
NIPAL1
GSN
C5orf63
LEKR1
METTL7A
FZD8
NDUFAB1
GABRQ
KIF21A
C1orf100
CERCAM
CDX4
IRF3
BCL2L12
ZNF296
GEMIN7
PRKG1
NRG2
GJA1
VAPB
KRTAP3-2
KRTAP3-1
ZNF600
VANGL1
MFHAS1
PPP2R3A
RMND1
ARMT1
MT1X
MT1H
MT1G
CDYL
ITGB3
SMIM32
ABCA13
CFAP410
ZNF436
CCN3
MAP6
PPP2R5A
CER1
TMEM70
LY96
ZEB2
SASH1
ATG10
PDK1
MAGEB2
GTF2I
FAM180A
RGSL1
ASH2L
TRPC4AP
ADAMTS1
SLC38A9
KLRB1
SENP2
ZFP3
ACCS
BLCAP
PPP1R15A
PCBP1
CHFR
SRCIN1
PPP1R18
NRM
SOX21
MDN1
KNDC1
KIAA0895
MTM1
RNASE9
LDB2
PALM2AKAP2
ESRP1
NHLH1
REXO4
ADAMTS13
MRS2
ELOVL6
RIN1
FUS
RBM22
ANKRD40
LUC7L3
ZNF438
ALDH1A2
TNK2
CEP135
GOLGA6A
BIRC6
OLFML3
MBOAT2
SCN5A
SEPTIN5
ARSL
PRRC2B
PLA2R1
OCM
RHBDD2
SMIM14
SOX2
CNR2
PCDHB9
PCDHB16
PCDHB8
PCDHB7
RASA1
NSUN4
KRBA2
MSX2
ARHGAP36
DDX43
P2RY12
KNG1
LHPP
MOV10
LRAT
OR13A1
NEB
ZP2
PDGFA
MAD1L1
GBX2
CST1
SELPLG
FBXL14
KIAA1522
EPAS1
MUC1
SREBF2
USP44
FAM98A
RNF186
UBXN10
PLA2G2C
NADK
DDX46
FGF12
ZDHHC14
MEIS2
SMAGP
SAMD5
UQCRHL
YAF2
TMEM170A
OLFM2
B3GALT5
HAND1
TIAM1
POMZP3
RIF1
C5orf60
BCAT1
DNMBP
SMYD2
ESX1
CMAS
SOCS3
KCNIP4
DNAJB1
TECR
TRABD2B
EBF2
EIF4A2
HELLS
IQCF2
KMT5C
COX6B2
TNRC6A
FGD3
DPPA4
AGK
TMPO
SLC34A1
PFN3
ARHGAP22
MYF6
MYF5
PRDM14
TRIP4
PCLAF
GSPT2
CCDC9
ST3GAL6
FGF6
AIRE
PGPEP1
URM1
AGL
ANK2
FOCAD
GUCY2F
NEUROG1
CCL2
CCDC33
NAA30
MAGEA11
B4GALNT2
CYP2S1
NDST1
GPR179
CCDC169-SOHLH2
CCDC169
ZNF200
LYPD1
CCL26
DCLK1
ELMO3
UNC119
OBI1
KCNMB4
CSGALNACT1
RNF19B
LINGO1
DENR
PHETA2
NAGA
HHIP
MPP2
SCARB1
URGCP
URGCP-MRPS24
PRR7
GUCY2C
PTPRN
S100A11
NKIRAS2
DNAJC7
DDX39A
CCDC149
CDC42EP4
PKN1
POU2F3
ASXL3
USP7
SLC25A12
NFKB2
STON1-GTF2A1L
SOAT1
ABL2
UBR2
BEND7
HNRNPA3
VIM
FGF4
FAM200B
TBC1D23
STX16
GDF7
COPZ1
SESTD1
RAPGEF1
PALLD
UGT1A6
UGT1A7
MBNL3
PLAGL1
FHL1
DSP
RAB15
FNTB
PCDHB12
PCDHB14
PCDHB13
UNC13B
TNFSF8
ENKUR
HSPG2
OR2A42
CYP4A22
SYNPO2
RAD54L2
BEST3
NUAK1
TPCN2
MUC3A
UPF1
CRYBB1
OAT
CCDC13
FYN
TFAP2B
TMEM167B
C1orf105
MOG
UTS2R
ETV4
BRWD3
GPC4
ALPL
SLC25A16
FBXO40
TRIB2
BCL2L1
ERVH48-1
KRT8
BICRA
GMCL2
ZNF552
HDAC9
ARID3B
PRR14L
DEPDC5
GPR149
DNTT
CDH26
EFNB2
KAT8
MLN
GSTT2B
GSTT2
DDT
CKAP4
KRTAP5-9
KRTAP5-8
PLAAT4
VOPP1
CLIP2
MTF2
ZNF335
ROR1
RBP3
BLOC1S2
FOXA2
SAV1
JARID2
PCSK1N
ERAS
SLN
PRPF39
PCDH1
UBAP2
HRH2
SYBU
TESK2
MMACHC
CCDC163
KANSL1L
LBP
IFIT3
SPTY2D1
GLIPR2
SERPINA1
PEX12
AP2B1
IL22RA2
SLAMF1
KCTD7
PCGF6
AEBP2
ZNF664-RFLNA
ZNF664
CCDC92
OR6C3
PPAT
PXDC1
OCSTAMP
RYR2
TMEM47
DUSP12
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
MCCC1
BTBD10
CCNT1
TEX49
SIN3A
RIMBP2
MDFIC
TBC1D1
DNAJC3
CCDC130
PARN
BFAR
ZDHHC1
CNPY1
PACSIN2
CHIC1
PCNX2
ZNF814
SVOPL
PBDC1
GRIA3
NBPF20
MIDEAS
DUSP29
ZNF318
BARD1
BRDT
LRRTM4
KHDRBS1
ERICH2
MACROH2A1
AQP2
GIGYF1
IL1A
TMPRSS11F
ACSBG2
WDR49
ARID5A
TRIM71
CCDC144A
SFT2D3
GOLGA6B
ABCC2
SGMS2
POSTN
LIN28A
MVB12A
BST2
OR2AT4
KCNN2
IL17RD
SMN2
SMN1
CAPZA2
RIPOR3
ZNF532
GPR19
SLC66A3
FZD5
PDE1B
DYNLL2
PKIG
HAUS5
SERINC3
ZNF391
GRM4
LIPK
ALDH2
SLC30A3
TRIM54
DNAJC5G
SLFN12
WBP1L
NBPF12
DHRS3
SPRY2
TMEM266
C1QA
SPHK1
KLHL4
LRRC47
LRGUK
NKX1-2
TCP11L1
SERPINB8
SPRY4
TTLL4
PGAP6
SUPT7L
SLC4A1AP
SURF6
PAX6
TCEAL3
DACH2
FMNL3
ASIP
KCNMB2
SCAP
RAC3
DCXR
FGF13
LHX2
SMAD3
USP32
PRMT2
CSHL1
PTF1A
KDM2B
SLC35F6
F11
LHFPL5
CLPS
SERPINB6
PARM1
TSGA10IP
PRUNE2
EPHB3
RIC8B
DEFB107B
DEFB107A
AADACL3
PHF8
FRS2
TMEM63A
LEFTY1
CFLAR
ATP6V1G1
FAM189A2
OR5H1
OR5H14
BUB1
MPDU1
LOC100996842
SOX15
NLGN1
OR6J1
ABCA4
SLC5A9
ARRB2
TCP1
MRPL18
FAM153B
PNLDC1
RNF213
LANCL3
MRGPRE
ZBTB45
TRIM64B
KLF3
ADGRD1
WDFY1
GPM6B
CAVIN3
ZNF34
ZNF517
RPL8
RNF43
LPCAT4
MECOM
PTPRB
MSTO1
TBC1D30
GRIP2
TMEM220
FAM193B
KCNF1
SULT4A1
ICMT
HES3
MARK2
NFIX
SLC39A8
TBCD
FN3K
ZNRF1
KMT2B
ZNF202
TRIM14
TP53
WRAP53
ZIC2
ZIC5
PRORP
PPP2R3C
GPR150
ECHDC1
RPS10-NUDT3
RPS10
HES5
PANK4
KAZN
VSIG10
ATF4
MIEF1
EPB41L1
MPZ
SDHC
GAS1
UBQLN4
LAMTOR2
NUP93
CHRNA9
MYOM1
RPL24
AKAP1
SLC10A6
NCALD
MRTFA
POC5
SLC9A4
ARL15
CCDC54
CYP1B1
COMMD7
PHLPP2
RNASE10
DGKZ
PMEPA1
NAXD
RPL21
CAPN13
OVCH1
TGM7
PHTF1
SLC1A3
C16orf78
FAM89A
MINAR1
GPR160
NT5DC1
ST18
MOB1A
SALL3
CACNA2D1
PLA2G2A
CDC25A
MS4A12
DOCK1
GADD45G
DTX2
PRDX4
THEM5
INTS9
HMBOX1
SMCHD1
SLC7A5
CDC42EP3
LRFN5
SRSF4
GRAMD2B
ZCCHC3
C20orf96
RBFOX2
GCLC
LRRC59
SOX5
PROCR
NDUFA4L2
IGFBP1
LRRC4C
MT1E
MID1
SPIN1